FFCP PHASE1:Mm9::chr15:91991752..91991770,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12805|HGNC=|MCL_coexpression_id=1|UniProt=P12960|association_with_transcript=-17bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end|description=CAGE_peak_10_at_Cntn1_5end|id=chr15:91991752..91991770,+|ontology_enrichment_celltype=CL:0000117!6.57e-11!23;CL:0000337!6.57e-11!23;CL:0000540!5.41e-07!33;CL:0000047!5.41e-07!33;CL:0000031!5.41e-07!33;CL:0000404!5.41e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-12,23;CL:0000337,3.49e-12,23;CL:0002610,1.56e-09,3;CL:0002614,1.19e-08,3;CL:0002612,2.88e-08,3;CL:0000540,8.26e-08,33;CL:0000047,8.26e-08,33;CL:0000031,8.26e-08,33;CL:0000404,8.26e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.14e-24!75;UBERON:0001016!5.14e-24!75;UBERON:0001017!5.82e-24!73;UBERON:0005743!5.82e-24!73;UBERON:0001049!8.30e-23!52;UBERON:0005068!8.30e-23!52;UBERON:0006241!8.30e-23!52;UBERON:0007135!8.30e-23!52;UBERON:0000033!6.93e-22!63;UBERON:0000955!7.87e-21!50;UBERON:0006238!7.87e-21!50;UBERON:0002616!6.90e-20!49;UBERON:0002346!1.29e-19!71;UBERON:0003075!1.29e-19!71;UBERON:0007284!1.29e-19!71;UBERON:0002020!1.38e-19!34;UBERON:0004121!3.60e-19!102;UBERON:0000924!3.60e-19!102;UBERON:0006601!3.60e-19!102;UBERON:0003056!1.15e-15!49;UBERON:0002791!2.54e-14!29;UBERON:0003528!2.54e-14!29;UBERON:0001893!2.54e-14!29;UBERON:0003080!1.32e-13!40;UBERON:0007811!9.95e-13!86;UBERON:0002780!1.28e-12!39;UBERON:0001890!1.28e-12!39;UBERON:0006240!1.28e-12!39;UBERON:0002021!6.39e-12!10;UBERON:0000411!6.39e-12!10;UBERON:0001950!6.39e-12!10;UBERON:0003076!9.72e-11!12;UBERON:0003057!9.72e-11!12;UBERON:0000153!1.18e-10!94;UBERON:0002619!2.31e-10!17;UBERON:0000956!3.99e-09!21;UBERON:0001869!3.99e-09!21;UBERON:0000203!3.99e-09!21;UBERON:0002298!6.81e-09!6;UBERON:0002240!1.86e-08!6;UBERON:0005174!1.86e-08!6;UBERON:0001137!1.86e-08!6;UBERON:0001948!3.73e-07!5;UBERON:0002315!3.73e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.03e-44,54;UBERON:0001049,2.30e-39,52;UBERON:0005068,2.30e-39,52;UBERON:0006241,2.30e-39,52;UBERON:0007135,2.30e-39,52;UBERON:0001017,1.07e-35,73;UBERON:0001016,1.42e-34,75;UBERON:0002020,5.00e-31,34;UBERON:0002346,7.74e-31,64;UBERON:0003075,7.74e-31,64;UBERON:0007284,7.74e-31,64;UBERON:0000955,4.99e-29,47;UBERON:0006238,4.99e-29,47;UBERON:0002616,2.66e-27,46;UBERON:0010371,2.81e-26,73;UBERON:0004121,5.96e-26,95;UBERON:0000924,5.96e-26,95;UBERON:0006601,5.96e-26,95;UBERON:0002021,1.15e-22,10;UBERON:0000411,1.15e-22,10;UBERON:0001950,1.15e-22,10;UBERON:0003076,2.95e-21,12;UBERON:0003057,2.95e-21,12;UBERON:0003528,4.80e-21,29;UBERON:0002791,4.80e-21,29;UBERON:0001893,4.80e-21,29;UBERON:0003080,6.98e-21,40;UBERON:0010314,1.43e-19,92;UBERON:0002780,4.78e-19,39;UBERON:0001890,4.78e-19,39;UBERON:0006240,4.78e-19,39;UBERON:0003056,3.17e-16,49;UBERON:0002240,1.32e-15,6;UBERON:0005174,1.32e-15,6;UBERON:0001137,1.32e-15,6;UBERON:0002619,1.87e-15,17;UBERON:0000025,1.38e-14,114;UBERON:0000956,1.65e-14,21;UBERON:0001869,1.65e-14,21;UBERON:0000203,1.65e-14,21;UBERON:0004111,3.21e-13,122;UBERON:0001948,5.82e-13,5;UBERON:0002315,5.82e-13,5;UBERON:0002950,3.41e-11,4;UBERON:0001891,3.41e-11,4;UBERON:0009616,3.41e-11,4;UBERON:0010286,3.41e-11,4;UBERON:0004684,1.56e-09,3;UBERON:0002275,1.56e-09,3;UBERON:0011216,2.49e-09,194;UBERON:0002038,1.19e-08,3;UBERON:0009663,1.19e-08,3;UBERON:0009661,1.19e-08,3;UBERON:0000125,1.19