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FFCP PHASE1:Mm9::chr7:148514080..148514108,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=54006|HGNC=|MCL_coexpression_id=508|UniProt=Q9Z1T5,Q8BUW3|association_with_transcript=-456bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end|description=CAGE_peak_4_at_Deaf1_5end|id=chr7:148514080..148514108,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,7.59e-08,25;CL:0000791,3.37e-07,9;CL:0000789,3.37e-07,9;CL:0002420,3.37e-07,9;CL:0002419,3.37e-07,9;CL:0000790,3.37e-07,9;CL:0000624,8.08e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.64e-11!29;UBERON:0006562!2.21e-10!24;UBERON:0001557!2.21e-10!24;UBERON:0001042!2.21e-10!24;UBERON:0008814!2.21e-10!24;UBERON:0009145!2.21e-10!24;UBERON:0002370!5.05e-10!23;UBERON:0000974!5.05e-10!23;UBERON:0004807!5.05e-10!23;UBERON:0005058!5.05e-10!23;UBERON:0003351!5.05e-10!23;UBERON:0009113!5.05e-10!23;UBERON:0003295!5.05e-10!23;UBERON:0009722!5.05e-10!23;UBERON:0005562!5.05e-10!23;UBERON:0007690!5.05e-10!23;UBERON:0002390!2.65e-09!45;UBERON:0003061!2.65e-09!45;UBERON:0003408!2.74e-09!24;UBERON:0002193!6.27e-09!48;UBERON:0000072!1.49e-08!27;UBERON:0000065!9.21e-08!41;UBERON:0001004!2.34e-07!42;UBERON:0003081!8.97e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.19e-13,29;UBERON:0005057,1.19e-13,29;UBERON:0006562,2.82e-12,24;UBERON:0001557,2.82e-12,24;UBERON:0001042,2.82e-12,24;UBERON:0008814,2.82e-12,24;UBERON:0009145,2.82e-12,24;UBERON:0002370,7.10e-12,23;UBERON:0000974,7.10e-12,23;UBERON:0004807,7.10e-12,23;UBERON:0005058,7.10e-12,23;UBERON:0003351,7.10e-12,23;UBERON:0009113,7.10e-12,23;UBERON:0003295,7.10e-12,23;UBERON:0009722,7.10e-12,23;UBERON:0005562,7.10e-12,23;UBERON:0007690,7.10e-12,23;UBERON:0002390,8.43e-12,45;UBERON:0003061,8.43e-12,45;UBERON:0002193,1.56e-11,48;UBERON:0002405,1.56e-11,48;UBERON:0003408,6.83e-11,24;UBERON:0000077,1.64e-10,35;UBERON:0000072,3.84e-10,27;UBERON:0007811,9.95e-09,36;UBERON:0000065,2.50e-08,41;UBERON:0001004,8.21e-08,42;UBERON:0001048,1.19e-07,134;UBERON:0000153,1.93e-07,43;UBERON:0003081,5.47e-07,87|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0.90739263392049,3.00537437967808,1.34303417529512,1.40167584357315,4.9066862907799,13.6565060487117,15.4482587372516,7.87602653837323,7.17949430958028,4.79362043807376,5.85716696207283,3.99731714178795,4.04950534779652,6.29605690315332,3.47008381894061,2.74228867211478,2.54633791078818,2.46625541438102,1.58865521921416,0.522399578277871,0.159992422793407,1.14704640533585,0,0.430761996159075,0.861884930743556,0.760093677825496,0.504060259519861,0.443461021310609,3.81018404075779,6.1506478758457,0,1.44425809875637,1.82858109894342,1.22501613757421,0.837063261473815,0.7813353445238,1.57057123192139,0,2.04913645487534,0.485510353031154,0.125896817975577,0.506884656097573,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.55994568650145,0,3.52343472721246,5.80289713609076,2.68875039313971,1.02903774414379,0.573066879877513,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,2.71075625655306,0.889294796111139,1.3498495759221,0,0.7104801149461,0,0.384218305321555,1.24427534770173,1.4850653216486,1.26194976810829,0.856952953211411,0.883474163806454,0.979926393719632,1.91690942036473,0,1.10115880999389,0.255374676170375,0.768032666281217,1.18697658957174,1.28082701043374,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0,0.854230084794618,1.67759501242771,0.530083353332288,0.68014404096107,0.869593466105033,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,0.35333957451034,0.704217098883403,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.91347103775248,3.10725460376606,0.445326417194474,0.520455980298408,0,0.922461989024234,0.301445281105245,0.470354