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FFCP PHASE1:Mm9::chr4:153673960..153674028,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=230972|HGNC=|MCL_coexpression_id=12|UniProt=B1ASH7,Q3U5C8|association_with_transcript=0bp_to_ENSMUST00000144145,ENSMUST00000154895,NM_001112744,uc008wbr.2_5end|description=CAGE_peak_1_at_Arhgef16_5end|id=chr4:153673960..153674028,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,9.73e-07,9;CL:0002251,9.73e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.23e-24!130;UBERON:0000925!4.23e-24!130;UBERON:0006595!4.23e-24!130;UBERON:0001007!6.66e-23!128;UBERON:0001555!6.66e-23!128;UBERON:0007026!6.66e-23!128;UBERON:0004921!1.37e-21!126;UBERON:0004185!1.37e-21!126;UBERON:0000160!1.71e-21!43;UBERON:0005409!3.83e-21!59;UBERON:0000344!6.91e-10!15;UBERON:0001242!1.23e-08!13;UBERON:0000060!1.23e-08!13;UBERON:0001262!1.23e-08!13;UBERON:0004786!1.23e-08!13;UBERON:0000077!6.31e-08!97;UBERON:0002108!4.50e-07!16;UBERON:0001041!8.19e-07!92;UBERON:0004923!9.28e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.48e-21,118;UBERON:0000925,1.48e-21,118;UBERON:0006595,1.48e-21,118;UBERON:0001007,2.28e-20,116;UBERON:0001555,2.28e-20,116;UBERON:0007026,2.28e-20,116;UBERON:0004921,4.58e-19,114;UBERON:0000160,5.85e-19,31;UBERON:0005409,4.15e-18,47;UBERON:0000344,1.43e-10,15;UBERON:0001242,3.22e-09,13;UBERON:0001262,3.22e-09,13;UBERON:0004786,3.22e-09,13;UBERON:0001008,2.38e-07,19;UBERON:0006554,3.00e-07,18;UBERON:0004923,3.37e-07,24;UBERON:0005177,5.33e-07,79;UBERON:0003350,9.73e-07,9;UBERON:0004808,9.73e-07,9;UBERON:0001277,9.73e-07,9|phase1_expression=1.60148847104794,40.1321718785265,50.5049155722385,32.6661348211376,43.5779285053322,35.4225263734088,25.6973904655078,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,5.01755411891312,0,0,30.5585527535407,33.0349364736725,38.4735415957064,31.0148637234534,32.3206849028834,24.7030445293286,22.1786514188739,24.1686256614282,0,0,0,8.37669697278696,9.47537478543406,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,7.24661221754194,0.860423876981386,1.3599426674155,2.15881276655127,1.94932925234301,0.448026887097336,3.93244376368905,0,0,0,7.74638808771743,0,0,0,12.5564803786504,14.1881524666055,12.1325866803548,7.30776830201984,0,0.148442139064825,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,0.940709657085638,0.502666365318702,39.3039998697654,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,27.9587641827183,0,0,48.0259263792152,0,0,0,0.149790639404823,0,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,2.24046600470696,2.11491850037158,13.1415834385511,2.52530227063769,1.04096354370163,0.689706313300419,0.360124259610698,0.452114453507145,0.408218994907967,0.512454881139399,0.655912071918102,0.258703370739016,1.07783996466421,1.13463648100692,1.05570674498369,0.657587197282725,0.556094498451196,1.39300866608867,0.823128545631774,3.18454826909589,0,0,0,1.03562886267751,0.469052119962192,0,1.18372367792605,0,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.730999937126662,0.219550115291051,0.268412837520744,0.210289948564127,0,77.9788327841763,23.2716498663919,2.13288250535234,4.64473343720877,14.0465532841082,19.7649854130876,18.4573776391242,19.9736907418187,31.3189180619378,24.2107463444296,18.3474702424197,26.6601672535142,22.8107981929371,32.357498711552,28.5302225834596,30.0703322614094,9.10405924574792,6.28366819353509,15.7790829942313,12.0154283428735,11.4431967428899,11.9932252012445,14.8605862242005,17.5656076095727,13.9728867778824,14.5608653427725,4.15033677922008,1.50160595144485,2.55526693647164,1.57403478669398,3.44862206360455,4.58236603529592,3.8193877767213,4.60313819921297,1.94562272130042,2.19649130550465,2.87536413054709,4.83783231969054,3.12037673114561,1.51547326768267,1.4351793081753,1.4473305640901,4.61882975416512,1.32643988239339,3.91115943460862,3.90413697282933,5.39787571063555,7.70528784232352,8.09348379012447,7.02481132288076,2.83743259391144,4.87222317227305,2.39182152986231,2.62181303545181,2.07221978239075,4.48412081602686,0,0,5.90117127622843,3.58717770196152,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,1.72338718186239,0.716906393857656,1.11399337041197,0.849229592366497,0.809621403349789,0.876767573733936,1.18586333383957,3.21321316421807,2.55492153374884,3.91744328067962,1.30309567482861,1.97964147567043,3.98235415019888,8.74010290157933,12.09294227859,7.35559811048003,12.4026795009925,7.378443550654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|EntrezGene=230972
|HGNC=
|MCL_coexpression_id=12
