FFCP PHASE1:Mm9::chr10:50689167..50689171,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=514|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:50689167..50689171,+|id=chr10:50689167..50689171,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.02e-16!14;UBERON:0003918!1.02e-16!14;UBERON:0005095!1.02e-16!14;UBERON:0007687!1.02e-16!14;UBERON:0006554!3.93e-16!16;UBERON:0001008!6.69e-15!17;UBERON:0000489!4.04e-11!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.23e-58,14;UBERON:0003918,6.23e-58,14;UBERON:0011143,6.23e-58,14;UBERON:0005095,6.23e-58,14;UBERON:0007687,6.23e-58,14;UBERON:0006554,6.90e-45,18;UBERON:0001008,1.75e-42,19;UBERON:0000489,2.33e-38,21;UBERON:0003103,2.94e-18,43;UBERON:0005172,6.76e-16,49;UBERON:0005173,6.76e-16,49;UBERON:0002417,6.76e-16,49;UBERON:0000916,6.76e-16,49;UBERON:0005177,2.05e-13,79;UBERON:0003104,1.48e-12,61;UBERON:0009142,1.48e-12,61;UBERON:0002100,1.25e-11,90;UBERON:0009569,1.60e-11,66;UBERON:0000998,6.57e-08,1;UBERON:0007194,6.57e-08,1;UBERON:0006868,6.57e-08,1;UBERON:0000080,7.72e-08,4;UBERON:0005904,7.72e-08,4;UBERON:0006947,7.72e-08,4;UBERON:0002120,7.72e-08,4;UBERON:0004054,7.72e-08,4;UBERON:0004875,7.72e-08,4;UBERON:0004876,7.72e-08,4;UBERON:0005721,7.72e-08,4;UBERON:0005754,7.72e-08,4;UBERON:0007297,7.72e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.509196819251581,0.995255764880744,4.80173241023982,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,2.62771579002376,1.1270773567308,3.46207257337034,3.29719228184964,2.80543279561274,3.35153646758564,2.06654207171443,4.08196692387575,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390318077491,0.906970670894253,0.754420319023592,0,0.922305443831782,0,0.727067458955011,1.06949213515416,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0,0.164549020602121,0,0,0,0.220528398054962,0,0.484393280087717,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0,0.561849044819294,0.0640251524048693,0,0.476293691283074,0.115884325944855,0.77163688185482,0,0,0,0.177475806159338,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p@chr10:50689167..50689171,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=514 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:50689167..50689171,+ | |||
|id=chr10:50689167..50689171,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.02e-16!14;UBERON:0003918!1.02e-16!14;UBERON:0005095!1.02e-16!14;UBERON:0007687!1.02e-16!14;UBERON:0006554!3.93e-16!16;UBERON:0001008!6.69e-15!17;UBERON:0000489!4.04e-11!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.23e-58,14;UBERON:0003918,6.23e-58,14;UBERON:0011143,6.23e-58,14;UBERON:0005095,6.23e-58,14;UBERON:0007687,6.23e-58,14;UBERON:0006554,6.90e-45,18;UBERON:0001008,1.75e-42,19;UBERON:0000489,2.33e-38,21;UBERON:0003103,2.94e-18,43;UBERON:0005172,6.76e-16,49;UBERON:0005173,6.76e-16,49;UBERON:0002417,6.76e-16,49;UBERON:0000916,6.76e-16,49;UBERON:0005177,2.05e-13,79;UBERON:0003104,1.48e-12,61;UBERON:0009142,1.48e-12,61;UBERON:0002100,1.25e-11,90;UBERON:0009569,1.60e-11,66;UBERON:0000998,6.57e-08,1;UBERON:0007194,6.57e-08,1;UBERON:0006868,6.57e-08,1;UBERON:0000080,7.72e-08,4;UBERON:0005904,7.72e-08,4;UBERON:0006947,7.72e-08,4;UBERON:0002120,7.72e-08,4;UBERON:0004054,7.72e-08,4;UBERON:0004875,7.72e-08,4;UBERON:0004876,7.72e-08,4;UBERON:0005721,7.72e-08,4;UBERON:0005754,7.72e-08,4;UBERON:0007297,7.72e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.509196819251581,0.995255764880744,4.80173241023982,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,2.62771579002376,1.1270773567308,3.46207257337034,3.29719228184964,2.80543279561274,3.35153646758564,2.06654207171443,4.08196692387575,2.22114895059241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390318077491,0.906970670894253,0.754420319023592,0,0.922305443831782,0,0.727067458955011,1.06949213515416,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.354680467284547,0,0.164549020602121,0,0,0,0.220528398054962,0,0.484393280087717,0.120625849856312,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50471631210609,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.666740183404846,0.206035057238894,0,0,0.25347929989024,0,0.561849044819294,0.0640251524048693,0,0.476293691283074,0.115884325944855,0.77163688185482,0,0,0,0.177475806159338,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.182927972872773,0,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p@chr10:50689167..50689171,+ | |||
}} |
Revision as of 16:51, 12 September 2013
Short description: | p@chr10:50689167..50689171, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:50689167..50689171, + |
Coexpression cluster: | MCL_coexpression_mm9:514 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 6.23e-58 | 14 |
kidney mesenchyme | 6.23e-58 | 14 |
upper urinary tract | 6.23e-58 | 14 |
kidney rudiment | 6.23e-58 | 14 |
kidney field | 6.23e-58 | 14 |
urinary system structure | 6.90e-45 | 18 |
renal system | 1.75e-42 | 19 |
cavitated compound organ | 2.33e-38 | 21 |
compound organ | 2.94e-18 | 43 |
abdomen element | 6.76e-16 | 49 |
abdominal segment element | 6.76e-16 | 49 |
abdominal segment of trunk | 6.76e-16 | 49 |
abdomen | 6.76e-16 | 49 |
trunk region element | 2.05e-13 | 79 |
mesenchyme | 1.48e-12 | 61 |
entire embryonic mesenchyme | 1.48e-12 | 61 |
trunk | 1.25e-11 | 90 |
subdivision of trunk | 1.60e-11 | 66 |
seminal vesicle | 6.57e-08 | 1 |
vesicular gland | 6.57e-08 | 1 |
seminal fluid secreting gland | 6.57e-08 | 1 |
mesonephros | 7.72e-08 | 4 |
duct of male reproductive system | 7.72e-08 | 4 |
male genital duct | 7.72e-08 | 4 |
pronephros | 7.72e-08 | 4 |
internal male genitalia | 7.72e-08 | 4 |
nephrogenic cord | 7.72e-08 | 4 |
urogenital ridge | 7.72e-08 | 4 |
pronephric mesoderm | 7.72e-08 | 4 |
rostral part of nephrogenic cord | 7.72e-08 | 4 |
presumptive pronephric mesoderm | 7.72e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.