828542819,0.251333182659351,1.73036477414062,1.44599356919912,2.65383165584962,1.61766849947409,3.75430581382669,2.42437626567611,0,1.17112318804619,0.83778682725382,1.02182822083437,1.31796636956512,1.19980546198682,1.65191295194984,0.449371918214468,0.915001205637253,1.38219787324151,0.173824320192276,1.02286182932132,0.62336413367868,0.486723789203273,1.01839363850316,1.99051152976149,0.505445516867349,0.841767423545896,0.910843100738926,1.14951052216736,1.98068342785884,1.20563854268572,1.42876648217788,1.2811372028485,1.3118241438362,2.32833033665114,2.37124792226126,1.89106080167819,1.05570674498369,0.657587197282725,0.278047249225598,0.696504333044333,1.02891068203972,1.59227413454795,1.40442637462647,0.51469581422943,0.568326998791185,1.24275463521301,0.938104239924385,1.08037236876609,1.89395788468168,0.590292695242212,0.771335564436891,1.16266972375204,1.60964040839772,1.05088808130453,1.81015834904829,1.80584210487005,0.810688095458557,0.438599962275997,1.53685080703735,0.939444931322602,0.210289948564127,0.514523061896422,1.98251269790279,1.85115396664481,0.639864751605702,0.696710015581316,1.9330119198314,1.61346819698674,1.33426826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|EntrezGene=54006
|HGNC=
|MCL_coexpression_id=508
|UniProt=Q9Z1T5,Q8BUW3
|association_with_transcript=-456bp_to_ENSMUST00000080553,NM_016874,NR_027769,uc009kkn.2,uc009kko.2,uc012fwv.1,uc012fww.1_5end
|description=CAGE_peak_4_at_Deaf1_5end
|id=chr7:148514080..148514108,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002031,7.59e-08,25;CL:0000791,3.37e-07,9;CL:0000789,3.37e-07,9;CL:0002420,3.37e-07,9;CL:0002419,3.37e-07,9;CL:0000790,3.37e-07,9;CL:0000624,8.08e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.64e-11!29;UBERON:0006562!2.21e-10!24;UBERON:0001557!2.21e-10!24;UBERON:0001042!2.21e-10!24;UBERON:0008814!2.21e-10!24;UBERON:0009145!2.21e-10!24;UBERON:0002370!5.05e-10!23;UBERON:0000974!5.05e-10!23;UBERON:0004807!5.05e-10!23;UBERON:0005058!5.05e-10!23;UBERON:0003351!5.05e-10!23;UBERON:0009113!5.05e-10!23;UBERON:0003295!5.05e-10!23;UBERON:0009722!5.05e-10!23;UBERON:0005562!5.05e-10!23;UBERON:0007690!5.05e-10!23;UBERON:0002390!2.65e-09!45;UBERON:0003061!2.65e-09!45;UBERON:0003408!2.74e-09!24;UBERON:0002193!6.27e-09!48;UBERON:0000072!1.49e-08!27;UBERON:0000065!9.21e-08!41;UBERON:0001004!2.34e-07!42;UBERON:0003081!8.97e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.19e-13,29;UBERON:0005057,1.19e-13,29;UBERON:0006562,2.82e-12,24;UBERON:0001557,2.82e-12,24;UBERON:0001042,2.82e-12,24;UBERON:0008814,2.82e-12,24;UBERON:0009145,2.82e-12,24;UBERON:0002370,7.10e-12,23;UBERON:0000974,7.10e-12,23;UBERON:0004807,7.10e-12,23;UBERON:0005058,7.10e-12,23;UBERON:0003351,7.10e-12,23;UBERON:0009113,7.10e-12,23;UBERON:0003295,7.10e-12,23;UBERON:0009722,7.10e-12,23;UBERON:0005562,7.10e-12,23;UBERON:0007690,7.10e-12,23;UBERON:0002390,8.43e-12,45;UBERON:0003061,8.43e-12,45;UBERON:0002193,1.56e-11,48;UBERON:0002405,1.56e-11,48;UBERON:0003408,6.83e-11,24;UBERON:0000077,1.64e-10,35;UBERON:0000072,3.84e-10,27;UBERON:0007811,9.95e-09,36;UBERON:0000065,2.50e-08,41;UBERON:0001004,8.21e-08,42;UBERON:0001048,1.19e-07,134;UBERON:0000153,1.93e-07,43;UBERON:0003081,5.47e-07,87
