FFCP PHASE1:Mm9::chr7:20282392..20282404,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=200|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20282392..20282404,-|id=chr7:20282392..20282404,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,1.70e-09,3;CL:0002540,1.70e-09,3;CL:0000182,2.72e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.54e-13!22;UBERON:0007499!7.54e-13!22;UBERON:0006925!7.54e-13!22;UBERON:0009497!7.54e-13!22;UBERON:0000015!7.54e-13!22;UBERON:0002423!7.54e-13!22;UBERON:0006235!7.54e-13!22;UBERON:0008835!7.54e-13!22;UBERON:0003894!7.54e-13!22;UBERON:0004161!7.54e-13!22;UBERON:0008836!7.54e-13!22;UBERON:0009854!6.81e-12!23;UBERON:0009856!6.81e-12!23;UBERON:0002365!1.80e-11!25;UBERON:0002330!1.80e-11!25;UBERON:0000025!2.15e-09!114;UBERON:0001017!3.61e-09!73;UBERON:0005743!3.61e-09!73;UBERON:0000073!6.48e-09!75;UBERON:0001016!6.48e-09!75;UBERON:0004111!2.44e-08!122;UBERON:0004121!3.77e-08!102;UBERON:0000924!3.77e-08!102;UBERON:0006601!3.77e-08!102;UBERON:0005256!9.54e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.82e-28,22;UBERON:0007499,9.82e-28,22;UBERON:0006925,9.82e-28,22;UBERON:0009497,9.82e-28,22;UBERON:0000015,9.82e-28,22;UBERON:0002423,9.82e-28,22;UBERON:0006235,9.82e-28,22;UBERON:0008835,9.82e-28,22;UBERON:0003894,9.82e-28,22;UBERON:0004161,9.82e-28,22;UBERON:0008836,9.82e-28,22;UBERON:0009854,2.31e-26,23;UBERON:0009856,2.31e-26,23;UBERON:0002365,5.99e-24,25;UBERON:0002330,5.99e-24,25;UBERON:0005256,3.69e-13,45;UBERON:0003914,1.97e-12,47;UBERON:0005172,2.18e-10,49;UBERON:0005173,2.18e-10,49;UBERON:0002417,2.18e-10,49;UBERON:0000916,2.18e-10,49;UBERON:0003929,7.36e-09,55;UBERON:0003104,1.08e-08,61;UBERON:0009142,1.08e-08,61;UBERON:0000025,1.69e-08,114;UBERON:0002368,7.97e-08,60;UBERON:0000490,9.52e-08,66;UBERON:0004111,1.39e-07,122;UBERON:0002530,5.93e-07,65;UBERON:0000949,8.48e-07,72;UBERON:0009569,8.53e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,1.1665793944457,0.979904951377538,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,24.2972923665978,34.6103226898441,26.9982443679518,7.78960287347852,10.7581125490035,0,0.135005938331691,0,0.571301968807607,1.98781686856452,0,0,0,4.40463523997555,0.766124028511126,0.768032666281217,0,0.0914876436024097,0,1.67509799400829,2.8138130501584,0.916789486660861,0.294628585473668,0.711858403995515,0,0,0.0755715601067855,0.869593466105033,14.6272059086836,11.5595126730318,12.4131734076698,18.1937396885347,14.3368603871147,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0,0,0.304465478312141,0,0.301445281105245,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0.299581278809645,0.915001205637253,0,0,0.255715457330331,1.0389402227978,0.162241263067758,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,6.52195779591728,0,0.196558995113203,0,0.202860121388503,0.482354319504834,1.2731292589071,2.01387296215567,3.89124544260085,4.66754402419738,27.3159592401974,6.32639611036456,8.11297950097858,5.30415643688935,3.58794827043824,2.41221760681684,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0.891194696329576,0.849229592366497,0.809621403349789,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,1.84130094602871,0,0.68741272937475,2.05524755931193,0.755393897389701,0,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.37456602987953,0,0.0574354689556133,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0,0.188218760830661,0.084614607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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=200 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:20282392..20282404,- | |||
|id=chr7:20282392..20282404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.70e-09,3;CL:0002540,1.70e-09,3;CL:0000182,2.72e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.54e-13!22;UBERON:0007499!7.54e-13!22;UBERON:0006925!7.54e-13!22;UBERON:0009497!7.54e-13!22;UBERON:0000015!7.54e-13!22;UBERON:0002423!7.54e-13!22;UBERON:0006235!7.54e-13!22;UBERON:0008835!7.54e-13!22;UBERON:0003894!7.54e-13!22;UBERON:0004161!7.54e-13!22;UBERON:0008836!7.54e-13!22;UBERON:0009854!6.81e-12!23;UBERON:0009856!6.81e-12!23;UBERON:0002365!1.80e-11!25;UBERON:0002330!1.80e-11!25;UBERON:0000025!2.15e-09!114;UBERON:0001017!3.61e-09!73;UBERON:0005743!3.61e-09!73;UBERON:0000073!6.48e-09!75;UBERON:0001016!6.48e-09!75;UBERON:0004111!2.44e-08!122;UBERON:0004121!3.77e-08!102;UBERON:0000924!3.77e-08!102;UBERON:0006601!3.77e-08!102;UBERON:0005256!9.54e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.82e-28,22;UBERON:0007499,9.82e-28,22;UBERON:0006925,9.82e-28,22;UBERON:0009497,9.82e-28,22;UBERON:0000015,9.82e-28,22;UBERON:0002423,9.82e-28,22;UBERON:0006235,9.82e-28,22;UBERON:0008835,9.82e-28,22;UBERON:0003894,9.82e-28,22;UBERON:0004161,9.82e-28,22;UBERON:0008836,9.82e-28,22;UBERON:0009854,2.31e-26,23;UBERON:0009856,2.31e-26,23;UBERON:0002365,5.99e-24,25;UBERON:0002330,5.99e-24,25;UBERON:0005256,3.69e-13,45;UBERON:0003914,1.97e-12,47;UBERON:0005172,2.18e-10,49;UBERON:0005173,2.18e-10,49;UBERON:0002417,2.18e-10,49;UBERON:0000916,2.18e-10,49;UBERON:0003929,7.36e-09,55;UBERON:0003104,1.08e-08,61;UBERON:0009142,1.08e-08,61;UBERON:0000025,1.69e-08,114;UBERON:0002368,7.97e-08,60;UBERON:0000490,9.52e-08,66;UBERON:0004111,1.39e-07,122;UBERON:0002530,5.93e-07,65;UBERON:0000949,8.48e-07,72;UBERON:0009569,8.53e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,1.1665793944457,0.979904951377538,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,24.2972923665978,34.6103226898441,26.9982443679518,7.78960287347852,10.7581125490035,0,0.135005938331691,0,0.571301968807607,1.98781686856452,0,0,0,4.40463523997555,0.766124028511126,0.768032666281217,0,0.0914876436024097,0,1.67509799400829,2.8138130501584,0.916789486660861,0.294628585473668,0.711858403995515,0,0,0.0755715601067855,0.869593466105033,14.6272059086836,11.5595126730318,12.4131734076698,18.1937396885347,14.3368603871147,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,1.94112595522402,0.517875767294343,0,0,0.304465478312141,0,0.301445281105245,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0.127070227073065,0.299581278809645,0.915001205637253,0,0,0.255715457330331,1.0389402227978,0.162241263067758,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,6.52195779591728,0,0.196558995113203,0,0.202860121388503,0.482354319504834,1.2731292589071,2.01387296215567,3.89124544260085,4.66754402419738,27.3159592401974,6.32639611036456,8.11297950097858,5.30415643688935,3.58794827043824,2.41221760681684,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0.345369963731791,0,1.50791283939272,0.54390568381871,0.491764273019036,0,0.321101179975584,0.468846746368813,0,0,0.315508219416257,0,0.215423397732799,0.477937595905104,0.891194696329576,0.849229592366497,0.809621403349789,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,1.03135543248187,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0,0,0,0,1.84130094602871,0,0.68741272937475,2.05524755931193,0.755393897389701,0,0.45032120322422,0.453142408984205,1.03552062350364,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.37456602987953,0,0.0574354689556133,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.463735671240843 | |||
|short_description=p@chr7:20282392..20282404,- | |||
}} |
Revision as of 12:44, 14 September 2013
Short description: | p@chr7:20282392..20282404, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282392..20282404, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.70e-09 | 3 |
mesenchymal stem cell of the bone marrow | 1.70e-09 | 3 |
hepatocyte | 2.72e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 9.82e-28 | 22 |
epithelial sac | 9.82e-28 | 22 |
digestive gland | 9.82e-28 | 22 |
epithelium of foregut-midgut junction | 9.82e-28 | 22 |
anatomical boundary | 9.82e-28 | 22 |
hepatobiliary system | 9.82e-28 | 22 |
foregut-midgut junction | 9.82e-28 | 22 |
hepatic diverticulum | 9.82e-28 | 22 |
liver primordium | 9.82e-28 | 22 |
septum transversum | 9.82e-28 | 22 |
liver bud | 9.82e-28 | 22 |
digestive tract diverticulum | 2.31e-26 | 23 |
sac | 2.31e-26 | 23 |
exocrine gland | 5.99e-24 | 25 |
exocrine system | 5.99e-24 | 25 |
trunk mesenchyme | 3.69e-13 | 45 |
epithelial tube | 1.97e-12 | 47 |
abdomen element | 2.18e-10 | 49 |
abdominal segment element | 2.18e-10 | 49 |
abdominal segment of trunk | 2.18e-10 | 49 |
abdomen | 2.18e-10 | 49 |
gut epithelium | 7.36e-09 | 55 |
mesenchyme | 1.08e-08 | 61 |
entire embryonic mesenchyme | 1.08e-08 | 61 |
tube | 1.69e-08 | 114 |
endocrine gland | 7.97e-08 | 60 |
unilaminar epithelium | 9.52e-08 | 66 |
anatomical conduit | 1.39e-07 | 122 |
gland | 5.93e-07 | 65 |
endocrine system | 8.48e-07 | 72 |
subdivision of trunk | 8.53e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.