FFCP PHASE1:Mm9::chr2:119063218..119063244,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20732|HGNC=|MCL_coexpression_id=12|UniProt=Q9R097|association_with_transcript=5bp_to_ENSMUST00000110816,uc008ltl.1_5end|description=CAGE_peak_4_at_Spint1_5end|id=chr2:119063218..119063244,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,3.54e-07,9;CL:0002251,3.54e-07,9;CL:0000066,9.14e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.14e-24!59;UBERON:0000160!4.44e-24!43;UBERON:0004119!3.07e-18!130;UBERON:0000925!3.07e-18!130;UBERON:0006595!3.07e-18!130;UBERON:0001007!1.31e-17!128;UBERON:0001555!1.31e-17!128;UBERON:0007026!1.31e-17!128;UBERON:0004921!2.33e-16!126;UBERON:0004185!2.33e-16!126;UBERON:0000344!1.02e-10!15;UBERON:0002108!2.03e-09!16;UBERON:0001242!2.76e-09!13;UBERON:0000060!2.76e-09!13;UBERON:0001262!2.76e-09!13;UBERON:0004786!2.76e-09!13;UBERON:0004923!7.68e-08!24;UBERON:0001045!2.95e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-20,31;UBERON:0005409,1.78e-19,47;UBERON:0000344,2.84e-12,15;UBERON:0004119,3.37e-12,118;UBERON:0000925,3.37e-12,118;UBERON:0006595,3.37e-12,118;UBERON:0001007,1.25e-11,116;UBERON:0001555,1.25e-11,116;UBERON:0007026,1.25e-11,116;UBERON:0001242,1.35e-10,13;UBERON:0001262,1.35e-10,13;UBERON:0004786,1.35e-10,13;UBERON:0004921,1.62e-10,114;UBERON:0004923,3.85e-08,24;UBERON:0000485,1.47e-07,11;UBERON:0001264,1.52e-07,12;UBERON:0007023,2.69e-07,51;UBERON:0003350,3.54e-07,9;UBERON:0004808,3.54e-07,9;UBERON:0001277,3.54e-07,9|phase1_expression=2.5623815536767,50.6014341077074,56.874904923692,48.9992022317065,63.6137577031861,20.4812711732506,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,33.7584012094088,39.9172149056876,39.6220055239364,38.3378176581577,26.7184328530502,57.7671195147377,44.1052727079879,30.1553494491214,0,0,0,4.33277429626912,5.65197794218874,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,3.08977724289854,0,0,0,4.3661460130771,0,0,0,12.3399893376392,16.4683912558814,11.62706223534,6.62266502370548,0,0,0.173485326766136,0,0,0,0,0,30.6521759990624,0,0,0,0,0,18.6391761218122,0,0,37.8076441708715,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.746441823660558,4.80173241023982,6.10281382070775,0.390361328888111,0.459804208866946,1.0803727788321,0.60281927134286,0.272145996605311,0.2562274405697,0.187403449119458,3.3631438196072,0.215567992932842,0,0,1.31517439456545,2.22437799380478,3.83077383174383,2.26360350048738,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,61.7883124179702,25.1228038330367,0.853153002140936,1.16118335930219,4.12375876230699,7.26060688644033,8.67274370994994,9.89173255785308,24.2009821387701,17.9521860649172,18.0961350336194,17.7071260116624,20.6661932346267,22.4704852163555,23.9913235360911,24.2952353370328,1.70701110857774,0.799739588268102,6.76246414038483,1.83286195060783,1.74557238450863,3.7873342740772,4.11037491307672,6.7900668070617,6.12295038581362,6.41665252393363,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,4.80358294433172,0.37898282354097,0.977789858652155,1.18821560042632,1.17345124144251,2.84760637651087,3.80869825417622,6.04914308359176,1.26108115284953,1.99318220683897,2.07291199254733,3.27726629431476,3.45369963731791,3.03763023021174,0,0,13.769399644533,6.07060841870411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,0.534196811001766,1.46598263418218,2.8044920905331,17.2568679841952,4.85561272309963,4.53485335447127,8.86443874852721,7.97315110778086,15.0643222492524,11.3708448994017,5.45300594216258,6.41695281092498,7.26884543252377,13.7044191147498,21.6584640821192,3.74483566329167,0.18006109403131,1.4229455216103,2.14337035031592,3.01478397191865,1.96205699362278,1.31639216481697,5.48036908406279,1.17335854031855,8.26145076368899,10.5853631066382,5.11147384118588,5.00539722757307,4.40284351975538,6.68485126417564,6.72977688954751,23.3184669303881,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,12.4107180341965,