FFCP PHASE1:Mm9::chr2:31315907..31315917,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:31315907..31315917,-|id=chr2:31315907..31315917,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.48e-15,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.89e-22!22;UBERON:0007499!2.89e-22!22;UBERON:0006925!2.89e-22!22;UBERON:0009497!2.89e-22!22;UBERON:0000015!2.89e-22!22;UBERON:0002423!2.89e-22!22;UBERON:0006235!2.89e-22!22;UBERON:0008835!2.89e-22!22;UBERON:0003894!2.89e-22!22;UBERON:0004161!2.89e-22!22;UBERON:0008836!2.89e-22!22;UBERON:0009854!3.95e-21!23;UBERON:0009856!3.95e-21!23;UBERON:0002365!3.93e-19!25;UBERON:0002330!3.93e-19!25;UBERON:0005172!9.11e-15!49;UBERON:0005173!9.11e-15!49;UBERON:0002417!9.11e-15!49;UBERON:0000916!9.11e-15!49;UBERON:0002368!6.17e-14!60;UBERON:0002530!1.90e-12!65;UBERON:0005256!2.01e-12!47;UBERON:0000949!5.84e-12!72;UBERON:0005057!4.58e-11!51;UBERON:0003929!6.08e-10!55;UBERON:0009569!1.06e-09!66;UBERON:0003914!1.93e-08!47;UBERON:0000490!1.42e-07!66;UBERON:0005177!2.30e-07!85;UBERON:0005911!4.59e-07!69;UBERON:0002405!6.63e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-35,22;UBERON:0007499,1.36e-35,22;UBERON:0006925,1.36e-35,22;UBERON:0009497,1.36e-35,22;UBERON:0000015,1.36e-35,22;UBERON:0002423,1.36e-35,22;UBERON:0006235,1.36e-35,22;UBERON:0008835,1.36e-35,22;UBERON:0003894,1.36e-35,22;UBERON:0004161,1.36e-35,22;UBERON:0008836,1.36e-35,22;UBERON:0009854,5.02e-34,23;UBERON:0009856,5.02e-34,23;UBERON:0002365,2.88e-31,25;UBERON:0002330,2.88e-31,25;UBERON:0005256,3.98e-17,45;UBERON:0003914,2.27e-16,47;UBERON:0005172,1.12e-15,49;UBERON:0005173,1.12e-15,49;UBERON:0002417,1.12e-15,49;UBERON:0000916,1.12e-15,49;UBERON:0002368,1.84e-15,60;UBERON:0002530,3.22e-14,65;UBERON:0003929,6.78e-14,55;UBERON:0000949,9.10e-13,72;UBERON:0003104,1.84e-12,61;UBERON:0009142,1.84e-12,61;UBERON:0000490,1.84e-11,66;UBERON:0009569,1.84e-11,66;UBERON:0005911,6.23e-11,69;UBERON:0005177,1.88e-09,79;UBERON:0001041,2.53e-09,80;UBERON:0002100,3.38e-08,90;UBERON:0000025,9.12e-08,114;UBERON:0004111,3.37e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,8.4470934268197,6.2723764193627,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0.202860121388503,0.72353147925725,1.01850340712568,0.863088412352432,4.05338066937588,0.274561413188081,1.43768206527355,0.744281895337007,0,4.54641980304801,1.25578189465339,9.16642690590398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr2:31315907..31315917,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:31315907..31315917,- | |||
|id=chr2:31315907..31315917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.48e-15,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.89e-22!22;UBERON:0007499!2.89e-22!22;UBERON:0006925!2.89e-22!22;UBERON:0009497!2.89e-22!22;UBERON:0000015!2.89e-22!22;UBERON:0002423!2.89e-22!22;UBERON:0006235!2.89e-22!22;UBERON:0008835!2.89e-22!22;UBERON:0003894!2.89e-22!22;UBERON:0004161!2.89e-22!22;UBERON:0008836!2.89e-22!22;UBERON:0009854!3.95e-21!23;UBERON:0009856!3.95e-21!23;UBERON:0002365!3.93e-19!25;UBERON:0002330!3.93e-19!25;UBERON:0005172!9.11e-15!49;UBERON:0005173!9.11e-15!49;UBERON:0002417!9.11e-15!49;UBERON:0000916!9.11e-15!49;UBERON:0002368!6.17e-14!60;UBERON:0002530!1.90e-12!65;UBERON:0005256!2.01e-12!