FFCP PHASE1:Mm9::chr18:82754558..82754580,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=270|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82754558..82754580,+|id=chr18:82754558..82754580,+|ontology_enrichment_celltype=CL:0000117!2.73e-08!23;CL:0000337!2.73e-08!23;CL:0002614!4.23e-08!3;CL:0002610!8.24e-08!3;CL:0000221!9.16e-08!44;CL:0000133!9.16e-08!44;CL:0002319!6.78e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,1.14e-11,3;CL:0002610,3.19e-11,3;CL:0000117,4.18e-11,23;CL:0000337,4.18e-11,23;CL:0002611,1.87e-08,2;CL:0000540,2.85e-07,33;CL:0000047,2.85e-07,33;CL:0000031,2.85e-07,33;CL:0000404,2.85e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.67e-28!75;UBERON:0001016!2.67e-28!75;UBERON:0001017!1.79e-27!73;UBERON:0005743!1.79e-27!73;UBERON:0001049!8.65e-25!52;UBERON:0005068!8.65e-25!52;UBERON:0006241!8.65e-25!52;UBERON:0007135!8.65e-25!52;UBERON:0000955!7.07e-24!50;UBERON:0006238!7.07e-24!50;UBERON:0002616!2.14e-22!49;UBERON:0004121!2.11e-21!102;UBERON:0000924!2.11e-21!102;UBERON:0006601!2.11e-21!102;UBERON:0000033!8.09e-21!63;UBERON:0002020!1.02e-18!34;UBERON:0002346!9.39e-18!71;UBERON:0003075!9.39e-18!71;UBERON:0007284!9.39e-18!71;UBERON:0002021!1.59e-15!10;UBERON:0000411!1.59e-15!10;UBERON:0001950!1.59e-15!10;UBERON:0002298!5.74e-14!6;UBERON:0003076!7.02e-14!12;UBERON:0003057!7.02e-14!12;UBERON:0007811!2.19e-13!86;UBERON:0002791!2.27e-13!29;UBERON:0003528!2.27e-13!29;UBERON:0001893!2.27e-13!29;UBERON:0003080!2.39e-13!40;UBERON:0002780!3.79e-12!39;UBERON:0001890!3.79e-12!39;UBERON:0006240!3.79e-12!39;UBERON:0000153!1.16e-11!94;UBERON:0003056!2.28e-11!49;UBERON:0002619!1.57e-10!17;UBERON:0002950!7.93e-10!4;UBERON:0001891!7.93e-10!4;UBERON:0009616!7.93e-10!4;UBERON:0000956!8.83e-10!21;UBERON:0001869!8.83e-10!21;UBERON:0000203!8.83e-10!21;UBERON:0002240!1.83e-09!6;UBERON:0005174!1.83e-09!6;UBERON:0001137!1.83e-09!6;UBERON:0000025!1.97e-08!114;UBERON:0004111!3.11e-08!122;UBERON:0002038!4.23e-08!3;UBERON:0002308!4.23e-08!3;UBERON:0009663!4.23e-08!3;UBERON:0009661!4.23e-08!3;UBERON:0006331!4.23e-08!3;UBERON:0000125!4.23e-08!3;UBERON:0004684!8.24e-08!3;UBERON:0002275!8.24e-08!3;UBERON:0001948!1.99e-07!5;UBERON:0002315!1.99e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.13e-32,54;UBERON:0001049,2.76e-27,52;UBERON:0005068,2.76e-27,52;UBERON:0006241,2.76e-27,52;UBERON:0007135,2.76e-27,52;UBERON:0001017,5.36e-27,73;UBERON:0001016,3.68e-26,75;UBERON:0000955,8.41e-22,47;UBERON:0006238,8.41e-22,47;UBERON:0002346,2.13e-21,64;UBERON:0003075,2.13e-21,64;UBERON:0007284,2.13e-21,64;UBERON:0002616,6.50e-20,46;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0002020,3.98e-19,34;UBERON:0010371,3.01e-18,73;UBERON:0003080,1.37e-15,40;UBERON:0002021,1.22e-14,10;UBERON:0000411,1.22e-14,10;UBERON:0001950,1.22e-14,10;UBERON:0002950,2.48e-14,4;UBERON:0001891,2.48e-14,4;UBERON:0009616,2.48e-14,4;UBERON:0010286,2.48e-14,4;UBERON:0003528,4.02e-14,29;UBERON:0002791,4.02e-14,29;UBERON:0001893,4.02e-14,29;UBERON:0002780,6.39e-14,39;UBERON:0001890,6.39e-14,39;UBERON:0006240,6.39e-14,39;UBERON:0010314,1.30e-13,92;UBERON:0003076,1.59e-13,12;UBERON:0003057,1.59e-13,12;UBERON:0003056,3.48e-12,49;UBERON:0002038,1.14e-11,3;UBERON:0009663,1.14e-11,3;UBERON:0009661,1.14e-11,3;UBERON:0000125