FFCP PHASE1:Mm9::chr11:34214757..34214786,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=574403|HGNC=|MCL_coexpression_id=251|UniProt=Q6GQV1|association_with_transcript=-35bp_to_ENSMUST00000093192,ENSMUST00000165963,NM_001025382,uc011xsz.1_5end|description=CAGE_peak_1_at_Fam196b_5end|id=chr11:34214757..34214786,+|ontology_enrichment_celltype=CL:0000117!7.29e-13!23;CL:0000337!7.29e-13!23;CL:0000540!3.64e-07!33;CL:0000047!3.64e-07!33;CL:0000031!3.64e-07!33;CL:0000404!3.64e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.95e-21,23;CL:0000337,4.95e-21,23;CL:0000540,5.55e-15,33;CL:0000047,5.55e-15,33;CL:0000031,5.55e-15,33;CL:0000404,5.55e-15,33;CL:0000221,9.30e-13,44;CL:0000133,9.30e-13,44;CL:0000393,6.38e-12,39;CL:0000211,6.38e-12,39;CL:0002319,1.13e-11,43;CL:0002321,6.50e-07,70;CL:0002613,7.68e-07,3;CL:0002610,9.13e-07,3;CL:0002612,9.96e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.37e-16!63;UBERON:0001049!1.00e-14!52;UBERON:0005068!1.00e-14!52;UBERON:0006241!1.00e-14!52;UBERON:0007135!1.00e-14!52;UBERON:0001017!1.46e-14!73;UBERON:0005743!1.46e-14!73;UBERON:0000073!1.31e-13!75;UBERON:0001016!1.31e-13!75;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0002346!3.63e-13!71;UBERON:0003075!3.63e-13!71;UBERON:0007284!3.63e-13!71;UBERON:0002616!9.55e-13!49;UBERON:0003056!2.88e-12!49;UBERON:0004121!7.87e-12!102;UBERON:0000924!7.87e-12!102;UBERON:0006601!7.87e-12!102;UBERON:0000153!4.50e-10!94;UBERON:0003080!8.00e-10!40;UBERON:0002780!3.73e-09!39;UBERON:0001890!3.73e-09!39;UBERON:0006240!3.73e-09!39;UBERON:0007811!2.02e-08!86;UBERON:0002020!3.84e-08!34;UBERON:0002420!8.44e-07!8;UBERON:0007245!8.44e-07!8;UBERON:0010009!8.44e-07!8;UBERON:0010011!8.44e-07!8;UBERON:0000454!8.44e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.31e-19,73;UBERON:0001016,7.44e-19,75;UBERON:0004121,1.57e-16,95;UBERON:0000924,1.57e-16,95;UBERON:0006601,1.57e-16,95;UBERON:0000073,2.69e-16,54;UBERON:0001049,5.80e-14,52;UBERON:0005068,5.80e-14,52;UBERON:0006241,5.80e-14,52;UBERON:0007135,5.80e-14,52;UBERON:0002346,2.03e-12,64;UBERON:0003075,2.03e-12,64;UBERON:0007284,2.03e-12,64;UBERON:0010371,2.53e-12,73;UBERON:0003076,6.22e-12,12;UBERON:0003057,6.22e-12,12;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0002420,2.38e-11,8;UBERON:0007245,2.38e-11,8;UBERON:0010009,2.38e-11,8;UBERON:0010011,2.38e-11,8;UBERON:0000454,2.38e-11,8;UBERON:0001948,6.76e-10,5;UBERON:0002315,6.76e-10,5;UBERON:0000369,1.16e-09,5;UBERON:0002435,1.16e-09,5;UBERON:0000204,1.16e-09,5;UBERON:0010082,1.16e-09,5;UBERON:0000955,7.08e-09,47;UBERON:0006238,7.08e-09,47;UBERON:0010314,2.42e-08,92;UBERON:0002616,6.95e-08,46;UBERON:0002020,8.84e-08,34;UBERON:0004684,9.13e-07,3;UBERON:0002275,9.13e-07,3;UBERON:0002257,9.96e-07,3|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.7609188134483,2.53532561402472,0,0,0,0,0,0,0,0.311068836925433,0,0,2.57085885963423,3.53389665522582,0.857435594504678,1.24599112323707,0.919218786610021,5.50579404996943,3.95830748064082,3.22573719838111,3.82470234417562,6.22115976496386,3.64639359389732,3.90856198601933,0.56276261003168,4.12555268997387,6.18720029494702,5.69486723196412,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,0.41889341362691,0,0,0,0,7.04016005202667,2.28750301409313,1.50785222535437,0.173824320192276,0.767146371990992,5.194701113989,2.59586020908412,0.203678727700633,0.124406970610093,1.0108910337347,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.512454881139399,0.562210347358373,1.81092359517311,0.862271971731369,1.89106080167819,1.23