FFCP PHASE1:Mm9::chr10:4922158..4922168,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=96|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:4922158..4922168,+|id=chr10:4922158..4922168,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,9.25e-15,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.50e-12!22;UBERON:0007499!1.50e-12!22;UBERON:0006925!1.50e-12!22;UBERON:0009497!1.50e-12!22;UBERON:0000015!1.50e-12!22;UBERON:0002423!1.50e-12!22;UBERON:0006235!1.50e-12!22;UBERON:0008835!1.50e-12!22;UBERON:0003894!1.50e-12!22;UBERON:0004161!1.50e-12!22;UBERON:0008836!1.50e-12!22;UBERON:0009854!6.78e-12!23;UBERON:0009856!6.78e-12!23;UBERON:0002365!9.66e-11!25;UBERON:0002330!9.66e-11!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.90e-36,22;UBERON:0007499,8.90e-36,22;UBERON:0006925,8.90e-36,22;UBERON:0009497,8.90e-36,22;UBERON:0000015,8.90e-36,22;UBERON:0002423,8.90e-36,22;UBERON:0006235,8.90e-36,22;UBERON:0008835,8.90e-36,22;UBERON:0003894,8.90e-36,22;UBERON:0004161,8.90e-36,22;UBERON:0008836,8.90e-36,22;UBERON:0009854,3.34e-34,23;UBERON:0009856,3.34e-34,23;UBERON:0002365,1.98e-31,25;UBERON:0002330,1.98e-31,25;UBERON:0005256,3.23e-17,45;UBERON:0003914,1.86e-16,47;UBERON:0005172,9.26e-16,49;UBERON:0005173,9.26e-16,49;UBERON:0002417,9.26e-16,49;UBERON:0000916,9.26e-16,49;UBERON:0003929,5.72e-14,55;UBERON:0000949,9.10e-13,72;UBERON:0002368,9.52e-13,60;UBERON:0003104,1.58e-12,61;UBERON:0009142,1.58e-12,61;UBERON:0002530,1.03e-11,65;UBERON:0005177,1.43e-11,79;UBERON:0000490,1.59e-11,66;UBERON:0009569,1.59e-11,66;UBERON:0005911,5.44e-11,69;UBERON:0002100,4.62e-10,90;UBERON:0001041,2.25e-09,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.151143120213571,0,0,0,2.69851595818909,3.89865850468601,1.79210754838934,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0,1.92192989231657,5.75072826109418,9.67566463938109,8.7370548472077,6.56705082662491,6.63770430031075,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.578574190077352,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr10:4922158..4922168,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=96 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:4922158..4922168,+ | |||
|id=chr10:4922158..4922168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.25e-15,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.50e-12!22;UBERON:0007499!1.50e-12!22;UBERON:0006925!1.50e-12!22;UBERON:0009497!1.50e-12!22;UBERON:0000015!1.50e-12!22;UBERON:0002423!1.50e-12!22;UBERON:0006235!1.50e-12!22;UBERON:0008835!1.50e-12!22;UBERON:0003894!1.50e-12!22;UBERON:0004161!1.50e-12!22;UBERON:0008836!1.50e-12!22;UBERON:0009854!6.78e-12!23;UBERON:0009856!6.78e-12!23;UBERON:0002365!9.66e-11!25;UBERON:0002330!9.66e-11!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.90e-36,22;UBERON:0007499,8.90e-36,22;UBERON:0006925,8.90e-36,22;UBERON:0009497,8.90e-36,22;UBERON:0000015,8.90e-36,22;UBERON:0002423,8.90e-36,22;UBERON:0006235,8.90e-36,22;UBERON:0008835,8.90e-36,22;UBERON:0003894,8.90e-36,22;UBERON:0004161,8.90e-36,22;UBERON:0008836,8.90e-36,22;UBERON:0009854,3.34e-34,23;UBERON:0009856,3.34e-34,23;UBERON:0002365,1.98e-31,25;UBERON:0002330,1.98e-31,25;UBERON:0005256,3.23e-17,45;UBERON:0003914,1.86e-16,47;UBERON:0005172,9.26e-16,49;UBERON:0005173,9.26e-16,49;UBERON:0002417,9.26e-16,49;UBERON:0000916,9.26e-16,49;UBERON:0003929,5.72e-14,55;UBERON:0000949,9.10e-13,72;UBERON:0002368,9.52e-13,60;UBERON:0003104,1.58e-12,61;UBERON:0009142,1.58e-12,61;UBERON:0002530,1.03e-11,65;UBERON:0005177,1.43e-11,79;UBERON:0000490,1.59e-11,66;UBERON:0009569,1.59e-11,66;UBERON:0005911,5.44e-11,69;UBERON:0002100,4.62e-10,90;UBERON:0001041,2.25e-09,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.151143120213571,0,0,0,2.69851595818909,3.89865850468601,1.79210754838934,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.889357881261447,0,0,0,0,0,0,0,0,1.92192989231657,5.75072826109418,9.67566463938109,8.7370548472077,6.56705082662491,6.63770430031075,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.578574190077352,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr10:4922158..4922168,+ | |||
}} |
Revision as of 16:50, 12 September 2013
Short description: | p@chr10:4922158..4922168, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:4922158..4922168, + |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.25e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 8.90e-36 | 22 |
epithelial sac | 8.90e-36 | 22 |
digestive gland | 8.90e-36 | 22 |
epithelium of foregut-midgut junction | 8.90e-36 | 22 |
anatomical boundary | 8.90e-36 | 22 |
hepatobiliary system | 8.90e-36 | 22 |
foregut-midgut junction | 8.90e-36 | 22 |
hepatic diverticulum | 8.90e-36 | 22 |
liver primordium | 8.90e-36 | 22 |
septum transversum | 8.90e-36 | 22 |
liver bud | 8.90e-36 | 22 |
digestive tract diverticulum | 3.34e-34 | 23 |
sac | 3.34e-34 | 23 |
exocrine gland | 1.98e-31 | 25 |
exocrine system | 1.98e-31 | 25 |
trunk mesenchyme | 3.23e-17 | 45 |
epithelial tube | 1.86e-16 | 47 |
abdomen element | 9.26e-16 | 49 |
abdominal segment element | 9.26e-16 | 49 |
abdominal segment of trunk | 9.26e-16 | 49 |
abdomen | 9.26e-16 | 49 |
gut epithelium | 5.72e-14 | 55 |
endocrine system | 9.10e-13 | 72 |
endocrine gland | 9.52e-13 | 60 |
mesenchyme | 1.58e-12 | 61 |
entire embryonic mesenchyme | 1.58e-12 | 61 |
gland | 1.03e-11 | 65 |
trunk region element | 1.43e-11 | 79 |
unilaminar epithelium | 1.59e-11 | 66 |
subdivision of trunk | 1.59e-11 | 66 |
endo-epithelium | 5.44e-11 | 69 |
trunk | 4.62e-10 | 90 |
foregut | 2.25e-09 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.