FFCP PHASE1:Mm9::chr6:146981131..146981147,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66532|HGNC=|MCL_coexpression_id=468|UniProt=Q9D7T1|association_with_transcript=72bp_to_ENSMUST00000036194,NM_025620,uc009esr.1_5end|description=CAGE_peak_2_at_Rep15_5end|id=chr6:146981131..146981147,+|ontology_enrichment_celltype=CL:0002563!3.60e-08!9;CL:0002251!3.60e-08!9;CL:0000473!3.00e-07!3;CL:0000627!3.00e-07!3;CL:0000682!3.00e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,3.52e-12,3;CL:0000239,5.65e-07,6;CL:0000677,5.65e-07,6;CL:0000584,5.65e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.38e-32!59;UBERON:0000160!4.76e-25!43;UBERON:0000344!2.00e-19!15;UBERON:0001242!1.74e-15!13;UBERON:0000060!1.74e-15!13;UBERON:0001262!1.74e-15!13;UBERON:0004786!1.74e-15!13;UBERON:0001007!7.52e-13!128;UBERON:0001555!7.52e-13!128;UBERON:0007026!7.52e-13!128;UBERON:0004119!1.58e-12!130;UBERON:0000925!1.58e-12!130;UBERON:0006595!1.58e-12!130;UBERON:0004923!4.67e-11!24;UBERON:0004921!5.62e-11!126;UBERON:0004185!5.62e-11!126;UBERON:0003350!3.60e-08!9;UBERON:0004808!3.60e-08!9;UBERON:0001277!3.60e-08!9;UBERON:0000331!4.01e-08!3;UBERON:0002116!4.01e-08!3;UBERON:0001204!4.01e-08!3;UBERON:0001168!4.01e-08!3;UBERON:0000945!2.05e-07!16;UBERON:0010039!2.05e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.37e-20,47;UBERON:0000344,2.39e-17,15;UBERON:0000160,2.78e-14,31;UBERON:0000331,8.41e-14,3;UBERON:0002116,8.41e-14,3;UBERON:0001204,8.41e-14,3;UBERON:0001168,8.41e-14,3;UBERON:0001242,1.44e-11,13;UBERON:0001262,1.44e-11,13;UBERON:0004786,1.44e-11,13;UBERON:0002108,1.81e-10,4;UBERON:0004923,2.02e-10,24;UBERON:0001962,2.22e-09,2;UBERON:0001961,2.22e-09,2;UBERON:0001744,2.22e-09,2;UBERON:0001007,1.52e-08,116;UBERON:0001555,1.52e-08,116;UBERON:0007026,1.52e-08,116;UBERON:0004119,2.41e-08,118;UBERON:0000925,2.41e-08,118;UBERON:0006595,2.41e-08,118|phase1_expression=0,1.74487703819681,0,0.90739263392049,0,5.03637815735669,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,3.89995777814189,1.14846392823004,1.29228598847722,2.37018355954478,5.70070258369122,5.29263272495855,3.99114919179548,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.889512175379481,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,1.39269530428806,0.19496408711912,0.898819408654221,1.51296634912286,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0.209088296014469,1.52853794622324,4.31565908431426,2.89287095038676,4.18809507174447,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p2@Rep15}} | ||
|EntrezGene=66532 | |||
|HGNC= | |||
|MCL_coexpression_id=468 | |||
|UniProt=Q9D7T1 | |||
|association_with_transcript=72bp_to_ENSMUST00000036194,NM_025620,uc009esr.1_5end | |||
|description=CAGE_peak_2_at_Rep15_5end | |||
