FFCP PHASE1:Mm9::chr13:24006845..24006858,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319848|HGNC=|MCL_coexpression_id=12|UniProt=Q5NCM1|association_with_transcript=15bp_to_ENSMUST00000021769_5end|description=CAGE_peak_2_at_Slc17a4_5end|id=chr13:24006845..24006858,-|ontology_enrichment_celltype=CL:0002563!2.72e-08!9;CL:0002251!2.72e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-10,9;CL:0002251,2.08e-10,9;CL:0000066,9.50e-09,25;CL:0000239,1.24e-07,6;CL:0000677,1.24e-07,6;CL:0000584,1.24e-07,6;CL:0000223,1.67e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.79e-26!43;UBERON:0005409!8.49e-26!59;UBERON:0001007!2.49e-13!128;UBERON:0001555!2.49e-13!128;UBERON:0007026!2.49e-13!128;UBERON:0004119!2.58e-13!130;UBERON:0000925!2.58e-13!130;UBERON:0006595!2.58e-13!130;UBERON:0000344!4.43e-13!15;UBERON:0004921!3.80e-12!126;UBERON:0004185!3.80e-12!126;UBERON:0001242!2.18e-11!13;UBERON:0000060!2.18e-11!13;UBERON:0001262!2.18e-11!13;UBERON:0004786!2.18e-11!13;UBERON:0004923!6.58e-10!24;UBERON:0003350!2.72e-08!9;UBERON:0004808!2.72e-08!9;UBERON:0001277!2.72e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.22e-34,31;UBERON:0005409,6.02e-26,47;UBERON:0000344,1.07e-16,15;UBERON:0001242,1.79e-14,13;UBERON:0001262,1.79e-14,13;UBERON:0004786,1.79e-14,13;UBERON:0001007,5.48e-14,116;UBERON:0001555,5.48e-14,116;UBERON:0007026,5.48e-14,116;UBERON:0004119,1.74e-13,118;UBERON:0000925,1.74e-13,118;UBERON:0006595,1.74e-13,118;UBERON:0004921,1.44e-12,114;UBERON:0003350,2.08e-10,9;UBERON:0004808,2.08e-10,9;UBERON:0001277,2.08e-10,9;UBERON:0004923,1.40e-08,24;UBERON:0000485,4.72e-08,11|phase1_expression=0,12.2141392673776,20.0199665331396,37.2030979907401,28.5510566069418,11.0800319461847,7.94282978024787,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,20.4790301175561,20.188016733911,12.0588712464154,16.3689558540448,12.9282739611533,14.251756459228,17.6421090831952,6.43018480900384,0,0,0,13.2871745085586,9.64160943079256,14.0876855821035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,4.75979933595425,10.7940638327563,11.0461990966104,6.72040330646003,4.21333260395256,0,0,0,0,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0.494389935468748,0,0,0,0,0,16.775258509631,0,0,21.7138496927303,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.6046957459495,7.66906643324278,1.91959425481711,4.64473343720877,7.08771037271513,16.9414160683608,17.3454874198999,26.0609107774206,26.5736274464927,26.0224348463937,25.3848560888272,35.4142520233248,31.3892180261783,17.9763881730844,36.5273304288233,61.1363708890907,0.758671603812327,1.14248512609729,1.1270773567308,2.8511185898344,3.10323979468201,1.96380295692892,1.96033265085198,0.885660887877613,0.31399745568275,0.987177311374404,6.52195779591728,0,0.196558995113203,0,0,0,0,0,0.648540907100142,3.84385978463314,4.31304619582064,9.30352369171258,17.1620720213008,13.8918382870911,13.0960111870996,7.23665282045051,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971122544619926,0.604647113929502,1.69744571780308,0.590603785761546,1.22974059177571,7.49442050187841,1.09060118843252,2.13898427030833,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0,0.164140899745061,30.3140070095045,0,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,1.82987520414164,2.48412283890143,0.209088296014469,1.31017538247707,0.404593039154462,1.1571483801547,0.26175594198403,41.4767914533737,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,5.06742683718191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,1.11123363900808,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,1.69763707247469,1.591905626988,1.40855335290712,1.14870937911227,1.90517476513229,0.463537303779422,1.35036454324594,1.23625770240992,1.91358596174717,2.05721551431249,0.70990322463735,0.715308569841963,1.30811774969096,1.03520318456864,0.846146078916765,0.914639864363863,0.789209134313529,1.08643291076689,2.24456908663095,0.949080144993393,0.492522411877817,1.22769312950907,1.23949472948773,0.771626443924566,0,2.10538447600868,2.36358159453128,0.191288332068843,0,0|short_description=p2@Slc17a4}} | ||
|EntrezGene=319848 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q5NCM1 | |||
|association_with_transcript=15bp_to_ENSMUST00000021769_5end | |||
|description=CAGE_peak_2_at_Slc17a4_5end | |||
|id=chr13:24006845..24006858,- | |||