e-08,3;UBERON:0002308,1.19e-08,3;UBERON:0002257,2.88e-08,3;UBERON:0004733,6.92e-08,6;UBERON:0004732,6.92e-08,6;UBERON:0002028,6.92e-08,6;UBERON:0007277,6.92e-08,6;UBERON:0002420,9.74e-08,8;UBERON:0007245,9.74e-08,8;UBERON:0010009,9.74e-08,8;UBERON:0010011,9.74e-08,8;UBERON:0000454,9.74e-08,8;UBERON:0000483,2.24e-07,174;UBERON:0000119,3.21e-07,176;UBERON:0001896,6.30e-07,2;UBERON:0002298,6.30e-07,2;UBERON:0005290,6.30e-07,2;UBERON:0010096,6.30e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,3.99911378165325,3.75476519617743,0.367472397644862,0,0,7.70811166995721,4.46905683298157,8.1411462625809,0.131886287730194,0.182975287204819,0,3.62937898701795,2.8138130501584,5.19514042441154,5.00868595305235,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,4.60782754989601,0,0,0,0,4.94309110035915,1.37250180845588,1.63350657746724,2.60736480288415,3.58001640262463,3.94797284663164,4.38051410282946,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.38097570952153,2.86447756719698,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,1.35942722695261,2.07104124700728,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0,0,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0.57386499620653,0,0.231867835620421|short_description=p10@Cntn1}} | ||
|EntrezGene=12805 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P12960 | |||
|association_with_transcript=-17bp_to_ENSMUST00000068378,NM_001159647,uc007xil.2_5end | |||
|description=CAGE_peak_10_at_Cntn1_5end | |||
|id=chr15:91991752..91991770,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.57e-11!23;CL:0000337!6.57e-11!23;CL:0000540!5.41e-07!33;CL:0000047!5.41e-07!33;CL:0000031!5.41e-07!33;CL:0000404!5.41e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-12,23;CL:0000337,3.49e-12,23;CL:0002610,1.56e-09,3;CL:0002614,1.19e-08,3;CL:0002612,2.88e-08,3;CL:0000540,8.26e-08,33;CL:0000047,8.26e-08,33;CL:0000031,8.26e-08,33;CL:0000404,8.26e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.14e-24!75;UBERON:0001016!5.14e-24!75;UBERON:0001017!5.82e-24!73;UBERON:0005743!5.82e-24!73;UBERON:0001049!8.30e-23!52;UBERON:0005068!8.30e-23!52;UBERON:0006241!8.30e-23!52;UBERON:0007135!8.30e-23!52;UBERON:0000033!6.93e-22!63;UBERON:0000955!7.87e-21!50;UBERON:0006238!7.87e-21!50;UBERON:0002616!6.90e-20!49;UBERON:0002346!1.29e-19!71;UBERON:0003075!1.29e-19!71;UBERON:0007284!1.29e-19!71;UBERON:0002020!1.38e-19!34;UBERON:0004121!3.60e-19!102;UBERON:0000924!3.60e-19!102;UBERON:0006601!3.60e-19!102;UBERON:0003056!1.15e-15!49;UBERON:0002791!2.54e-14!29;UBERON:0003528!2.54e-14!29;UBERON:0001893!2.54e-14!29;UBERON:0003080!1.32e-13!40;UBERON:0007811!9.95e-13!86;UBERON:0002780!1.28e-12!39;UBERON:0001890!1.28e-12!39;UBERON:0006240!1.28e-12!39;UBERON:0002021!6.39e-12!10;UBERON:0000411!6.39e-12!10;UBERON:0001950!6.39e-12!10;UBERON:0003076!9.72e-11!12;UBERON:0003057!9.72e-11!12;UBERON:0000153!1.18e-10!94;UBERON:0002619!2.31e-10!17;UBERON:0000956!3.99e-09!21;UBERON:0001869!3.99e-09!21;UBERON:0000203!3.99e-09!21;UBERON:0002298!6.81e-09!6;UBERON:0002240!1.86e-08!6;UBERON:0005174!1.86e-08!6;UBERON:0001137!1.86e-08!6;UBERON:0001948!3.73e-07!5;UBERON:0002315!3.73e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.03e-44,54;UBERON:0001049,2.30e-39,52;UBERON:0005068,2.30e-39,52;UBERON:0006241,2.30e-39,52;UBERON:0007135,2.30e-39,52;UBERON:0001017,1.07e-35,73;UBERON:0001016,1.42e-34,75;UBERON:0002020,5.00e-31