|id=chr6:146981131..146981147,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.60e-08!9;CL:0002251!3.60e-08!9;CL:0000473!3.00e-07!3;CL:0000627!3.00e-07!3;CL:0000682!3.00e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.52e-12,3;CL:0000239,5.65e-07,6;CL:0000677,5.65e-07,6;CL:0000584,5.65e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.38e-32!59;UBERON:0000160!4.76e-25!43;UBERON:0000344!2.00e-19!15;UBERON:0001242!1.74e-15!13;UBERON:0000060!1.74e-15!13;UBERON:0001262!1.74e-15!13;UBERON:0004786!1.74e-15!13;UBERON:0001007!7.52e-13!128;UBERON:0001555!7.52e-13!128;UBERON:0007026!7.52e-13!128;UBERON:0004119!1.58e-12!130;UBERON:0000925!1.58e-12!130;UBERON:0006595!1.58e-12!130;UBERON:0004923!4.67e-11!24;UBERON:0004921!5.62e-11!126;UBERON:0004185!5.62e-11!126;UBERON:0003350!3.60e-08!9;UBERON:0004808!3.60e-08!9;UBERON:0001277!3.60e-08!9;UBERON:0000331!4.01e-08!3;UBERON:0002116!4.01e-08!3;UBERON:0001204!4.01e-08!3;UBERON:0001168!4.01e-08!3;UBERON:0000945!2.05e-07!16;UBERON:0010039!2.05e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.37e-20,47;UBERON:0000344,2.39e-17,15;UBERON:0000160,2.78e-14,31;UBERON:0000331,8.41e-14,3;UBERON:0002116,8.41e-14,3;UBERON:0001204,8.41e-14,3;UBERON:0001168,8.41e-14,3;UBERON:0001242,1.44e-11,13;UBERON:0001262,1.44e-11,13;UBERON:0004786,1.44e-11,13;UBERON:0002108,1.81e-10,4;UBERON:0004923,2.02e-10,24;UBERON:0001962,2.22e-09,2;UBERON:0001961,2.22e-09,2;UBERON:0001744,2.22e-09,2;UBERON:0001007,1.52e-08,116;UBERON:0001555,1.52e-08,116;UBERON:0007026,1.52e-08,116;UBERON:0004119,2.41e-08,118;UBERON:0000925,2.41e-08,118;UBERON:0006595,2.41e-08,118 | |||
|phase1_expression=0,1.74487703819681,0,0.90739263392049,0,5.03637815735669,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19984845586813,3.89995777814189,1.14846392823004,1.29228598847722,2.37018355954478,5.70070258369122,5.29263272495855,3.99114919179548,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.889512175379481,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,1.39269530428806,0.19496408711912,0.898819408654221,1.51296634912286,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0.108005340821801,0.209088296014469,1.52853794622324,4.31565908431426,2.89287095038676,4.18809507174447,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Rep15 | |||
}} |
Revision as of 09:24, 14 September 2013
Short description: | p2@Rep15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rep15_5end |
Coexpression cluster: | MCL_coexpression_mm9:468 |
Association with transcript: | 72bp_to_ENSMUST00000036194, NM_025620, uc009esr.1_5end |
EntrezGene: | Rep15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.52e-12 | 3 |
brush border epithelial cell | 5.65e-07 | 6 |
gut absorptive cell | 5.65e-07 | 6 |
enterocyte | 5.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.37e-20 | 47 |
mucosa | 2.39e-17 | 15 |
intestine | 2.78e-14 | 31 |
ileal mucosa | 8.41e-14 | 3 |
ileum | 8.41e-14 | 3 |
mucosa of small intestine | 8.41e-14 | 3 |
wall of small intestine | 8.41e-14 | 3 |
intestinal mucosa | 1.44e-11 | 13 |
wall of intestine | 1.44e-11 | 13 |
gastrointestinal system mucosa | 1.44e-11 | 13 |
small intestine | 1.81e-10 | 4 |
organ component layer | 2.02e-10 | 24 |
gut-associated lymphoid tissue | 2.22e-09 | 2 |
mucosa-associated lymphoid tissue | 2.22e-09 | 2 |
lymphoid tissue | 2.22e-09 | 2 |
digestive system | 1.52e-08 | 116 |
digestive tract | 1.52e-08 | 116 |
primitive gut | 1.52e-08 | 116 |
endoderm-derived structure | 2.41e-08 | 118 |
endoderm | 2.41e-08 | 118 |
presumptive endoderm | 2.41e-08 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.