FFCP PHASE1:Mm9::chr13:24506667..24506683,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=160bp_to_uc007pvs.1_5end|description=CAGE_peak_3_at_uc007pvs.1_5end|id=chr13:24506667..24506683,-|ontology_enrichment_celltype=CL:0000553!1.07e-08!6;CL:0000556!1.07e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,3.83e-21,6;CL:0000556,3.83e-21,6;CL:0000050,4.55e-14,9;CL:0000839,1.07e-09,13;CL:0000763,7.63e-08,16;CL:0002027,2.23e-07,3;CL:0002006,2.23e-07,3;CL:0002024,2.23e-07,3;CL:0002031,6.76e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.12e-14!48;UBERON:0002405!1.00e-13!70;UBERON:0002390!2.93e-11!45;UBERON:0003061!2.93e-11!45;UBERON:0004177!1.01e-10!29;UBERON:0005057!5.03e-10!51;UBERON:0001041!1.18e-09!92;UBERON:0000077!1.38e-08!97;UBERON:0001004!8.43e-08!42;UBERON:0003408!9.36e-08!24;UBERON:0003081!3.28e-07!88;UBERON:0000065!3.73e-07!41;UBERON:0001007!3.85e-07!128;UBERON:0001555!3.85e-07!128;UBERON:0007026!3.85e-07!128;UBERON:0002370!5.39e-07!23;UBERON:0000974!5.39e-07!23;UBERON:0004807!5.39e-07!23;UBERON:0005058!5.39e-07!23;UBERON:0003351!5.39e-07!23;UBERON:0009113!5.39e-07!23;UBERON:0003295!5.39e-07!23;UBERON:0009722!5.39e-07!23;UBERON:0005562!5.39e-07!23;UBERON:0007690!5.39e-07!23;UBERON:0004119!7.53e-07!130;UBERON:0000925!7.53e-07!130;UBERON:0006595!7.53e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.54e-21,48;UBERON:0002405,2.54e-21,48;UBERON:0002390,7.54e-17,45;UBERON:0003061,7.54e-17,45;UBERON:0002106,8.95e-14,6;UBERON:0004457,8.95e-14,6;UBERON:0000042,8.95e-14,6;UBERON:0004854,8.95e-14,6;UBERON:0009034,8.95e-14,6;UBERON:0002095,8.95e-14,6;UBERON:0004782,8.95e-14,6;UBERON:0003281,8.95e-14,6;UBERON:0009664,8.95e-14,6;UBERON:0002296,8.95e-14,6;UBERON:0005602,8.95e-14,6;UBERON:0001179,8.95e-14,6;UBERON:0006293,8.95e-14,6;UBERON:0003887,2.08e-12,10;UBERON:0004177,5.94e-10,29;UBERON:0005057,5.94e-10,29;UBERON:0003081,3.85e-09,87;UBERON:0000077,4.42e-08,35;UBERON:0002371,7.63e-08,16;UBERON:0002465,1.13e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.66554880907831,1.21485160433896,0.699561878128147,4.41647031501533,7.67840828192137,3.39511721438424,0.0850432901510698,0,0,1.11994695955385,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,26.1527262483643,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,3.2465467351592,0,0.185194527369712,1.50694765603753,4.37421528707281,2.28778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,1.68897069871134,1.07416017400489,0.79472541912506,0.600977247599844,0.590758108698309,0.706765149637033,1.06689529317,0.504130925684203,0.584747284438515,0.384847366561318,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p3@uc007pvs.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=160bp_to_uc007pvs.1_5end | |||
|description=CAGE_peak_3_at_uc007pvs.1_5end | |||
|id=chr13:24506667..24506683,- | |||
|ontology_enrichment_celltype=CL:0000553!1.07e-08!6;CL:0000556!1.07e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.83e-21,6;CL:0000556,3.83e-21,6;CL:0000050,4.55e-14,9;CL:0000839,1.07e-09,13;CL:0000763,7.63e-08,16;CL:0002027,2.23e-07,3;CL:0002006,2.23e-07,3;CL:0002024,2.23e-07,3;CL:0002031,6.76e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.12e-14!48;UBERON:0002405!1.00e-13!70;UBERON:0002390!2.93e-11!45;UBERON:0003061!2.93e-11!45;UBERON:0004177!1.01e-10!29;UBERON:0005057!5.03e-10!51;UBERON:0001041!1.18e-09!92;UBERON:0000077!1.38e-08!97;UBERON:0001004!8.43e-08!42;UBERON:0003408!9.36e-08!24;UBERON:0003081!3.28e-07!88;UBERON:0000065!3.73e-07!41;UBERON:0001007!3.85e-07!128;UBERON:0001