47;UBERON:0000949!5.84e-12!72;UBERON:0005057!4.58e-11!51;UBERON:0003929!6.08e-10!55;UBERON:0009569!1.06e-09!66;UBERON:0003914!1.93e-08!47;UBERON:0000490!1.42e-07!66;UBERON:0005177!2.30e-07!85;UBERON:0005911!4.59e-07!69;UBERON:0002405!6.63e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.36e-35,22;UBERON:0007499,1.36e-35,22;UBERON:0006925,1.36e-35,22;UBERON:0009497,1.36e-35,22;UBERON:0000015,1.36e-35,22;UBERON:0002423,1.36e-35,22;UBERON:0006235,1.36e-35,22;UBERON:0008835,1.36e-35,22;UBERON:0003894,1.36e-35,22;UBERON:0004161,1.36e-35,22;UBERON:0008836,1.36e-35,22;UBERON:0009854,5.02e-34,23;UBERON:0009856,5.02e-34,23;UBERON:0002365,2.88e-31,25;UBERON:0002330,2.88e-31,25;UBERON:0005256,3.98e-17,45;UBERON:0003914,2.27e-16,47;UBERON:0005172,1.12e-15,49;UBERON:0005173,1.12e-15,49;UBERON:0002417,1.12e-15,49;UBERON:0000916,1.12e-15,49;UBERON:0002368,1.84e-15,60;UBERON:0002530,3.22e-14,65;UBERON:0003929,6.78e-14,55;UBERON:0000949,9.10e-13,72;UBERON:0003104,1.84e-12,61;UBERON:0009142,1.84e-12,61;UBERON:0000490,1.84e-11,66;UBERON:0009569,1.84e-11,66;UBERON:0005911,6.23e-11,69;UBERON:0005177,1.88e-09,79;UBERON:0001041,2.53e-09,80;UBERON:0002100,3.38e-08,90;UBERON:0000025,9.12e-08,114;UBERON:0004111,3.37e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61910957491345,8.4470934268197,6.2723764193627,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0.202860121388503,0.72353147925725,1.01850340712568,0.863088412352432,4.05338066937588,0.274561413188081,1.43768206527355,0.744281895337007,0,4.54641980304801,1.25578189465339,9.16642690590398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,1.8267896946876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:31315907..31315917,- | |||
}} |
Revision as of 23:44, 13 September 2013
Short description: | p@chr2:31315907..31315917, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:31315907..31315917, - |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.48e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.36e-35 | 22 |
epithelial sac | 1.36e-35 | 22 |
digestive gland | 1.36e-35 | 22 |
epithelium of foregut-midgut junction | 1.36e-35 | 22 |
anatomical boundary | 1.36e-35 | 22 |
hepatobiliary system | 1.36e-35 | 22 |
foregut-midgut junction | 1.36e-35 | 22 |
hepatic diverticulum | 1.36e-35 | 22 |
liver primordium | 1.36e-35 | 22 |
septum transversum | 1.36e-35 | 22 |
liver bud | 1.36e-35 | 22 |
digestive tract diverticulum | 5.02e-34 | 23 |
sac | 5.02e-34 | 23 |
exocrine gland | 2.88e-31 | 25 |
exocrine system | 2.88e-31 | 25 |
trunk mesenchyme | 3.98e-17 | 45 |
epithelial tube | 2.27e-16 | 47 |
abdomen element | 1.12e-15 | 49 |
abdominal segment element | 1.12e-15 | 49 |
abdominal segment of trunk | 1.12e-15 | 49 |
abdomen | 1.12e-15 | 49 |
endocrine gland | 1.84e-15 | 60 |
gland | 3.22e-14 | 65 |
gut epithelium | 6.78e-14 | 55 |
endocrine system | 9.10e-13 | 72 |
mesenchyme | 1.84e-12 | 61 |
entire embryonic mesenchyme | 1.84e-12 | 61 |
unilaminar epithelium | 1.84e-11 | 66 |
subdivision of trunk | 1.84e-11 | 66 |
endo-epithelium | 6.23e-11 | 69 |
trunk region element | 1.88e-09 | 79 |
foregut | 2.53e-09 | 80 |
trunk | 3.38e-08 | 90 |
tube | 9.12e-08 | 114 |
anatomical conduit | 3.37e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.