FFCP PHASE1:Mm9::chr10:127675090..127675125,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100504989,21853|HGNC=|MCL_coexpression_id=477|UniProt=Q9R1X4|association_with_transcript=0bp_to_ENSMUST00000105245,NM_011589,uc007hlx.2_5end|description=CAGE_peak_7_at_LOC100504989_5end,CAGE_peak_7_at_Timeless_5end|id=chr10:127675090..127675125,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001894!1.06e-17!10;UBERON:0006222!1.06e-17!10;UBERON:0000007!2.26e-17!8;UBERON:0003296!2.26e-17!8;UBERON:0010133!2.26e-17!8;UBERON:0002346!5.47e-10!71;UBERON:0003075!5.47e-10!71;UBERON:0007284!5.47e-10!71;UBERON:0002616!1.33e-09!49;UBERON:0000955!2.42e-09!50;UBERON:0006238!2.42e-09!50;UBERON:0000033!6.53e-09!63;UBERON:0002780!3.96e-08!39;UBERON:0001890!3.96e-08!39;UBERON:0006240!3.96e-08!39;UBERON:0003080!7.33e-08!40;UBERON:0001049!1.30e-07!52;UBERON:0005068!1.30e-07!52;UBERON:0006241!1.30e-07!52;UBERON:0007135!1.30e-07!52;UBERON:0004121!2.74e-07!102;UBERON:0000924!2.74e-07!102;UBERON:0006601!2.74e-07!102;UBERON:0003056!4.60e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.71e-65,8;UBERON:0003296,3.71e-65,8;UBERON:0010133,3.71e-65,8;UBERON:0001894,2.77e-52,10;UBERON:0006222,2.77e-52,10;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002368,3.96e-09,60;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002530,1.88e-08,65;UBERON:0000949,1.17e-07,72;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0.304465478312141,0,0.301445281105245,0,0.628332956648377,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,3.62204314591713,4.92975180572662,7.09360934569094,8.20496560969525,6.41741180348272,7.61162372786498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@LOC100504989,p7@Timeless}} | ||
|EntrezGene=100504989,21853 | |||
|HGNC= | |||
|MCL_coexpression_id=477 | |||
|UniProt=Q9R1X4 | |||
|association_with_transcript=0bp_to_ENSMUST00000105245,NM_011589,uc007hlx.2_5end | |||
|description=CAGE_peak_7_at_LOC100504989_5end,CAGE_peak_7_at_Timeless_5end | |||
|id=chr10:127675090..127675125,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!1.06e-17!10;UBERON:0006222!1.06e-17!10;UBERON:0000007!2.26e-17!8;UBERON:0003296!2.26e-17!8;UBERON:0010133!2.26e-17!8;UBERON:0002346!5.47e-10!71;UBERON:0003075!5.47e-10!71;UBERON:0007284!5.47e-10!71;UBERON:0002616!1.33e-09!49;UBERON:0000955!2.42e-09!50;UBERON:0006238!2.42e-09!50;UBERON:0000033!6.53e-09!63;UBERON:0002780!3.96e-08!39;UBERON:0001890!3.96e-08!39;UBERON:0006240!3.96e-08!39;UBERON:0003080!7.33e-08!40;UBERON:0001049!1.30e-07!52;UBERON:0005068!1.30e-07!52;UBERON:0006241!1.30e-07!52;UBERON:0007135!1.30e-07!52;UBERON:0004121!2.74e-07!102;UBERON:0000924!2.74e-07!102;UBERON:0006601!2.74e-07!102;UBERON:0003056!4.60e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.71e-65,8;UBERON:0003296,3.71e-65,8;UBERON:0010133,3.71e-65,8;UBERON:0001894,2.77e-52,10;UBERON:0006222,2.77e-52,10;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002368,3.96e-09,60;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002530,1.88e-08,65;UBERON:0000949,1.17e-07,72;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.742210695324124,0,0.304465478312141,0,0.301445281105245,0,0.628332956648377,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,3.62204314591713,4.92975180572662,7.09360934569094,8.20496560969525,6.41741180348272,7.61162372786498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@LOC100504989,p7@Timeless | |||
}} |
Revision as of 16:08, 12 September 2013
Short description: | p7@LOC100504989, p7@Timeless |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LOC100504989_5end, CAGE_peak_7_at_Timeless_5end |
Coexpression cluster: | MCL_coexpression_mm9:477 |
Association with transcript: | 0bp_to_ENSMUST00000105245, NM_011589, uc007hlx.2_5end |
EntrezGene: | 100504989,21853 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.71e-65 | 8 |
gland of diencephalon | 3.71e-65 | 8 |
neuroendocrine gland | 3.71e-65 | 8 |
diencephalon | 2.77e-52 | 10 |
future diencephalon | 2.77e-52 | 10 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
endocrine gland | 3.96e-09 | 60 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
gland | 1.88e-08 | 65 |
endocrine system | 1.17e-07 | 72 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.