|UniProt=B1ASH7,Q3U5C8
|association_with_transcript=0bp_to_ENSMUST00000144145,ENSMUST00000154895,NM_001112744,uc008wbr.2_5end
|description=CAGE_peak_1_at_Arhgef16_5end
|id=chr4:153673960..153674028,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,9.73e-07,9;CL:0002251,9.73e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.23e-24!130;UBERON:0000925!4.23e-24!130;UBERON:0006595!4.23e-24!130;UBERON:0001007!6.66e-23!128;UBERON:0001555!6.66e-23!128;UBERON:0007026!6.66e-23!128;UBERON:0004921!1.37e-21!126;UBERON:0004185!1.37e-21!126;UBERON:0000160!1.71e-21!43;UBERON:0005409!3.83e-21!59;UBERON:0000344!6.91e-10!15;UBERON:0001242!1.23e-08!13;UBERON:0000060!1.23e-08!13;UBERON:0001262!1.23e-08!13;UBERON:0004786!1.23e-08!13;UBERON:0000077!6.31e-08!97;UBERON:0002108!4.50e-07!16;UBERON:0001041!8.19e-07!92;UBERON:0004923!9.28e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.48e-21,118;UBERON:0000925,1.48e-21,118;UBERON:0006595,1.48e-21,118;UBERON:0001007,2.28e-20,116;UBERON:0001555,2.28e-20,116;UBERON:0007026,2.28e-20,116;UBERON:0004921,4.58e-19,114;UBERON:0000160,5.85e-19,31;UBERON:0005409,4.15e-18,47;UBERON:0000344,1.43e-10,15;UBERON:0001242,3.22e-09,13;UBERON:0001262,3.22e-09,13;UBERON:0004786,3.22e-09,13;UBERON:0001008,2.38e-07,19;UBERON:0006554,3.00e-07,18;UBERON:0004923,3.37e-07,24;UBERON:0005177,5.33e-07,79;UBERON:0003350,9.73e-07,9;UBERON:0004808,9.73e-07,9;UBERON:0001277,9.73e-07,9
|phase1_expression=1.60148847104794,40.1321718785265,50.5049155722385,32.6661348211376,43.5779285053322,35.4225263734088,25.6973904655078,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,5.01755411891312,0,0,30.5585527535407,33.0349364736725,38.4735415957064,31.0148637234534,32.3206849028834,24.7030445293286,22.1786514188739,24.1686256614282,0,0,0,8.37669697278696,9.47537478543406,13.4751775133164,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,0,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.279182999001381,0,0.61119299110724,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,7.24661221754194,0.860423876981386,1.3599426674155,2.15881276655127,1.94932925234301,0.448026887097336,3.93244376368905,0,0,0,7.74638808771743,0,0,0,12.5564803786504,14.1881524666055,12.1325866803548,7.30776830201984,0,0.148442139064825,0.693941307064543,0.913396434936424,0.691846491768175,0.60289056221049,0.940709657085638,0.502666365318702,39.3039998697654,0.578397427679647,0,0.161766849947409,0.441683036920787,0.484875253135222,27.9587641827183,0,0,48.0259263792152,0,0,0,0.149790639404823,0,0.376963056338593,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,2.24046600470696,2.11491850037158,13.1415834385511,2.52530227063769,1.04096354370163,0.689706313300419,0.360124259610698,0.452114453507145,0.408218994907967,0.512454881139399,0.655912071918102,0.258703370739016,1.07783996466421,1.13463648100692,1.05570674498369,0.657587197282725,0.556094498451196,1.39300866608867,0.823128545631774,3.18454826909589,0,0,0,1.03562886267751,0.469052119962192,0,1.18372367792605,0,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.730999937126662,0.219550115291051,0.268412837520744,0.210289948564127,0,77.9788327841763,23.2716498663919,2.13288250535234,4.64473343720877,14.0465532841082,19.7649854130876,18.4573776391242,19.9736907418187,31.3189180619378,24.2107463444296,18.3474702424197,26.6601672535142,22.8107981929371,32.357498711552,28.5302225834596,30.0703322614094,9.10405924574792,6.28366819353509,15.7790829942313,12.0154283428735,11.4431967428899,11.9932252012445,14.8605862242005,17.5656076095727,13.9728867778824,14.5608653427725,4.15033677922008,1.50160595144485,2.55526693647164,1.57403478669398,3.44862206360455,4.58236603529592,3.8193877767213,4.60313819921297,1.94562272130042,2.19649130550465,2.87536413054709,4.83783231969054,3.12037673114561,1.51547326768267,1.4351793081753,1.4473305640901,4.61882975416512,1.32643988239339,3.91115943460862,3.90413697282933,5.39787571063555,7.70528784232352,8.09348379012447,7.02481132288076,2.83743259391144,4.87222317227305,2.39182152986231,2.62181303545181,2.07221978239075,4.48412081602686,0,0,5.90117127622843,3.58717770196152,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,1.72338718186239,0.716906393857656,1.11399337041197,0.849229592366497,0.809621403349789,0.876767573733936,1.18586333383957,3.21321316421807,2.55492153374884,3.91744328067962,1.30309567482861,1.97964147567043,3.98235415019888,8.74010290157933,12.09294227859,7.35559811048003,12.4026795009925,7.37844355065426,9.04499026088774,6.5436071305951,8.55593708123331,4.42451461110142