|phase1_expression=0.320297694209588,0.697950815278722,0.454999239389536,0.90739263392049,3.00537437967808,1.34303417529512,1.40167584357315,4.9066862907799,13.6565060487117,15.4482587372516,7.87602653837323,7.17949430958028,4.79362043807376,5.85716696207283,3.99731714178795,4.04950534779652,6.29605690315332,3.47008381894061,2.74228867211478,2.54633791078818,2.46625541438102,1.58865521921416,0.522399578277871,0.159992422793407,1.14704640533585,0,0.430761996159075,0.861884930743556,0.760093677825496,0.504060259519861,0.443461021310609,3.81018404075779,6.1506478758457,0,1.44425809875637,1.82858109894342,1.22501613757421,0.837063261473815,0.7813353445238,1.57057123192139,0,2.04913645487534,0.485510353031154,0.125896817975577,0.506884656097573,0.550640256485045,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.55994568650145,0,3.52343472721246,5.80289713609076,2.68875039313971,1.02903774414379,0.573066879877513,0.515672092277442,0.809265843438391,1.05798195854407,1.90149421051854,2.71075625655306,0.889294796111139,1.3498495759221,0,0.7104801149461,0,0.384218305321555,1.24427534770173,1.4850653216486,1.26194976810829,0.856952953211411,0.883474163806454,0.979926393719632,1.91690942036473,0,1.10115880999389,0.255374676170375,0.768032666281217,1.18697658957174,1.28082701043374,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0,0.854230084794618,1.67759501242771,0.530083353332288,0.68014404096107,0.869593466105033,0,0,0,0,0,0.842666520790511,0.340860645156116,0.259786004602869,0.35333957451034,0.704217098883403,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.91347103775248,3.10725460376606,0.445326417194474,0.520455980298408,0,0.922461989024234,0.301445281105245,0.470354828542819,0.251333182659351,1.73036477414062,1.44599356919912,2.65383165584962,1.61766849947409,3.75430581382669,2.42437626567611,0,1.17112318804619,0.83778682725382,1.02182822083437,1.31796636956512,1.19980546198682,1.65191295194984,0.449371918214468,0.915001205637253,1.38219787324151,0.173824320192276,1.02286182932132,0.62336413367868,0.486723789203273,1.01839363850316,1.99051152976149,0.505445516867349,0.841767423545896,0.910843100738926,1.14951052216736,1.98068342785884,1.20563854268572,1.42876648217788,1.2811372028485,1.3118241438362,2.32833033665114,2.37124792226126,1.89106080167819,1.05570674498369,0.657587197282725,0.278047249225598,0.696504333044333,1.02891068203972,1.59227413454795,1.40442637462647,0.51469581422943,0.568326998791185,1.24275463521301,0.938104239924385,1.08037236876609,1.89395788468168,0.590292695242212,0.771335564436891,1.16266972375204,1.60964040839772,1.05088808130453,1.81015834904829,1.80584210487005,0.810688095458557,0.438599962275997,1.53685080703735,0.939444931322602,0.210289948564127,0.514523061896422,1.98251269790279,1.85115396664481,0.639864751605702,0.696710015581316,1.9330119198314,1.61346819698674,1.33426826306922,1.14135375667535,1.89811624617805,0.329397909448022,1.00534083520108,1.39269530428806,0.58489226135736,1.79763881730844,0.648414149624083,0.199141273254367,1.32767530667157,1.5994791765362,0,0.407302655690628,0.775809948670503,0.771494018793504,0.632365371242573,0,0.31399745568275,0.616985819609003,0,4.00428253718626,3.93117990226406,3.82265591054251,3.44862206360455,3.61765739628625,1.78238096246994,2.5892652370573,1.29708181420028,1.09824565275233,1.43768206527355,0.372140947668503,0.936113019343682,0.505157755894224,0.538192240565737,0,1.66277871149944,0.568474235311454,1.95557971730431,1.86719594352707,1.64283173801951,1.84256883185997,0.714130922658041,1.56106918286239,1.10344600874334,1.32878813789265,0.956728611944923,0.655453258862952,0.690739927463582,1.59113964439663,0,2.71952841909355,1.47529281905711,0.827810238914197,0.481651769963376,0.35163505977661,0.819674726883377,0.757412781613119,2.2085575359138,1.17131623288992,1.50796378412959,0.955875191810208,0.445597348164788,1.69845918473299,0,1.16902343164525,0.395287777946524,1.60660658210904,0.99358059645788,1.42452482933804,1.14020871547503,1.64970122972535,0,1.45668381692989,1.51161778482376,1.32023555829129,0,0,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,0,1.03135543248187,1.36175842301515,0.36012218806262,1.4229455216103,1.50035924522115,1.06404140185364,0.535106