,1.14e-11,3;UBERON:0002308,1.14e-11,3;UBERON:0004684,3.19e-11,3;UBERON:0002275,3.19e-11,3;UBERON:0002619,8.11e-11,17;UBERON:0000025,3.63e-10,114;UBERON:0002240,1.27e-09,6;UBERON:0005174,1.27e-09,6;UBERON:0001137,1.27e-09,6;UBERON:0004111,3.22e-09,122;UBERON:0000956,1.52e-08,21;UBERON:0001869,1.52e-08,21;UBERON:0000203,1.52e-08,21;UBERON:0002256,1.87e-08,2;UBERON:0001896,4.89e-08,2;UBERON:0002298,4.89e-08,2;UBERON:0005290,4.89e-08,2;UBERON:0010096,4.89e-08,2;UBERON:0011216,2.75e-07,194;UBERON:0002420,2.85e-07,8;UBERON:0007245,2.85e-07,8;UBERON:0010009,2.85e-07,8;UBERON:0010011,2.85e-07,8;UBERON:0000454,2.85e-07,8;UBERON:0001948,8.22e-07,5;UBERON:0002315,8.22e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,9.14083150092171,7.95126747425809,0,0,0,4.40463523997555,6.12899222808901,4.14737639791857,0,0,0,15.9134309430787,7.31591393041184,5.04234217663473,0.589257170947335,1.28134512719193,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,3.14170060220183,0,0,0,0,1.49790639404823,1.83000241127451,0,0.347648640384553,0.511430914660661,3.53239675751252,3.89379031362618,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,4.17431533968259,6.09500770279457,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.60660658210904,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:82754558..82754580,+ | |||
|id=chr18:82754558..82754580,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.73e-08!23;CL:0000337!2.73e-08!23;CL:0002614!4.23e-08!3;CL:0002610!8.24e-08!3;CL:0000221!9.16e-08!44;CL:0000133!9.16e-08!44;CL:0002319!6.78e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.14e-11,3;CL:0002610,3.19e-11,3;CL:0000117,4.18e-11,23;CL:0000337,4.18e-11,23;CL:0002611,1.87e-08,2;CL:0000540,2.85e-07,33;CL:0000047,2.85e-07,33;CL:0000031,2.85e-07,33;CL:0000404,2.85e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.67e-28!75;UBERON:0001016!2.67e-28!75;UBERON:0001017!1.79e-27!73;UBERON:0005743!1.79e-27!73;UBERON:0001049!8.65e-25!52;UBERON:0005068!8.65e-25!52;UBERON:0006241!8.65e-25!52;UBERON:0007135!8.65e-25!52;UBERON:0000955!7.07e-24!50;UBERON:0006238!7.07e-24!50;UBERON:0002616!2.14e-22!49;UBERON:0004121!2.11e-21!102;UBERON:0000924!2.11e-21!102;UBERON:0006601!2.11e-21!102;UBERON:0000033!8.09e-21!63;UBERON:0002020!1.02e-18!34;UBERON:0002346!9.39e-18!71;UBERON:0003075!9.39e-18!71;UBERON:0007284!9.39e-18!71;UBERON:0002021!1.59e-15!10;UBERON:0000411!1.59e-15!10;UBERON:0001950!1.59e-15!10;UBERON:0002298!5.74e-14!6;UBERON:0003076!7.02e-14!12;UBERON:0003057!7.02e-14!12;UBERON:0007811!2.19e-13!86;UBERON:0002791!2.27e-13!29;UBERON:0003528!2.27e-13!29;UBERON:0001893!2.27e-13!29;UBERON:0003080!2.39e-13!40;UBERON:0002780!3.79e-12!39;UBERON:0001890!3.79e-12!39;UBERON:0006240!3.79e-12!39;UBERON:0000153!1.16e-11!94;UBERON:0003056!2.28e-11!49;UBERON:0002619!1.57e-10!17;UBERON:0002950!7.93e-10!4;UBERON:0001891!7.93e-10!4;UBERON:0009616!7.93e-10!4;UBERON:0000956!8.83e-10!21;UBERON:0001869!8.83e-10!21;UBERON:0000203!8.83e-10!21;UBERON:0002240!1.83e-09!6;UBERON:0005174!1.83e-09!6;UBERON:0001137!1.83e-09!6;UBERON:0000025!1.97e-08!114;UBERON:0004111!3.11e-08!122;UBERON:0002038!4.23e-08!3;UBERON:0002308!4.23e-08!3;UBERON:0009663!4.23e-08!3;UBERON:0009661!4.23e-08!3;UBERON:0006331!4.23e-08!3;UBERON:0000125!4.23e-08