FFCP PHASE1:Mm9::chr14:80421967..80421987,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:80421967..80421987,+|id=chr14:80421967..80421987,+|ontology_enrichment_celltype=CL:0002563!1.07e-10!9;CL:0002251!1.07e-10!9;CL:0002076!2.12e-10!15;CL:0002250!1.50e-09!3;CL:0000223!1.90e-07!20;CL:0000066!4.30e-07!25|ontology_enrichment_celltype_v019_2=CL:0002250,1.46e-25,3;CL:0002563,6.35e-15,9;CL:0002251,6.35e-15,9;CL:0002076,4.47e-09,15;CL:0000223,7.27e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.67e-17!15;UBERON:0005409!2.48e-14!59;UBERON:0000160!8.70e-14!43;UBERON:0001242!1.38e-12!13;UBERON:0000060!1.38e-12!13;UBERON:0001262!1.38e-12!13;UBERON:0004786!1.38e-12!13;UBERON:0004923!9.83e-12!24;UBERON:0003350!1.07e-10!9;UBERON:0004808!1.07e-10!9;UBERON:0001277!1.07e-10!9;UBERON:0000485!1.31e-08!11;UBERON:0001007!6.83e-08!128;UBERON:0001555!6.83e-08!128;UBERON:0007026!6.83e-08!128;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.22e-34,15;UBERON:0001242,3.91e-22,13;UBERON:0001262,3.91e-22,13;UBERON:0004786,3.91e-22,13;UBERON:0004923,5.64e-21,24;UBERON:0001962,4.76e-17,2;UBERON:0001961,4.76e-17,2;UBERON:0001744,4.76e-17,2;UBERON:0003350,6.35e-15,9;UBERON:0004808,6.35e-15,9;UBERON:0001277,6.35e-15,9;UBERON:0000485,2.85e-12,11;UBERON:0002465,1.07e-11,3;UBERON:0000331,2.51e-11,3;UBERON:0002116,2.51e-11,3;UBERON:0001204,2.51e-11,3;UBERON:0001168,2.51e-11,3;UBERON:0003199,2.09e-09,1;UBERON:0000160,3.34e-09,31;UBERON:0002108,1.00e-08,4|phase1_expression=0,0,0,0,0.500895729946347,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,0,0,0.215471232685889,1.71021077510736,1.00812051903972,0,0,0,0,8.37669697278696,10.805251948302,7.55426618170766,0.837063261473815,0,4.18818995179039,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:80421967..80421987,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:80421967..80421987,+ | |||
|id=chr14:80421967..80421987,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.07e-10!9;CL:0002251!1.07e-10!9;CL:0002076!2.12e-10!15;CL:0002250!1.50e-09!3;CL:0000223!1.90e-07!20;CL:0000066!4.30e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.46e-25,3;CL:0002563,6.35e-15,9;CL:0002251,6.35e-15,9;CL:0002076,4.47e-09,15;CL:0000223,7.27e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.67e-17!15;UBERON:0005409!2.48e-14!59;UBERON:0000160!8.70e-14!43;UBERON:0001242!1.38e-12!13;UBERON:0000060!1.38e-12!13;UBERON:0001262!1.38e-12!13;UBERON:0004786!1.38e-12!13;UBERON:0004923!9.83e-12!24;UBERON:0003350!1.07e-10!9;UBERON:0004808!1.07e-10!9;UBERON:0001277!1.07e-10!9;UBERON:0000485!1.31e-08!11;UBERON:0001007!6.83e-08!128;UBERON:0001555!6.83e-08!128;UBERON:0007026!6.83e-08!128;UBERON:0004119!1.11e-07!130;UBERON:0000925!1.11e-07!130;UBERON:0006595!1.11e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.22e-34,15;UBERON:0001242,3.91e-22,13;UBERON:0001262,3.91e-22,13;UBERON:0004786,3.91e-22,13;UBERON:0004923,5.64e-21,24;UBERON:0001962,4.76e-17,2;UBERON:0001961,4.76e-17,2;UBERON:0001744,4.76e-17,2;UBERON:0003350,6.35e-15,9;UBERON:0004808,6.35e-15,9;UBERON:0001277,6.35e-15,9;UBERON:0000485,2.85e-12,11;UBERON:0002465,1.07e-11,3;UBERON:0000331,2.51e-11,3;UBERON:0002116,2.51e-11,3;UBERON:0001204,2.51e-11,3;UBERON:0001168,2.51e-11,3;UBERON:0003199,2.09e-09,1;UBERON:0000160,3.34e-09,31;UBERON:0002108,1.00e-08,4 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.33575854382378,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,2.52350209173887,0,0,0.215471232685889,1.71021077510736,1.00812051903972,0,0,0,0,8.37669697278696,10.805251948302,7.55426618170766,0.837063261473815,0,4.18818995179039,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80421967..80421987,+ | |||
}} |
Revision as of 03:12, 13 September 2013
Short description: | p@chr14:80421967..80421987, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:80421967..80421987, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.46e-25 | 3 |
intestinal epithelial cell | 6.35e-15 | 9 |
epithelial cell of alimentary canal | 6.35e-15 | 9 |
endo-epithelial cell | 4.47e-09 | 15 |
endodermal cell | 7.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.22e-34 | 15 |
intestinal mucosa | 3.91e-22 | 13 |
wall of intestine | 3.91e-22 | 13 |
gastrointestinal system mucosa | 3.91e-22 | 13 |
organ component layer | 5.64e-21 | 24 |
gut-associated lymphoid tissue | 4.76e-17 | 2 |
mucosa-associated lymphoid tissue | 4.76e-17 | 2 |
lymphoid tissue | 4.76e-17 | 2 |
epithelium of mucosa | 6.35e-15 | 9 |
gastrointestinal system epithelium | 6.35e-15 | 9 |
intestinal epithelium | 6.35e-15 | 9 |
simple columnar epithelium | 2.85e-12 | 11 |
lymphoid system | 1.07e-11 | 3 |
ileal mucosa | 2.51e-11 | 3 |
ileum | 2.51e-11 | 3 |
mucosa of small intestine | 2.51e-11 | 3 |
wall of small intestine | 2.51e-11 | 3 |
egg chamber | 2.09e-09 | 1 |
intestine | 3.34e-09 | 31 |
small intestine | 1.00e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.