,9.48767477174989,13.4076206222643,3.74483566329167,4.50152735078276,5.56242340265844,3.64372959553707,2.48276327099183,1.78368817602071,2.30368628842969,0.608929898229199,11.0295702789944,47.8740480152234,4.6310963591542,1.81374878235628,1.77610869365496,2.29189114726992,2.74556391207214,1.47726809770555,29.1480836629851,0.370850604021019,0.170870880797853,1.23832120777933,0.555583582109135,0.188368457004691,0,0,0,0.139951452323658,0,40.0961659566348,4.58687190692646,6.30290348093231,10.3685127188929,11.2907679847813,11.5732158785474,14.0258920240214,12.7286321817017,19.6316956488022,24.6268449254406,4.34937519160848,0,0.448549638131936,0.165458490457098,0.388902376688095,1.03327858782185,0.168956125490778,0.938857909166032,1.3020438484395,0.838874755405687,0.483168241652012,0.576060012515731,2.52808896502543,7.70355818102624,9.65482997349376,5.45667456506739,7.34009452236674,3.17890167650024,4.68762253127878,4.72606486958647,3.93769154797776,2.89585865288999,2.52065462842101,1.8516997340553,1.92423683280659,2.68816875017609,1.81384306892169,8.65745218158852,4.66512054369274,26.1900001527962,2.70465431645067,13.3254557570339,12.8206136987086,3.85863082342319,6.52043735245972,0,0,0,0,0,0,0,0,0,0.51776031175182,1.03787347584177,1.59609949360412,1.36586884603307,1.94485373654635,1.46729213839588,2.20612210140017,3.33370091702423,3.91466608753899,3.85103051510178,3.28506375292937,1.77435509923168,2.26351609663291,3.55837728385553,2.88113185821912,2.46972516509137,4.76293691283074,2.66533949673168,3.08654752741928,2.88460130562315,4.12156976376312,3.42869252385415,3.01708870470874,2.86123427936785,2.47088908274958,2.54095327121393,3.13074049199203,3.10977553883713,3.41990624869196,4.07412341537585,5.05028044491965,2.01679530811096,2.9551344712669,1.63692417267876,3.40861050609125,2.3148793317737,1.49886346762768,2.10538447600868,1.93383948643468,0.956441660344217,1.10295709559758,1.39120701372253
|short_description=p1@Arhgef16
}}

Revision as of 04:37, 14 September 2013

Short description:p1@Arhgef16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef16_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000144145, ENSMUST00000154895, NM_001112744, uc008wbr.2_5end
EntrezGene:Arhgef16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I650.50
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I735.42
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D233.03
GP2+ M cell, pool1.CNhs13228.11845-124H938.47
GP2+ M cell, pool2.CNhs13231.11846-124I131.01
GP2+ M cell, pool3.CNhs13240.11847-124I232.32
Ileum epithelium, pool1.CNhs13199.10252-104B924.70
Ileum epithelium, pool2.CNhs13232.10253-104C122.18
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A839.30
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H748.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B213.14
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I377.98
intestine, adult.CNhs10496.178-9A323.27
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D814.05
intestine, embryo E16.CNhs10585.463-22H419.76
intestine, embryo E17.CNhs10582.482-18D318.46
intestine, embryo E18.CNhs10526.1289-20F719.97
intestine, neonate N00.CNhs11126.644-26D131.32
intestine, neonate N01.CNhs11192.1322-23E924.21
intestine, neonate N06.CNhs11102.688-20B818.35
intestine, neonate N07.CNhs11095.720-20F226.66
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E328.53
intestine, neonate N30.CNhs11131.1384-42G130.07
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G711.99
kidney, neonate N10.CNhs11206.758-6D514.86
kidney, neonate N20.CNhs11113.832-19I117.57
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H114.56
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G347.87
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I129.15
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H640.10
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D410.37
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B814.03
stomach, neonate N07.CNhs11210.718-18A912.73
stomach, neonate N25.CNhs11104.1355-25E419.63
stomach, neonate N30.CNhs11134.1386-42I124.63
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I29.65
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C17.34
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.19
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F513.33
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell9.73e-079
epithelial cell of alimentary canal9.73e-079







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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