1.10717597753397,4.06638934253697,5.29226170026826,7.10900206449194,5.8957892211468,7.41753905116514,8.84391976261094,9.16145796944104,24.6268449254406,16.776161453347,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0.241584120826006,0.576060012515731,1.26404448251271,1.62180172232131,1.64337531463724,0.649604114888975,0.716106782669926,0.596044064343795,1.56254084375959,0.886137163047463,0.100966449948148,0.304827226619999,0.907435666231565,1.36441033035653,1.15454209968395,0.935015217452552,9.9761368790693,4.66170502085536,1.16628013592318,5.03653849092235,12.9437028001568,10.1348536743638,7.14291334642334,18.4356806007997,10.5330141847426,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.972426868273176,0.419226325255965,0,1.33348036680969,1.03017528619447,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,0.655490552289177,1.15245274328765,0.976402972245426,0.476293691283074,1.62238056322798,0.964546102318525,0.412085900803307,1.76638704161277,1.37147700954166,0.354951612318675,0.953744759789284,0.290692833264657,2.07040636913727,0.676916863133412,0.73171189149109,0.263069711437843,1.08643291076689,0,0.830445126869219,0.689531376628944,1.22769312950907,0.929621047115796,1.73615949883027,1.49886346762768,2.10538447600868,1.28922632428979,0.191288332068843,0.882365676478062,0|short_description=p4@Spint1}} | ||
|EntrezGene=20732 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q9R097 | |||
|association_with_transcript=5bp_to_ENSMUST00000110816,uc008ltl.1_5end | |||
|description=CAGE_peak_4_at_Spint1_5end | |||
|id=chr2:119063218..119063244,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.54e-07,9;CL:0002251,3.54e-07,9;CL:0000066,9.14e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.14e-24!59;UBERON:0000160!4.44e-24!43;UBERON:0004119!3.07e-18!130;UBERON:0000925!3.07e-18!130;UBERON:0006595!3.07e-18!130;UBERON:0001007!1.31e-17!128;UBERON:0001555!1.31e-17!128;UBERON:0007026!1.31e-17!128;UBERON:0004921!2.33e-16!126;UBERON:0004185!2.33e-16!126;UBERON:0000344!1.02e-10!15;UBERON:0002108!2.03e-09!16;UBERON:0001242!2.76e-09!13;UBERON:0000060!2.76e-09!13;UBERON:0001262!2.76e-09!13;UBERON:0004786!2.76e-09!13;UBERON:0004923!7.68e-08!24;UBERON:0001045!2.95e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-20,31;UBERON:0005409,1.78e-19,47;UBERON:0000344,2.84e-12,15;UBERON:0004119,3.37e-12,118;UBERON:0000925,3.37e-12,118;UBERON:0006595,3.37e-12,118;UBERON:0001007,1.25e-11,116;UBERON:0001555,1.25e-11,116;UBERON:0007026,1.25e-11,116;UBERON:0001242,1.35e-10,13;UBERON:0001262,1.35e-10,13;UBERON:0004786,1.35e-10,13;UBERON:0004921,1.62e-10,114;UBERON:0004923,3.85e-08,24;UBERON:0000485,1.47e-07,11;UBERON:0001264,1.52e-07,12;UBERON:0007023,2.69e-07,51;UBERON:0003350,3.54e-07,9;UBERON:0004808,3.54e-07,9;UBERON:0001277,3.54e-07,9 | |||
|phase1_expression=2.5623815536767,50.6014341077074,56.874904923692,48.9992022317065,63.6137577031861,20.4812711732506,19.3898491694286,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,33.7584012094088,39.9172149056876,39.6220055239364,38.3378176581577,26.7184328530502,57.7671195147377,44.1052727079879,30.1553494491214,0,0,0,4.33277429626912,5.65197794218874,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,3.08977724289854,0,0,0,4.3661460130771,0,0,0,12.3399893376392,16.4683912558814,11.62706223534,6.62266502370548,0,0,0.173485326766136,0,0,0,0,0,30.6521759990624,0,0,0,0,0,18.6391761218122,0,0,37.8076441708715,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.746441823660558,4.80173241023982,6.10281382070775,0.390361328888111,0.459804208866946,1.0803727788321,0.60281927134286,0.272145996605311,0.2562274405697,0.187403449119458,3.3631438196072,0.215567992932842,0,0,1.31517439456545,2.22437799380478,3.83077383174383,2.26360350048738,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,61.7883124179702,25.1228038330367,0.853153002140936,1.16118335930219,4.12375876230699,7.26060688644033,8.67274370994994