|ontology_enrichment_celltype=CL:0002563!2.72e-08!9;CL:0002251!2.72e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.08e-10,9;CL:0002251,2.08e-10,9;CL:0000066,9.50e-09,25;CL:0000239,1.24e-07,6;CL:0000677,1.24e-07,6;CL:0000584,1.24e-07,6;CL:0000223,1.67e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.79e-26!43;UBERON:0005409!8.49e-26!59;UBERON:0001007!2.49e-13!128;UBERON:0001555!2.49e-13!128;UBERON:0007026!2.49e-13!128;UBERON:0004119!2.58e-13!130;UBERON:0000925!2.58e-13!130;UBERON:0006595!2.58e-13!130;UBERON:0000344!4.43e-13!15;UBERON:0004921!3.80e-12!126;UBERON:0004185!3.80e-12!126;UBERON:0001242!2.18e-11!13;UBERON:0000060!2.18e-11!13;UBERON:0001262!2.18e-11!13;UBERON:0004786!2.18e-11!13;UBERON:0004923!6.58e-10!24;UBERON:0003350!2.72e-08!9;UBERON:0004808!2.72e-08!9;UBERON:0001277!2.72e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.22e-34,31;UBERON:0005409,6.02e-26,47;UBERON:0000344,1.07e-16,15;UBERON:0001242,1.79e-14,13;UBERON:0001262,1.79e-14,13;UBERON:0004786,1.79e-14,13;UBERON:0001007,5.48e-14,116;UBERON:0001555,5.48e-14,116;UBERON:0007026,5.48e-14,116;UBERON:0004119,1.74e-13,118;UBERON:0000925,1.74e-13,118;UBERON:0006595,1.74e-13,118;UBERON:0004921,1.44e-12,114;UBERON:0003350,2.08e-10,9;UBERON:0004808,2.08e-10,9;UBERON:0001277,2.08e-10,9;UBERON:0004923,1.40e-08,24;UBERON:0000485,4.72e-08,11 | |||
|phase1_expression=0,12.2141392673776,20.0199665331396,37.2030979907401,28.5510566069418,11.0800319461847,7.94282978024787,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0,0,20.4790301175561,20.188016733911,12.0588712464154,16.3689558540448,12.9282739611533,14.251756459228,17.6421090831952,6.43018480900384,0,0,0,13.2871745085586,9.64160943079256,14.0876855821035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,4.75979933595425,10.7940638327563,11.0461990966104,6.72040330646003,4.21333260395256,0,0,0,0,0,0,0,0,0,0,6.73684890342454,0,0,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,0.494389935468748,0,0,0,0,0,16.775258509631,0,0,21.7138496927303,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,82.6046957459495,7.66906643324278,1.91959425481711,4.64473343720877,7.08771037271513,16.9414160683608,17.3454874198999,26.0609107774206,26.5736274464927,26.0224348463937,25.3848560888272,35.4142520233248,31.3892180261783,17.9763881730844,36.5273304288233,61.1363708890907,0.758671603812327,1.14248512609729,1.1270773567308,2.8511185898344,3.10323979468201,1.96380295692892,1.96033265085198,0.885660887877613,0.31399745568275,0.987177311374404,6.52195779591728,0,0.196558995113203,0,0,0,0,0,0.648540907100142,3.84385978463314,4.31304619582064,9.30352369171258,17.1620720213008,13.8918382870911,13.0960111870996,7.23665282045051,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971122544619926,0.604647113929502,1.69744571780308,0.590603785761546,1.22974059177571,7.49442050187841,1.09060118843252,2.13898427030833,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0,0,0.164140899745061,30.3140070095045,0,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0,0,0,0,1.82987520414164,2.48412283890143,0.209088296014469,1.31017538247707,0.404593039154462,1.1571483801547,0.26175594198403,41.4767914533737,0,0,0,0,0.194451188344048,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,5.06742683718191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,1.11123363900808,1.23621034343337,0.962757628775446,2.02157769411038,1.2673964994512,1.69763707247469,1.591905626988,1.40855335290712,1.14870937911227,1.90517476513229,0.463537303779422,1.35036454324594,1.23625770240992,1.91358596174717,2.05721551431249,0.70990322463735,0.715308569841963,1.30811774969096,1.03520318456864,0.846146078916765,0.914639864363863,0.789209134313529,1.08643291076689,2.24456908663095,0.949080144993393,0.492522411877817,1.22769312950907,1.23949472948773,0.771626443924566,0,2.10538447600868,2.36358159453128,0.191288332068843,0,0 | |||
|short_description=p2@Slc17a4 | |||
}} |
Revision as of 00:11, 13 September 2013
Short description: | p2@Slc17a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc17a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 15bp_to_ENSMUST00000021769_5end |
EntrezGene: | Slc17a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.08e-10 | 9 |
epithelial cell of alimentary canal | 2.08e-10 | 9 |
epithelial cell | 9.50e-09 | 25 |
brush border epithelial cell | 1.24e-07 | 6 |
gut absorptive cell | 1.24e-07 | 6 |
enterocyte | 1.24e-07 | 6 |
endodermal cell | 1.67e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.22e-34 | 31 |
gastrointestinal system | 6.02e-26 | 47 |
mucosa | 1.07e-16 | 15 |
intestinal mucosa | 1.79e-14 | 13 |
wall of intestine | 1.79e-14 | 13 |
gastrointestinal system mucosa | 1.79e-14 | 13 |
digestive system | 5.48e-14 | 116 |
digestive tract | 5.48e-14 | 116 |
primitive gut | 5.48e-14 | 116 |
endoderm-derived structure | 1.74e-13 | 118 |
endoderm | 1.74e-13 | 118 |
presumptive endoderm | 1.74e-13 | 118 |
subdivision of digestive tract | 1.44e-12 | 114 |
epithelium of mucosa | 2.08e-10 | 9 |
gastrointestinal system epithelium | 2.08e-10 | 9 |
intestinal epithelium | 2.08e-10 | 9 |
organ component layer | 1.40e-08 | 24 |
simple columnar epithelium | 4.72e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.