FFCP PHASE1:Mm9::chr10:19399797..19399799,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=478|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:19399797..19399799,+|id=chr10:19399797..19399799,+|ontology_enrichment_celltype=CL:0000473!8.30e-13!3;CL:0000627!8.30e-13!3;CL:0000682!8.30e-13!3;CL:0000239!7.48e-07!6;CL:0000677!7.48e-07!6;CL:0000212!7.48e-07!6;CL:0000584!7.48e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,1.59e-17,3;CL:0000239,2.87e-09,6;CL:0000677,2.87e-09,6;CL:0000584,2.87e-09,6;CL:0000066,1.96e-08,25;CL:0000075,4.45e-08,7;CL:0000473,4.45e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.76e-28!15;UBERON:0000331!6.99e-27!3;UBERON:0002116!6.99e-27!3;UBERON:0001204!6.99e-27!3;UBERON:0001168!6.99e-27!3;UBERON:0001962!1.30e-18!2;UBERON:0001961!1.30e-18!2;UBERON:0001744!1.30e-18!2;UBERON:0004923!9.40e-18!24;UBERON:0001242!4.61e-17!13;UBERON:0000060!4.61e-17!13;UBERON:0001262!4.61e-17!13;UBERON:0004786!4.61e-17!13;UBERON:0002465!9.50e-13!3;UBERON:0003199!2.01e-10!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.90e-21,15;UBERON:0000331,1.31e-17,3;UBERON:0002116,1.31e-17,3;UBERON:0001204,1.31e-17,3;UBERON:0001168,1.31e-17,3;UBERON:0001242,8.25e-16,13;UBERON:0001262,8.25e-16,13;UBERON:0004786,8.25e-16,13;UBERON:0003199,4.85e-14,1;UBERON:0002108,1.80e-13,4;UBERON:0004923,2.31e-13,24;UBERON:0001962,1.14e-07,2;UBERON:0001961,1.14e-07,2;UBERON:0001744,1.14e-07,2;UBERON:0000160,6.81e-07,31|phase1_expression=0,0,0,0,1.50268718983904,0,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.95995453676044,4.35877634027623,1.72269589234506,0,1.72376986148711,4.94060890586572,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:19399797..19399799,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=478 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:19399797..19399799,+ | |||
|id=chr10:19399797..19399799,+ | |||
|ontology_enrichment_celltype=CL:0000473!8.30e-13!3;CL:0000627!8.30e-13!3;CL:0000682!8.30e-13!3;CL:0000239!7.48e-07!6;CL:0000677!7.48e-07!6;CL:0000212!7.48e-07!6;CL:0000584!7.48e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.59e-17,3;CL:0000239,2.87e-09,6;CL:0000677,2.87e-09,6;CL:0000584,2.87e-09,6;CL:0000066,1.96e-08,25;CL:0000075,4.45e-08,7;CL:0000473,4.45e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.76e-28!15;UBERON:0000331!6.99e-27!3;UBERON:0002116!6.99e-27!3;UBERON:0001204!6.99e-27!3;UBERON:0001168!6.99e-27!3;UBERON:0001962!1.30e-18!2;UBERON:0001961!1.30e-18!2;UBERON:0001744!1.30e-18!2;UBERON:0004923!9.40e-18!24;UBERON:0001242!4.61e-17!13;UBERON:0000060!4.61e-17!13;UBERON:0001262!4.61e-17!13;UBERON:0004786!4.61e-17!13;UBERON:0002465!9.50e-13!3;UBERON:0003199!2.01e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.90e-21,15;UBERON:0000331,1.31e-17,3;UBERON:0002116,1.31e-17,3;UBERON:0001204,1.31e-17,3;UBERON:0001168,1.31e-17,3;UBERON:0001242,8.25e-16,13;UBERON:0001262,8.25e-16,13;UBERON:0004786,8.25e-16,13;UBERON:0003199,4.85e-14,1;UBERON:0002108,1.80e-13,4;UBERON:0004923,2.31e-13,24;UBERON:0001962,1.14e-07,2;UBERON:0001961,1.14e-07,2;UBERON:0001744,1.14e-07,2;UBERON:0000160,6.81e-07,31 | |||
|phase1_expression=0,0,0,0,1.50268718983904,0,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.95995453676044,4.35877634027623,1.72269589234506,0,1.72376986148711,4.94060890586572,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:19399797..19399799,+ | |||
}} |
Revision as of 16:21, 12 September 2013
Short description: | p@chr10:19399797..19399799, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:19399797..19399799, + |
Coexpression cluster: | MCL_coexpression_mm9:478 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.59e-17 | 3 |
brush border epithelial cell | 2.87e-09 | 6 |
gut absorptive cell | 2.87e-09 | 6 |
enterocyte | 2.87e-09 | 6 |
epithelial cell | 1.96e-08 | 25 |
columnar/cuboidal epithelial cell | 4.45e-08 | 7 |
defensive cell | 4.45e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.90e-21 | 15 |
ileal mucosa | 1.31e-17 | 3 |
ileum | 1.31e-17 | 3 |
mucosa of small intestine | 1.31e-17 | 3 |
wall of small intestine | 1.31e-17 | 3 |
intestinal mucosa | 8.25e-16 | 13 |
wall of intestine | 8.25e-16 | 13 |
gastrointestinal system mucosa | 8.25e-16 | 13 |
egg chamber | 4.85e-14 | 1 |
small intestine | 1.80e-13 | 4 |
organ component layer | 2.31e-13 | 24 |
gut-associated lymphoid tissue | 1.14e-07 | 2 |
mucosa-associated lymphoid tissue | 1.14e-07 | 2 |
lymphoid tissue | 1.14e-07 | 2 |
intestine | 6.81e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.