555!3.85e-07!128;UBERON:0007026!3.85e-07!128;UBERON:0002370!5.39e-07!23;UBERON:0000974!5.39e-07!23;UBERON:0004807!5.39e-07!23;UBERON:0005058!5.39e-07!23;UBERON:0003351!5.39e-07!23;UBERON:0009113!5.39e-07!23;UBERON:0003295!5.39e-07!23;UBERON:0009722!5.39e-07!23;UBERON:0005562!5.39e-07!23;UBERON:0007690!5.39e-07!23;UBERON:0004119!7.53e-07!130;UBERON:0000925!7.53e-07!130;UBERON:0006595!7.53e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.54e-21,48;UBERON:0002405,2.54e-21,48;UBERON:0002390,7.54e-17,45;UBERON:0003061,7.54e-17,45;UBERON:0002106,8.95e-14,6;UBERON:0004457,8.95e-14,6;UBERON:0000042,8.95e-14,6;UBERON:0004854,8.95e-14,6;UBERON:0009034,8.95e-14,6;UBERON:0002095,8.95e-14,6;UBERON:0004782,8.95e-14,6;UBERON:0003281,8.95e-14,6;UBERON:0009664,8.95e-14,6;UBERON:0002296,8.95e-14,6;UBERON:0005602,8.95e-14,6;UBERON:0001179,8.95e-14,6;UBERON:0006293,8.95e-14,6;UBERON:0003887,2.08e-12,10;UBERON:0004177,5.94e-10,29;UBERON:0005057,5.94e-10,29;UBERON:0003081,3.85e-09,87;UBERON:0000077,4.42e-08,35;UBERON:0002371,7.63e-08,16;UBERON:0002465,1.13e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,1.66554880907831,1.21485160433896,0.699561878128147,4.41647031501533,7.67840828192137,3.39511721438424,0.0850432901510698,0,0,1.11994695955385,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,26.1527262483643,0,0,0,0,0,0,0,0,0.289198713839823,0.884610551949874,0,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,0.655453258862952,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,3.2465467351592,0,0.185194527369712,1.50694765603753,4.37421528707281,2.28778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,1.68897069871134,1.07416017400489,0.79472541912506,0.600977247599844,0.590758108698309,0.706765149637033,1.06689529317,0.504130925684203,0.584747284438515,0.384847366561318,1.8700304349051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p3@uc007pvs.1 | |||
}} |
Revision as of 00:12, 13 September 2013
Short description: | p3@uc007pvs.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc007pvs.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | 160bp_to_uc007pvs.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.83e-21 | 6 |
megakaryocyte | 3.83e-21 | 6 |
megakaryocyte-erythroid progenitor cell | 4.55e-14 | 9 |
myeloid lineage restricted progenitor cell | 1.07e-09 | 13 |
myeloid cell | 7.63e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 2.23e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.23e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.23e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 6.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.54e-21 | 48 |
immune system | 2.54e-21 | 48 |
hematopoietic system | 7.54e-17 | 45 |
blood island | 7.54e-17 | 45 |
spleen | 8.95e-14 | 6 |
cavity lining | 8.95e-14 | 6 |
serous membrane | 8.95e-14 | 6 |
gastrointestinal system mesentery | 8.95e-14 | 6 |
stomach region | 8.95e-14 | 6 |
mesentery | 8.95e-14 | 6 |
gastrointestinal system serosa | 8.95e-14 | 6 |
mesentery of stomach | 8.95e-14 | 6 |
gut mesentery | 8.95e-14 | 6 |
dorsal mesentery | 8.95e-14 | 6 |
dorsal mesogastrium | 8.95e-14 | 6 |
peritoneal cavity | 8.95e-14 | 6 |
spleen primordium | 8.95e-14 | 6 |
intraembryonic coelom | 2.08e-12 | 10 |
hemopoietic organ | 5.94e-10 | 29 |
immune organ | 5.94e-10 | 29 |
lateral plate mesoderm | 3.85e-09 | 87 |
mixed endoderm/mesoderm-derived structure | 4.42e-08 | 35 |
bone marrow | 7.63e-08 | 16 |
lymphoid system | 1.13e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.