FFCP PHASE1:Mm9::chr11:110052090..110052091,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=96|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:110052090..110052091,-|id=chr11:110052090..110052091,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.71e-12!47;UBERON:0002107!1.76e-09!22;UBERON:0007499!1.76e-09!22;UBERON:0006925!1.76e-09!22;UBERON:0009497!1.76e-09!22;UBERON:0000015!1.76e-09!22;UBERON:0002423!1.76e-09!22;UBERON:0006235!1.76e-09!22;UBERON:0008835!1.76e-09!22;UBERON:0003894!1.76e-09!22;UBERON:0004161!1.76e-09!22;UBERON:0008836!1.76e-09!22;UBERON:0009854!8.40e-09!23;UBERON:0009856!8.40e-09!23;UBERON:0002365!1.20e-08!25;UBERON:0002330!1.20e-08!25;UBERON:0009569!5.09e-08!66;UBERON:0005177!1.58e-07!85;UBERON:0000466!3.39e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.00e-32,22;UBERON:0007499,8.00e-32,22;UBERON:0006925,8.00e-32,22;UBERON:0009497,8.00e-32,22;UBERON:0000015,8.00e-32,22;UBERON:0002423,8.00e-32,22;UBERON:0006235,8.00e-32,22;UBERON:0008835,8.00e-32,22;UBERON:0003894,8.00e-32,22;UBERON:0004161,8.00e-32,22;UBERON:0008836,8.00e-32,22;UBERON:0009854,2.17e-30,23;UBERON:0009856,2.17e-30,23;UBERON:0002365,7.30e-28,25;UBERON:0002330,7.30e-28,25;UBERON:0003914,5.80e-20,47;UBERON:0005256,6.45e-15,45;UBERON:0005172,1.37e-13,49;UBERON:0005173,1.37e-13,49;UBERON:0002417,1.37e-13,49;UBERON:0000916,1.37e-13,49;UBERON:0003929,5.86e-12,55;UBERON:0002368,7.58e-11,60;UBERON:0003104,1.20e-10,61;UBERON:0009142,1.20e-10,61;UBERON:0000949,1.54e-10,72;UBERON:0002530,6.64e-10,65;UBERON:0000490,9.86e-10,66;UBERON:0009569,9.86e-10,66;UBERON:0005177,1.81e-09,79;UBERON:0005911,3.01e-09,69;UBERON:0000025,1.30e-08,114;UBERON:0002100,4.06e-08,90;UBERON:0004111,6.23e-08,122;UBERON:0001041,8.91e-08,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,1.61910957491345,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.373220911830279,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0,0.32833492815819,0.810688095458557,0.292399974850665,1.09775057645525,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,2.66807364378434,0,0,0,0,0.482354319504834,0.25462585178142,0.863088412352432,1.94562272130042,1.37280706594041,12.9391385874619,4.46569137202204,6.24075346229121,3.53610429125956,2.51156378930677,7.71909634181387,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.975668239288994,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0.275936746304732,0,0.234423373184406,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.968786560175433,0,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0.39061315453185,0.314578033277133,0.483168241652012,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,1.12950368523413,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.565879024158229,0.37456602987953,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.789209134313529,0,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr11:110052090..110052091,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=96 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:110052090..110052091,- | |||
|id=chr11:110052090..110052091,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.71e-12!47;UBERON:0002107!1.76e-09!22;UBERON:0007499!1.76e-09!22;UBERON:0006925!1.76e-09!22;UBERON:0009497!1.76e-09!22;UBERON:0000015!1.76e-09!22;UBERON:0002423!1.76e-09!22;UBERON:0006235!1.76e-09!22;UBERON:0008835!1.76e-09!22;UBERON:0003894!1.76e-09!22;UBERON:0004161!1.76e-09!22;UBERON:0008836!1.76e-09!22;UBERON:0009854!8.40e-09!23;UBERON:0009856!8.40e-09!23;UBERON:0002365!1.20e-08!25;UBERON:0002330!1.20e-08!25;UBERON:0009569!5.09e-08!66;UBERON:0005177!1.58e-07!85;UBERON:0000466!3.39e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.00e-32,22;UBERON:0007499,8.00e-32,22;UBERON:0006925,8.00e-32,22;UBERON:0009497