FFCP PHASE1:Mm9::chr5:112688342..112688357,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=133|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:112688342..112688357,+|id=chr5:112688342..112688357,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!7.87e-28!9;UBERON:0000019!7.87e-28!9;UBERON:0000047!7.87e-28!9;UBERON:0004088!7.87e-28!9;UBERON:0002104!7.87e-28!9;UBERON:0001456!7.87e-28!9;UBERON:0003072!7.87e-28!9;UBERON:0003071!7.87e-28!9;UBERON:0004128!7.87e-28!9;UBERON:0001444!1.46e-22!11;UBERON:0000020!1.39e-20!12;UBERON:0001032!1.39e-20!12;UBERON:0004456!1.39e-20!12;UBERON:0005085!6.54e-19!13;UBERON:0003056!8.53e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,1.82168620147785,3.90833577536904,8.28285797104606,3.76762044589288,4.28629944653366,5.25266253167884,5.528401749024,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr5:112688342..112688357,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=133 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:112688342..112688357,+ | |||
|id=chr5:112688342..112688357,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!7.87e-28!9;UBERON:0000019!7.87e-28!9;UBERON:0000047!7.87e-28!9;UBERON:0004088!7.87e-28!9;UBERON:0002104!7.87e-28!9;UBERON:0001456!7.87e-28!9;UBERON:0003072!7.87e-28!9;UBERON:0003071!7.87e-28!9;UBERON:0004128!7.87e-28!9;UBERON:0001444!1.46e-22!11;UBERON:0000020!1.39e-20!12;UBERON:0001032!1.39e-20!12;UBERON:0004456!1.39e-20!12;UBERON:0005085!6.54e-19!13;UBERON:0003056!8.53e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,1.82168620147785,3.90833577536904,8.28285797104606,3.76762044589288,4.28629944653366,5.25266253167884,5.528401749024,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr5:112688342..112688357,+ | |||
}} |
Revision as of 05:58, 14 September 2013
Short description: | p@chr5:112688342..112688357, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:112688342..112688357, + |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.97e-77 | 9 |
camera-type eye | 4.97e-77 | 9 |
simple eye | 4.97e-77 | 9 |
immature eye | 4.97e-77 | 9 |
ocular region | 4.97e-77 | 9 |
visual system | 4.97e-77 | 9 |
face | 4.97e-77 | 9 |
optic cup | 4.97e-77 | 9 |
optic vesicle | 4.97e-77 | 9 |
eye primordium | 4.97e-77 | 9 |
subdivision of head | 4.29e-63 | 11 |
sense organ | 7.26e-58 | 12 |
sensory system | 7.26e-58 | 12 |
entire sense organ system | 7.26e-58 | 12 |
head | 1.94e-53 | 13 |
ectodermal placode | 1.94e-53 | 13 |
craniocervical region | 2.05e-19 | 36 |
anterior region of body | 2.91e-16 | 43 |
pre-chordal neural plate | 2.84e-14 | 49 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.