FFCP PHASE1:Mm9::chr6:106699166..106699200,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16192|HGNC=|MCL_coexpression_id=18|UniProt=P21183,Q05A81|association_with_transcript=-135bp_to_NM_008370,uc009dcx.1,uc012epx.1_5end|description=CAGE_peak_2_at_Il5ra_5end|id=chr6:106699166..106699200,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.28e-17,6;CL:0000556,1.28e-17,6;CL:0000050,7.72e-12,9;CL:0000839,2.93e-08,13;CL:0000945,6.29e-08,1;CL:0000236,6.29e-08,1;CL:0000826,6.29e-08,1;CL:0000763,9.67e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.19e-22!29;UBERON:0002193!7.29e-20!48;UBERON:0002390!1.56e-19!45;UBERON:0003061!1.56e-19!45;UBERON:0003408!1.10e-16!24;UBERON:0002370!3.02e-15!23;UBERON:0000974!3.02e-15!23;UBERON:0004807!3.02e-15!23;UBERON:0005058!3.02e-15!23;UBERON:0003351!3.02e-15!23;UBERON:0009113!3.02e-15!23;UBERON:0003295!3.02e-15!23;UBERON:0009722!3.02e-15!23;UBERON:0005562!3.02e-15!23;UBERON:0007690!3.02e-15!23;UBERON:0002405!5.37e-15!70;UBERON:0006562!1.88e-14!24;UBERON:0001557!1.88e-14!24;UBERON:0001042!1.88e-14!24;UBERON:0008814!1.88e-14!24;UBERON:0009145!1.88e-14!24;UBERON:0005057!5.97e-14!51;UBERON:0003081!8.53e-14!88;UBERON:0000072!2.01e-12!27;UBERON:0001004!1.04e-11!42;UBERON:0000065!1.21e-10!41;UBERON:0000063!4.67e-10!35;UBERON:0001041!2.52e-08!92;UBERON:0002106!2.86e-08!6;UBERON:0004457!2.86e-08!6;UBERON:0000042!2.86e-08!6;UBERON:0004854!2.86e-08!6;UBERON:0009034!2.86e-08!6;UBERON:0002095!2.86e-08!6;UBERON:0004782!2.86e-08!6;UBERON:0003281!2.86e-08!6;UBERON:0009664!2.86e-08!6;UBERON:0002296!2.86e-08!6;UBERON:0005602!2.86e-08!6;UBERON:0001179!2.86e-08!6;UBERON:0006293!2.86e-08!6;UBERON:0003104!9.77e-08!131;UBERON:0009142!9.77e-08!131;UBERON:0002529!9.93e-08!6;UBERON:0000077!1.46e-07!97;UBERON:0005911!9.24e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.85e-18,48;UBERON:0002405,9.85e-18,48;UBERON:0002390,8.13e-16,45;UBERON:0003061,8.13e-16,45;UBERON:0004177,5.32e-10,29;UBERON:0005057,5.32e-10,29;UBERON:0002106,5.47e-10,6;UBERON:0004457,5.47e-10,6;UBERON:0000042,5.47e-10,6;UBERON:0004854,5.47e-10,6;UBERON:0009034,5.47e-10,6;UBERON:0002095,5.47e-10,6;UBERON:0004782,5.47e-10,6;UBERON:0003281,5.47e-10,6;UBERON:0009664,5.47e-10,6;UBERON:0002296,5.47e-10,6;UBERON:0005602,5.47e-10,6;UBERON:0001179,5.47e-10,6;UBERON:0006293,5.47e-10,6;UBERON:0000077,3.45e-08,35;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0003081,1.45e-07,87;UBERON:0002371,9.67e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,1.21485160433896,0,9.46386496074713,8.08975158273859,4.66828616977833,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,4.14300613835475,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.185194527369712,1.31857919903284,2.05041341581538,2.51655990527175,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,2.98817892848929,1.79026695667481,1.58945083825012,0.841368146639782,0.295379054349154,0.706765149637033,0.762068066549998,0.403304740547362,1.07203668813728,0.577271049841977,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0.463735671240843|short_description=p2@Il5ra}} | ||
|EntrezGene=16192 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=P21183,Q05A81 | |||
|association_with_transcript=-135bp_to_NM_008370,uc009dcx.1,uc012epx.1_5end | |||
|description=CAGE_peak_2_at_Il5ra_5end | |||
|id=chr6:106699166..106699200,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.28e-17,6;CL:0000556,1.28e-17,6;CL:0000050,7.72e-12,9;CL:0000839,2.93e-08,13;CL:0000945,6.29e-08,1;CL:0000236,6.29e-08,1;CL:0000826,6.29e-08,1;CL:0000763,9.67e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.19e-22!29;UBERON:0002193!7.29e-20!48;UBERON:0002390!1.56e-19!45;UBERON:0003061!1.56e-19!45;UBERON:0003408!1.10e-16!24;UBERON:0002370!3.02e-15!23;UBERON:0000974!3.02e-15!23;UBERON:0004807!3.02e-15!23;UBERON:0005058!3.02e-15!23;UBERON:0003351!3.02e-15!23;UBERON:0009113!3.02e-15!23;UBERON:0003295!3