,34;UBERON:0002346,7.74e-31,64;UBERON:0003075,7.74e-31,64;UBERON:0007284,7.74e-31,64;UBERON:0000955,4.99e-29,47;UBERON:0006238,4.99e-29,47;UBERON:0002616,2.66e-27,46;UBERON:0010371,2.81e-26,73;UBERON:0004121,5.96e-26,95;UBERON:0000924,5.96e-26,95;UBERON:0006601,5.96e-26,95;UBERON:0002021,1.15e-22,10;UBERON:0000411,1.15e-22,10;UBERON:0001950,1.15e-22,10;UBERON:0003076,2.95e-21,12;UBERON:0003057,2.95e-21,12;UBERON:0003528,4.80e-21,29;UBERON:0002791,4.80e-21,29;UBERON:0001893,4.80e-21,29;UBERON:0003080,6.98e-21,40;UBERON:0010314,1.43e-19,92;UBERON:0002780,4.78e-19,39;UBERON:0001890,4.78e-19,39;UBERON:0006240,4.78e-19,39;UBERON:0003056,3.17e-16,49;UBERON:0002240,1.32e-15,6;UBERON:0005174,1.32e-15,6;UBERON:0001137,1.32e-15,6;UBERON:0002619,1.87e-15,17;UBERON:0000025,1.38e-14,114;UBERON:0000956,1.65e-14,21;UBERON:0001869,1.65e-14,21;UBERON:0000203,1.65e-14,21;UBERON:0004111,3.21e-13,122;UBERON:0001948,5.82e-13,5;UBERON:0002315,5.82e-13,5;UBERON:0002950,3.41e-11,4;UBERON:0001891,3.41e-11,4;UBERON:0009616,3.41e-11,4;UBERON:0010286,3.41e-11,4;UBERON:0004684,1.56e-09,3;UBERON:0002275,1.56e-09,3;UBERON:0011216,2.49e-09,194;UBERON:0002038,1.19e-08,3;UBERON:0009663,1.19e-08,3;UBERON:0009661,1.19e-08,3;UBERON:0000125,1.19e-08,3;UBERON:0002308,1.19e-08,3;UBERON:0002257,2.88e-08,3;UBERON:0004733,6.92e-08,6;UBERON:0004732,6.92e-08,6;UBERON:0002028,6.92e-08,6;UBERON:0007277,6.92e-08,6;UBERON:0002420,9.74e-08,8;UBERON:0007245,9.74e-08,8;UBERON:0010009,9.74e-08,8;UBERON:0010011,9.74e-08,8;UBERON:0000454,9.74e-08,8;UBERON:0000483,2.24e-07,174;UBERON:0000119,3.21e-07,176;UBERON:0001896,6.30e-07,2;UBERON:0002298,6.30e-07,2;UBERON:0005290,6.30e-07,2;UBERON:0010096,6.30e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,3.99911378165325,3.75476519617743,0.367472397644862,0,0,7.70811166995721,4.46905683298157,8.1411462625809,0.131886287730194,0.182975287204819,0,3.62937898701795,2.8138130501584,5.19514042441154,5.00868595305235,3.27454865837937,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09893115816166,4.60782754989601,0,0,0,0,4.94309110035915,1.37250180845588,1.63350657746724,2.60736480288415,3.58001640262463,3.94797284663164,4.38051410282946,0,0,0,0.210441855886474,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9403718295483,6.56385444916338,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,1.38097570952153,2.86447756719698,2.92150409984269,2.05524755931193,1.5107877947794,2.70009000092722,2.2516060161211,1.35942722695261,2.07104124700728,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0,0,0.280924522409647,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0.57386499620653,0,0.231867835620421 | |||
|short_description=p10@Cntn1 | |||
}} |
Revision as of 11:37, 13 September 2013
Short description: | p10@Cntn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Cntn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -17bp_to_ENSMUST00000068378, NM_001159647, uc007xil.2_5end |
EntrezGene: | Cntn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.49e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-12 | 23 |
raphe nuclei neuron | 1.56e-09 | 3 |
neuron of the substantia nigra | 1.19e-08 | 3 |
neuron of the ventral spinal cord | 2.88e-08 | 3 |
neuron | 8.26e-08 | 33 |
neuronal stem cell | 8.26e-08 | 33 |
neuroblast | 8.26e-08 | 33 |
electrically signaling cell | 8.26e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.