,9.89173255785308,24.2009821387701,17.9521860649172,18.0961350336194,17.7071260116624,20.6661932346267,22.4704852163555,23.9913235360911,24.2952353370328,1.70701110857774,0.799739588268102,6.76246414038483,1.83286195060783,1.74557238450863,3.7873342740772,4.11037491307672,6.7900668070617,6.12295038581362,6.41665252393363,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,4.80358294433172,0.37898282354097,0.977789858652155,1.18821560042632,1.17345124144251,2.84760637651087,3.80869825417622,6.04914308359176,1.26108115284953,1.99318220683897,2.07291199254733,3.27726629431476,3.45369963731791,3.03763023021174,0,0,13.769399644533,6.07060841870411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,0.534196811001766,1.46598263418218,2.8044920905331,17.2568679841952,4.85561272309963,4.53485335447127,8.86443874852721,7.97315110778086,15.0643222492524,11.3708448994017,5.45300594216258,6.41695281092498,7.26884543252377,13.7044191147498,21.6584640821192,3.74483566329167,0.18006109403131,1.4229455216103,2.14337035031592,3.01478397191865,1.96205699362278,1.31639216481697,5.48036908406279,1.17335854031855,8.26145076368899,10.5853631066382,5.11147384118588,5.00539722757307,4.40284351975538,6.68485126417564,6.72977688954751,23.3184669303881,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,12.4107180341965,1.10717597753397,4.06638934253697,5.29226170026826,7.10900206449194,5.8957892211468,7.41753905116514,8.84391976261094,9.16145796944104,24.6268449254406,16.776161453347,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0.241584120826006,0.576060012515731,1.26404448251271,1.62180172232131,1.64337531463724,0.649604114888975,0.716106782669926,0.596044064343795,1.56254084375959,0.886137163047463,0.100966449948148,0.304827226619999,0.907435666231565,1.36441033035653,1.15454209968395,0.935015217452552,9.9761368790693,4.66170502085536,1.16628013592318,5.03653849092235,12.9437028001568,10.1348536743638,7.14291334642334,18.4356806007997,10.5330141847426,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.972426868273176,0.419226325255965,0,1.33348036680969,1.03017528619447,0.962757628775446,1.26348605881899,1.2673964994512,1.50901073108861,0.655490552289177,1.15245274328765,0.976402972245426,0.476293691283074,1.62238056322798,0.964546102318525,0.412085900803307,1.76638704161277,1.37147700954166,0.354951612318675,0.953744759789284,0.290692833264657,2.07040636913727,0.676916863133412,0.73171189149109,0.263069711437843,1.08643291076689,0,0.830445126869219,0.689531376628944,1.22769312950907,0.929621047115796,1.73615949883027,1.49886346762768,2.10538447600868,1.28922632428979,0.191288332068843,0.882365676478062,0 | |||
|short_description=p4@Spint1 | |||
}} |
Revision as of 21:46, 13 September 2013
Short description: | p4@Spint1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Spint1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 5bp_to_ENSMUST00000110816, uc008ltl.1_5end |
EntrezGene: | Spint1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.54e-07 | 9 |
epithelial cell of alimentary canal | 3.54e-07 | 9 |
epithelial cell | 9.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.46e-20 | 31 |
gastrointestinal system | 1.78e-19 | 47 |
mucosa | 2.84e-12 | 15 |
endoderm-derived structure | 3.37e-12 | 118 |
endoderm | 3.37e-12 | 118 |
presumptive endoderm | 3.37e-12 | 118 |
digestive system | 1.25e-11 | 116 |
digestive tract | 1.25e-11 | 116 |
primitive gut | 1.25e-11 | 116 |
intestinal mucosa | 1.35e-10 | 13 |
wall of intestine | 1.35e-10 | 13 |
gastrointestinal system mucosa | 1.35e-10 | 13 |
subdivision of digestive tract | 1.62e-10 | 114 |
organ component layer | 3.85e-08 | 24 |
simple columnar epithelium | 1.47e-07 | 11 |
pancreas | 1.52e-07 | 12 |
adult organism | 2.69e-07 | 51 |
epithelium of mucosa | 3.54e-07 | 9 |
gastrointestinal system epithelium | 3.54e-07 | 9 |
intestinal epithelium | 3.54e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.