165786914764,1.31517439456545,1.39023624612799,0,0.411564272815887,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0.308713837137853,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0,0.569003702859245,0.456994050438915,1.1270773567308,0.814605311381257,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,3.53211297973142,3.8679856575427,0,0.252470927204373,0,0,0,0,0,0,0,0,0,12.2102100240287,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,0,0,3.74483566329167,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.329098041204242,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,1.25452977608681,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,1.99512436700516,1.02440163452481,1.21553358534147,0.209613162627982,0.919217542250071,0.222246727801615,1.23621034343337,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,0.842773567228942,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.77163688185482,0.824171801606613,0.883193520806384,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.658765662907314,0.507687647350059,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p1@Fam196b}} | ||
|EntrezGene=574403 | |||
|HGNC= | |||
|MCL_coexpression_id=251 | |||
|UniProt=Q6GQV1 | |||
|association_with_transcript=-35bp_to_ENSMUST00000093192,ENSMUST00000165963,NM_001025382,uc011xsz.1_5end | |||
|description=CAGE_peak_1_at_Fam196b_5end | |||
|id=chr11:34214757..34214786,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.29e-13!23;CL:0000337!7.29e-13!23;CL:0000540!3.64e-07!33;CL:0000047!3.64e-07!33;CL:0000031!3.64e-07!33;CL:0000404!3.64e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.95e-21,23;CL:0000337,4.95e-21,23;CL:0000540,5.55e-15,33;CL:0000047,5.55e-15,33;CL:0000031,5.55e-15,33;CL:0000404,5.55e-15,33;CL:0000221,9.30e-13,44;CL:0000133,9.30e-13,44;CL:0000393,6.38e-12,39;CL:0000211,6.38e-12,39;CL:0002319,1.13e-11,43;CL:0002321,6.50e-07,70;CL:0002613,7.68e-07,3;CL:0002610,9.13e-07,3;CL:0002612,9.96e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.37e-16!63;UBERON:0001049!1.00e-14!52;UBERON:0005068!1.00e-14!52;UBERON:0006241!1.00e-14!52;UBERON:0007135!1.00e-14!52;UBERON:0001017!1.46e-14!73;UBERON:0005743!1.46e-14!73;UBERON:0000073!1.31e-13!75;UBERON:0001016!1.31e-13!75;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0002346!3.63e-13!71;UBERON:0003075!3.63e-13!71;UBERON:0007284!3.63e-13!71;UBERON:0002616!9.55e-13!49;UBERON:0003056!2.88e-12!49;UBERON:0004121!7.87e-12!102;UBERON:0000924!7.87e-12!102;UBERON:0006601!7.87e-12!102;UBERON:0000153!4.50e-10!94;UBERON:0003080!8.00e-10!40;UBERON:0002780!3.73e-09!39;UBERON:0001890!3.73e-09!39;UBERON:0006240!3.73e-09!39;UBERON:0007811!2.02e-08!86;UBERON:0002020!3.84e-08!34;UBERON:0002420!8.44e-07!8;UBERON:0007245!8.44e-07!8;UBERON:0010009!8.44e-07!8;UBERON:0010011!8.44e-07!8;UBERON:0000454!8.44e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.31e-19,73;UBERON:0001016,7.44e-19,75;UBERON:0004121,1.57e-16,95;UBERON:0000924,1.57e-16,95;UBERON:0006601,1.57e-16,95;UBERON:0000073,2.69e-16,54;UBERON:0001049,5.80e-14,52;UBERON:0005068,5.80e-14,52;UBERON:0006241,5.80e-14,52;UBERON:0007135,5.80e-14,52;UBERON:0002346,2.03e-12,64;UBERON:0003075,2.03e-12,64;UBERON:0007284,2.03e-12,64;UBERON:0010371,2.53e-12,73;UBERON:0003076,6.22e-12,12;UBERON:0003057,6.22e-12,12;UBERON:0002240,1.11e-11,6;UBERON:0005174,1.11e-11,6;UBERON:0001137,1.11e-11,6;UBERON:0002420,2.38e-11,8;UBERON:0007245,2.38e-11,8;UBERON:0010009,2.38e-11,8;UBERON:0010011,2.38e-11,8;UBERON:0000454,2.38e-11,8;UBERON:0001948,6.76e-10,5;UBERON:0002315,6.76e-10,5;UBERON:0000369,1.16e-09,5;UBERON:0002435,1.16e-09,5;UBERON:0000204,1.16e-09,5;UBERON:0010082,1.16e-09,5;UBERON:0000955,7.08e-09,47;UBERON:0006238,7.08e-09,47;UBERON:0010314,2.42e-08,92;UBERON:0002616,6.95e-08,46;UBERON:0002020,8.84e-08,34;UBERON:0004684,9.13e-07,3;UBERON:0002275,9.13e-07,3;UBERON:0002257,9.96e-07,3 