.02e-15!23;UBERON:0009722!3.02e-15!23;UBERON:0005562!3.02e-15!23;UBERON:0007690!3.02e-15!23;UBERON:0002405!5.37e-15!70;UBERON:0006562!1.88e-14!24;UBERON:0001557!1.88e-14!24;UBERON:0001042!1.88e-14!24;UBERON:0008814!1.88e-14!24;UBERON:0009145!1.88e-14!24;UBERON:0005057!5.97e-14!51;UBERON:0003081!8.53e-14!88;UBERON:0000072!2.01e-12!27;UBERON:0001004!1.04e-11!42;UBERON:0000065!1.21e-10!41;UBERON:0000063!4.67e-10!35;UBERON:0001041!2.52e-08!92;UBERON:0002106!2.86e-08!6;UBERON:0004457!2.86e-08!6;UBERON:0000042!2.86e-08!6;UBERON:0004854!2.86e-08!6;UBERON:0009034!2.86e-08!6;UBERON:0002095!2.86e-08!6;UBERON:0004782!2.86e-08!6;UBERON:0003281!2.86e-08!6;UBERON:0009664!2.86e-08!6;UBERON:0002296!2.86e-08!6;UBERON:0005602!2.86e-08!6;UBERON:0001179!2.86e-08!6;UBERON:0006293!2.86e-08!6;UBERON:0003104!9.77e-08!131;UBERON:0009142!9.77e-08!131;UBERON:0002529!9.93e-08!6;UBERON:0000077!1.46e-07!97;UBERON:0005911!9.24e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.85e-18,48;UBERON:0002405,9.85e-18,48;UBERON:0002390,8.13e-16,45;UBERON:0003061,8.13e-16,45;UBERON:0004177,5.32e-10,29;UBERON:0005057,5.32e-10,29;UBERON:0002106,5.47e-10,6;UBERON:0004457,5.47e-10,6;UBERON:0000042,5.47e-10,6;UBERON:0004854,5.47e-10,6;UBERON:0009034,5.47e-10,6;UBERON:0002095,5.47e-10,6;UBERON:0004782,5.47e-10,6;UBERON:0003281,5.47e-10,6;UBERON:0009664,5.47e-10,6;UBERON:0002296,5.47e-10,6;UBERON:0005602,5.47e-10,6;UBERON:0001179,5.47e-10,6;UBERON:0006293,5.47e-10,6;UBERON:0000077,3.45e-08,35;UBERON:0000029,8.50e-08,1;UBERON:0001097,8.50e-08,1;UBERON:0003968,8.50e-08,1;UBERON:0001467,8.50e-08,1;UBERON:0003081,1.45e-07,87;UBERON:0002371,9.67e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,1.21485160433896,0,9.46386496074713,8.08975158273859,4.66828616977833,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0,4.14300613835475,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.185194527369712,1.31857919903284,2.05041341581538,2.51655990527175,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.308132871494482,2.98817892848929,1.79026695667481,1.58945083825012,0.841368146639782,0.295379054349154,0.706765149637033,0.762068066549998,0.403304740547362,1.07203668813728,0.577271049841977,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0.463735671240843 | |||
|short_description=p2@Il5ra | |||
}} |
Revision as of 08:27, 14 September 2013
Short description: | p2@Il5ra |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Il5ra_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -135bp_to_NM_008370, uc009dcx.1, uc012epx.1_5end |
EntrezGene: | Il5ra |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.28e-17 | 6 |
megakaryocyte | 1.28e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 7.72e-12 | 9 |
myeloid lineage restricted progenitor cell | 2.93e-08 | 13 |
lymphocyte of B lineage | 6.29e-08 | 1 |
B cell | 6.29e-08 | 1 |
pro-B cell | 6.29e-08 | 1 |
myeloid cell | 9.67e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.85e-18 | 48 |
immune system | 9.85e-18 | 48 |
hematopoietic system | 8.13e-16 | 45 |
blood island | 8.13e-16 | 45 |
hemopoietic organ | 5.32e-10 | 29 |
immune organ | 5.32e-10 | 29 |
spleen | 5.47e-10 | 6 |
cavity lining | 5.47e-10 | 6 |
serous membrane | 5.47e-10 | 6 |
gastrointestinal system mesentery | 5.47e-10 | 6 |
stomach region | 5.47e-10 | 6 |
mesentery | 5.47e-10 | 6 |
gastrointestinal system serosa | 5.47e-10 | 6 |
mesentery of stomach | 5.47e-10 | 6 |
gut mesentery | 5.47e-10 | 6 |
dorsal mesentery | 5.47e-10 | 6 |
dorsal mesogastrium | 5.47e-10 | 6 |
peritoneal cavity | 5.47e-10 | 6 |
spleen primordium | 5.47e-10 | 6 |
mixed endoderm/mesoderm-derived structure | 3.45e-08 | 35 |
lymph node | 8.50e-08 | 1 |
axillary lymph node | 8.50e-08 | 1 |
peripheral lymph node | 8.50e-08 | 1 |
shoulder | 8.50e-08 | 1 |
lateral plate mesoderm | 1.45e-07 | 87 |
bone marrow | 9.67e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.