!3;UBERON:0004684!8.24e-08!3;UBERON:0002275!8.24e-08!3;UBERON:0001948!1.99e-07!5;UBERON:0002315!1.99e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.13e-32,54;UBERON:0001049,2.76e-27,52;UBERON:0005068,2.76e-27,52;UBERON:0006241,2.76e-27,52;UBERON:0007135,2.76e-27,52;UBERON:0001017,5.36e-27,73;UBERON:0001016,3.68e-26,75;UBERON:0000955,8.41e-22,47;UBERON:0006238,8.41e-22,47;UBERON:0002346,2.13e-21,64;UBERON:0003075,2.13e-21,64;UBERON:0007284,2.13e-21,64;UBERON:0002616,6.50e-20,46;UBERON:0004121,1.01e-19,95;UBERON:0000924,1.01e-19,95;UBERON:0006601,1.01e-19,95;UBERON:0002020,3.98e-19,34;UBERON:0010371,3.01e-18,73;UBERON:0003080,1.37e-15,40;UBERON:0002021,1.22e-14,10;UBERON:0000411,1.22e-14,10;UBERON:0001950,1.22e-14,10;UBERON:0002950,2.48e-14,4;UBERON:0001891,2.48e-14,4;UBERON:0009616,2.48e-14,4;UBERON:0010286,2.48e-14,4;UBERON:0003528,4.02e-14,29;UBERON:0002791,4.02e-14,29;UBERON:0001893,4.02e-14,29;UBERON:0002780,6.39e-14,39;UBERON:0001890,6.39e-14,39;UBERON:0006240,6.39e-14,39;UBERON:0010314,1.30e-13,92;UBERON:0003076,1.59e-13,12;UBERON:0003057,1.59e-13,12;UBERON:0003056,3.48e-12,49;UBERON:0002038,1.14e-11,3;UBERON:0009663,1.14e-11,3;UBERON:0009661,1.14e-11,3;UBERON:0000125,1.14e-11,3;UBERON:0002308,1.14e-11,3;UBERON:0004684,3.19e-11,3;UBERON:0002275,3.19e-11,3;UBERON:0002619,8.11e-11,17;UBERON:0000025,3.63e-10,114;UBERON:0002240,1.27e-09,6;UBERON:0005174,1.27e-09,6;UBERON:0001137,1.27e-09,6;UBERON:0004111,3.22e-09,122;UBERON:0000956,1.52e-08,21;UBERON:0001869,1.52e-08,21;UBERON:0000203,1.52e-08,21;UBERON:0002256,1.87e-08,2;UBERON:0001896,4.89e-08,2;UBERON:0002298,4.89e-08,2;UBERON:0005290,4.89e-08,2;UBERON:0010096,4.89e-08,2;UBERON:0011216,2.75e-07,194;UBERON:0002420,2.85e-07,8;UBERON:0007245,2.85e-07,8;UBERON:0010009,2.85e-07,8;UBERON:0010011,2.85e-07,8;UBERON:0000454,2.85e-07,8;UBERON:0001948,8.22e-07,5;UBERON:0002315,8.22e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,0.384218305321555,0,0,0,9.14083150092171,7.95126747425809,0,0,0,4.40463523997555,6.12899222808901,4.14737639791857,0,0,0,15.9134309430787,7.31591393041184,5.04234217663473,0.589257170947335,1.28134512719193,0,0.454357159999104,0,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,3.14170060220183,0,0,0,0,1.49790639404823,1.83000241127451,0,0.347648640384553,0.511430914660661,3.53239675751252,3.89379031362618,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0,0,0,4.17431533968259,6.09500770279457,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,1.54667864109319,2.05524755931193,2.2661816921691,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |||
|short_description=p@chr18:82754558..82754580,+ | |||
}} |
Revision as of 16:53, 13 September 2013
Short description: | p@chr18:82754558..82754580, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82754558..82754580, + |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.14e-11 | 3 |
raphe nuclei neuron | 3.19e-11 | 3 |
CNS neuron (sensu Vertebrata) | 4.18e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-11 | 23 |
neuron of the dorsal spinal cord | 1.87e-08 | 2 |
neuron | 2.85e-07 | 33 |
neuronal stem cell | 2.85e-07 | 33 |
neuroblast | 2.85e-07 | 33 |
electrically signaling cell | 2.85e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.