FFCP PHASE1:Mm9::chr12:78083810..78083813,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:78083810..78083813,-|id=chr12:78083810..78083813,-|ontology_enrichment_celltype=CL:0000239!2.78e-22!6;CL:0000677!2.78e-22!6;CL:0000212!2.78e-22!6;CL:0000584!2.78e-22!6;CL:0000075!5.04e-19!7;CL:0002563!1.13e-14!9;CL:0002251!1.13e-14!9;CL:0000473!1.13e-11!3;CL:0000627!1.13e-11!3;CL:0000682!1.13e-11!3;CL:0000066!9.72e-11!25;CL:0002076!1.44e-08!15|ontology_enrichment_celltype_v019_2=CL:0000239,5.25e-30,6;CL:0000677,5.25e-30,6;CL:0000584,5.25e-30,6;CL:0000075,8.27e-26,7;CL:0002563,3.35e-20,9;CL:0002251,3.35e-20,9;CL:0000066,7.05e-16,25;CL:0000682,3.97e-15,3;CL:0002076,2.57e-12,15;CL:0000223,2.44e-09,20;CL:0000473,5.00e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.37e-28!15;UBERON:0001242!4.71e-27!13;UBERON:0000060!4.71e-27!13;UBERON:0001262!4.71e-27!13;UBERON:0004786!4.71e-27!13;UBERON:0000160!1.62e-21!43;UBERON:0005409!7.83e-17!59;UBERON:0004923!9.22e-17!24;UBERON:0003350!1.13e-14!9;UBERON:0004808!1.13e-14!9;UBERON:0001277!1.13e-14!9;UBERON:0000485!6.69e-12!11;UBERON:0000331!2.79e-11!3;UBERON:0002116!2.79e-11!3;UBERON:0001204!2.79e-11!3;UBERON:0001168!2.79e-11!3;UBERON:0001007!8.68e-07!128;UBERON:0001555!8.68e-07!128;UBERON:0007026!8.68e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.46e-21,13;UBERON:0001262,1.46e-21,13;UBERON:0004786,1.46e-21,13;UBERON:0003350,3.35e-20,9;UBERON:0004808,3.35e-20,9;UBERON:0001277,3.35e-20,9;UBERON:0000344,9.81e-19,15;UBERON:0000485,1.26e-16,11;UBERON:0000160,6.17e-13,31;UBERON:0004923,8.18e-12,24;UBERON:0005409,1.51e-08,47|phase1_expression=0,3.48975407639361,5.45999087267443,6.95667686005709,11.0197060588196,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,1.14846392823004,0.430761996159075,1.72376986148711,0.950117097281869,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:78083810..78083813,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:78083810..78083813,- | |||
|id=chr12:78083810..78083813,- | |||
|ontology_enrichment_celltype=CL:0000239!2.78e-22!6;CL:0000677!2.78e-22!6;CL:0000212!2.78e-22!6;CL:0000584!2.78e-22!6;CL:0000075!5.04e-19!7;CL:0002563!1.13e-14!9;CL:0002251!1.13e-14!9;CL:0000473!1.13e-11!3;CL:0000627!1.13e-11!3;CL:0000682!1.13e-11!3;CL:0000066!9.72e-11!25;CL:0002076!1.44e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.25e-30,6;CL:0000677,5.25e-30,6;CL:0000584,5.25e-30,6;CL:0000075,8.27e-26,7;CL:0002563,3.35e-20,9;CL:0002251,3.35e-20,9;CL:0000066,7.05e-16,25;CL:0000682,3.97e-15,3;CL:0002076,2.57e-12,15;CL:0000223,2.44e-09,20;CL:0000473,5.00e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.37e-28!15;UBERON:0001242!4.71e-27!13;UBERON:0000060!4.71e-27!13;UBERON:0001262!4.71e-27!13;UBERON:0004786!4.71e-27!13;UBERON:0000160!1.62e-21!43;UBERON:0005409!7.83e-17!59;UBERON:0004923!9.22e-17!24;UBERON:0003350!1.13e-14!9;UBERON:0004808!1.13e-14!9;UBERON:0001277!1.13e-14!9;UBERON:0000485!6.69e-12!11;UBERON:0000331!2.79e-11!3;UBERON:0002116!2.79e-11!3;UBERON:0001204!2.79e-11!3;UBERON:0001168!2.79e-11!3;UBERON:0001007!8.68e-07!128;UBERON:0001555!8.68e-07!128;UBERON:0007026!8.68e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.46e-21,13;UBERON:0001262,1.46e-21,13;UBERON:0004786,1.46e-21,13;UBERON:0003350,3.35e-20,9;UBERON:0004808,3.35e-20,9;UBERON:0001277,3.35e-20,9;UBERON:0000344,9.81e-19,15;UBERON:0000485,1.26e-16,11;UBERON:0000160,6.17e-13,31;UBERON:0004923,8.18e-12,24;UBERON:0005409,1.51e-08,47 | |||
|phase1_expression=0,3.48975407639361,5.45999087267443,6.95667686005709,11.0197060588196,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45881856213434,1.14846392823004,0.430761996159075,1.72376986148711,0.950117097281869,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0.898819408654221,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:78083810..78083813,- | |||
}} |
Revision as of 23:16, 12 September 2013
Short description: | p@chr12:78083810..78083813, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:78083810..78083813, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.25e-30 | 6 |
gut absorptive cell | 5.25e-30 | 6 |
enterocyte | 5.25e-30 | 6 |
columnar/cuboidal epithelial cell | 8.27e-26 | 7 |
intestinal epithelial cell | 3.35e-20 | 9 |
epithelial cell of alimentary canal | 3.35e-20 | 9 |
epithelial cell | 7.05e-16 | 25 |
M cell of gut | 3.97e-15 | 3 |
endo-epithelial cell | 2.57e-12 | 15 |
endodermal cell | 2.44e-09 | 20 |
defensive cell | 5.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.46e-21 | 13 |
wall of intestine | 1.46e-21 | 13 |
gastrointestinal system mucosa | 1.46e-21 | 13 |
epithelium of mucosa | 3.35e-20 | 9 |
gastrointestinal system epithelium | 3.35e-20 | 9 |
intestinal epithelium | 3.35e-20 | 9 |
mucosa | 9.81e-19 | 15 |
simple columnar epithelium | 1.26e-16 | 11 |
intestine | 6.17e-13 | 31 |
organ component layer | 8.18e-12 | 24 |
gastrointestinal system | 1.51e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.