,8.00e-32,22;UBERON:0000015,8.00e-32,22;UBERON:0002423,8.00e-32,22;UBERON:0006235,8.00e-32,22;UBERON:0008835,8.00e-32,22;UBERON:0003894,8.00e-32,22;UBERON:0004161,8.00e-32,22;UBERON:0008836,8.00e-32,22;UBERON:0009854,2.17e-30,23;UBERON:0009856,2.17e-30,23;UBERON:0002365,7.30e-28,25;UBERON:0002330,7.30e-28,25;UBERON:0003914,5.80e-20,47;UBERON:0005256,6.45e-15,45;UBERON:0005172,1.37e-13,49;UBERON:0005173,1.37e-13,49;UBERON:0002417,1.37e-13,49;UBERON:0000916,1.37e-13,49;UBERON:0003929,5.86e-12,55;UBERON:0002368,7.58e-11,60;UBERON:0003104,1.20e-10,61;UBERON:0009142,1.20e-10,61;UBERON:0000949,1.54e-10,72;UBERON:0002530,6.64e-10,65;UBERON:0000490,9.86e-10,66;UBERON:0009569,9.86e-10,66;UBERON:0005177,1.81e-09,79;UBERON:0005911,3.01e-09,69;UBERON:0000025,1.30e-08,114;UBERON:0002100,4.06e-08,90;UBERON:0004111,6.23e-08,122;UBERON:0001041,8.91e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,1.61910957491345,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0.289198713839823,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.373220911830279,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0,0.32833492815819,0.810688095458557,0.292399974850665,1.09775057645525,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,2.66807364378434,0,0,0,0,0.482354319504834,0.25462585178142,0.863088412352432,1.94562272130042,1.37280706594041,12.9391385874619,4.46569137202204,6.24075346229121,3.53610429125956,2.51156378930677,7.71909634181387,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0.975668239288994,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0,0.275936746304732,0,0.234423373184406,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0.395287777946524,0,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.968786560175433,0,0.238744688006273,0,0.291480836629851,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0.39061315453185,0.314578033277133,0.483168241652012,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,1.12950368523413,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.565879024158229,0.37456602987953,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.789209134313529,0,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr11:110052090..110052091,- | |||
}} |
Revision as of 18:40, 12 September 2013
Short description: | p@chr11:110052090..110052091, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:110052090..110052091, - |
Coexpression cluster: | MCL_coexpression_mm9:96 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 8.00e-32 | 22 |
epithelial sac | 8.00e-32 | 22 |
digestive gland | 8.00e-32 | 22 |
epithelium of foregut-midgut junction | 8.00e-32 | 22 |
anatomical boundary | 8.00e-32 | 22 |
hepatobiliary system | 8.00e-32 | 22 |
foregut-midgut junction | 8.00e-32 | 22 |
hepatic diverticulum | 8.00e-32 | 22 |
liver primordium | 8.00e-32 | 22 |
septum transversum | 8.00e-32 | 22 |
liver bud | 8.00e-32 | 22 |
digestive tract diverticulum | 2.17e-30 | 23 |
sac | 2.17e-30 | 23 |
exocrine gland | 7.30e-28 | 25 |
exocrine system | 7.30e-28 | 25 |
epithelial tube | 5.80e-20 | 47 |
trunk mesenchyme | 6.45e-15 | 45 |
abdomen element | 1.37e-13 | 49 |
abdominal segment element | 1.37e-13 | 49 |
abdominal segment of trunk | 1.37e-13 | 49 |
abdomen | 1.37e-13 | 49 |
gut epithelium | 5.86e-12 | 55 |
endocrine gland | 7.58e-11 | 60 |
mesenchyme | 1.20e-10 | 61 |
entire embryonic mesenchyme | 1.20e-10 | 61 |
endocrine system | 1.54e-10 | 72 |
gland | 6.64e-10 | 65 |
unilaminar epithelium | 9.86e-10 | 66 |
subdivision of trunk | 9.86e-10 | 66 |
trunk region element | 1.81e-09 | 79 |
endo-epithelium | 3.01e-09 | 69 |
tube | 1.30e-08 | 114 |
trunk | 4.06e-08 | 90 |
anatomical conduit | 6.23e-08 | 122 |
foregut | 8.91e-08 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.