452806212,0.822745103010605,1.2178597964584,2.11204537257339,0.847328283455281,0,1.48397627647332,2.09903754704677,1.32688434841943,1.07435109602823,0.820704498725306,0.582961673259701,1.29797711407357,3.93003025835061,0.412773735926445,2.96311243791539,5.27431679613135,6.15124024744613,2.97411625168479,2.37969801991397,2.23922323717853,3.31679937130617,0,2.53068794864908,2.84647253977588,1.08005340821801,1.88179466413022,1.09181281873089,0.809186078308924,0.495920734352016,0.785267825952089,0.90730481304255,0.621339313086926,3.94585057078933,3.58839710505549,1.98550188548517,1.36115831840833,1.6790777052105,1.18269287843545,1.87771581833206,4.03633593016245,9.96163772044253,7.00593950395418,3.16833006883652,8.53230025696081,1.62180172232131,2.46506297195585,2.98817892848929,8.59328139203911,6.15912199821921,9.49544051207754,10.9290250109187,10.1976114447629,16.384463430825,11.4941851055998,13.7415611843051,10.1022433722346,15.3108741857855,2.49403421976732,4.66170502085536,6.45939767588225,3.69346156000973,1.15913756419314,0.375364950902364,1.64836461840539,0.857473516316263,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0.906284817968409,0,1.24544817101012,3.59122386060928,1.19513524027894,2.18796045361465,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.50695859978048,1.32038438970253,1.03005658216871,0.640251524048693,1.09127391015665,0.952587382566147,0.811190281613988,0.77163688185482,1.23625770240992,1.32479028120958,0,1.06485483695602,1.43061713968393,1.45346416632329,1.03520318456864,1.09998990259179,0.914639864363863,1.31534855718921,1.08643291076689,1.12228454331548,0.949080144993393,0.985044823755635,0.409231043169689,0.464810523557898,0.771626443924566,0.999242311751784,0.701794825336225,0.859484216193193,2.10417165275728,1.10295709559758,1.62307484934295
|short_description=p4@Deaf1
}}

Revision as of 12:18, 14 September 2013

Short description:p4@Deaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Deaf1_5end
Coexpression cluster:MCL_coexpression_mm9:508
Association with transcript: -456bp_to_ENSMUST00000080553, NM_016874, NR_027769, uc009kkn.2, uc009kko.2, uc012fwv.1, uc012fww.1_5end
EntrezGene:Deaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Deaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D99.96
testis, neonate N20.CNhs11110.839-18H37.01
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C18.59
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F89.50
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C410.20
thymus, neonate N07.CNhs11211.713-19D316.38
thymus, neonate N10.CNhs11194.748-24E411.49
thymus, neonate N20.CNhs11186.820-7A213.74
thymus, neonate N25.CNhs11125.1362-25G710.10
thymus, neonate N30.CNhs11132.1393-42G215.31
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.19e-1329
immune organ1.19e-1329
pharynx2.82e-1224
upper respiratory tract2.82e-1224
chordate pharynx2.82e-1224
pharyngeal arch system2.82e-1224
pharyngeal region of foregut2.82e-1224
thymus7.10e-1223
neck7.10e-1223
respiratory system epithelium7.10e-1223
hemolymphoid system gland7.10e-1223
pharyngeal epithelium7.10e-1223
thymic region7.10e-1223
pharyngeal gland7.10e-1223
entire pharyngeal arch endoderm7.10e-1223
thymus primordium7.10e-1223
early pharyngeal endoderm7.10e-1223
hematopoietic system8.43e-1245
blood island8.43e-1245
hemolymphoid system1.56e-1148
immune system1.56e-1148
gland of gut6.83e-1124
mixed endoderm/mesoderm-derived structure1.64e-1035
segment of respiratory tract3.84e-1027
craniocervical region9.95e-0936
respiratory tract2.50e-0841
respiratory system8.21e-0842
primordium1.19e-07134
anterior region of body1.93e-0743
lateral plate mesoderm5.47e-0787







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