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.7609188134483,2.53532561402472,0,0,0,0,0,0,0,0.311068836925433,0,0,2.57085885963423,3.53389665522582,0.857435594504678,1.24599112323707,0.919218786610021,5.50579404996943,3.95830748064082,3.22573719838111,3.82470234417562,6.22115976496386,3.64639359389732,3.90856198601933,0.56276261003168,4.12555268997387,6.18720029494702,5.69486723196412,1.86399445825301,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.92780797011547,0.41889341362691,0,0,0,0,7.04016005202667,2.28750301409313,1.50785222535437,0.173824320192276,0.767146371990992,5.194701113989,2.59586020908412,0.203678727700633,0.124406970610093,1.0108910337347,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.512454881139399,0.562210347358373,1.81092359517311,0.862271971731369,1.89106080167819,1.23165786914764,1.31517439456545,1.39023624612799,0,0.411564272815887,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0.308713837137853,0,0.264450566663544,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0,0,0.569003702859245,0.456994050438915,1.1270773567308,0.814605311381257,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,3.53211297973142,3.8679856575427,0,0.252470927204373,0,0,0,0,0,0,0,0,0,12.2102100240287,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0,0,0,0,3.74483566329167,0.18006109403131,0.776152102696527,0.857348140126369,0.532020700926821,1.42695054081656,0.329098041204242,0.913394847343798,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,1.25452977608681,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.515559547031063,0,0,0,0,0.453142408984205,0.51776031175182,0.31136204275253,1.99512436700516,1.02440163452481,1.21553358534147,0.209613162627982,0.919217542250071,0.222246727801615,1.23621034343337,0.962757628775446,0.505394423527595,0.760437899670719,1.13175804831646,0.842773567228942,0.640251524048693,0.402048282689293,1.42888107384922,0.347652977834566,0.77163688185482,0.824171801606613,0.883193520806384,1.02860775715625,0.70990322463735,0.476872379894642,0.290692833264657,0.658765662907314,0.507687647350059,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.935726433781634,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Fam196b | |||
}} |
Revision as of 19:33, 12 September 2013
Short description: | p1@Fam196b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam196b_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | -35bp_to_ENSMUST00000093192, ENSMUST00000165963, NM_001025382, uc011xsz.1_5end |
EntrezGene: | Fam196b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.95e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.95e-21 | 23 |
neuron | 5.55e-15 | 33 |
neuronal stem cell | 5.55e-15 | 33 |
neuroblast | 5.55e-15 | 33 |
electrically signaling cell | 5.55e-15 | 33 |
ectodermal cell | 9.30e-13 | 44 |
neurectodermal cell | 9.30e-13 | 44 |
electrically responsive cell | 6.38e-12 | 39 |
electrically active cell | 6.38e-12 | 39 |
neural cell | 1.13e-11 | 43 |
embryonic cell | 6.50e-07 | 70 |
striatum neuron | 7.68e-07 | 3 |
raphe nuclei neuron | 9.13e-07 | 3 |
neuron of the ventral spinal cord | 9.96e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.