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FFCP PHASE1:Mm9::chr7:87331721..87331790,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20352|HGNC=|MCL_coexpression_id=24|UniProt=Q62179,F2Z3W4|association_with_transcript=0bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end|description=CAGE_peak_1_at_Sema4b_5end|id=chr7:87331721..87331790,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.08e-14!59;UBERON:0000160!5.27e-13!43;UBERON:0000344!4.77e-10!15;UBERON:0000480!4.27e-09!308;UBERON:0000467!4.27e-09!308;UBERON:0001242!8.03e-09!13;UBERON:0000060!8.03e-09!13;UBERON:0001262!8.03e-09!13;UBERON:0004786!8.03e-09!13;UBERON:0002050!1.17e-07!317;UBERON:0005423!1.17e-07!317;UBERON:0000923!1.43e-07!314;UBERON:0005291!1.43e-07!314;UBERON:0006598!1.43e-07!314;UBERON:0002532!1.43e-07!314;UBERON:0004923!2.52e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.77e-13,47;UBERON:0000160,3.55e-13,31;UBERON:0000344,4.71e-10,15;UBERON:0001242,7.94e-09,13;UBERON:0001262,7.94e-09,13;UBERON:0004786,7.94e-09,13;UBERON:0004923,2.50e-07,24|phase1_expression=4.16387002472464,158.43483506827,157.429736828779,130.664539284551,151.270510443797,32.4006994789947,40.1813741824304,0.774739940649458,0,0,0,0,0,0,6.66219523631325,9.31386229993199,11.8925519281785,0.473193248037357,0.274228867211478,0.84877930359606,11.3107575900923,0,0,48.3177116836088,45.4230376512997,106.807145325394,75.8141113239972,60.7628876174207,70.3086651988583,55.1945984174248,43.2374495777844,10.1604907753541,15.9916844771988,15.8481681015439,21.9527231010969,18.4520456347927,20.2127662699745,0,0,0,0,0,0,3.39921408534059,4.66333883609767,6.9747765821439,6.25913075478431,25.0728929837513,25.4835971971987,21.1928589990969,17.778275546421,20.125359011096,0,0,0,2.31533492432352,2.86533439938757,6.70373719960675,4.65327859977075,5.81890077199236,6.33831403506179,11.1818695582814,11.5608323494448,2.6996991518442,1.97773272513395,2.8419204597844,11.6844043102178,20.3635701820424,11.4058573539325,8.10035629990144,9.25429829946081,8.85518051651791,8.83474163806454,7.22695715368229,7.57179221044067,1.83843757322004,5.50579404996943,6.38436690425939,5.22262213071228,6.4624280987795,8.05091263701205,7.29278718779464,3.35019598801657,10.1297269805702,7.94550888439413,7.07108605136802,8.25755748634797,5.96478226640962,14.1607981533054,17.3814588245607,20.2905142091174,10.3250865237766,1.3599426674155,4.31762553310254,3.89865850468601,5.82434953226536,7.72444310724635,0.511290967734173,1.03914401841148,0.70667914902068,8.59144860637751,0,0,0,14.5048997477513,13.9347926011304,10.6160133453104,18.2694207550496,2.33044095282455,31.7666177598725,7.45986905094384,13.7009465240464,19.3717017695089,21.7040602395776,22.5770317700553,24.6306519006164,18.0452326446093,7.22996784599558,5.30766331169925,0.808834249737046,4.63767188766826,4.363877278217,42.8701050801681,3.22058876712702,5.65506108396329,60.7987791396448,0,0,0,5.84183493678809,5.49000723382352,6.15706325353036,5.9100268865374,8.95004100656157,4.98691306942944,7.78758062725237,9.57290020192973,7.96204611904595,19.2069296409593,44.824115303819,5.85541993332167,8.27647575960503,5.04173963454978,4.21973489940002,8.16437989815934,6.91814089538189,7.87094486301722,24.0594134787285,1.29340795759705,1.51284864134255,2.99116911078713,1.53437012699302,2.78047249225598,7.66154766348766,9.87754254758129,6.56813080501028,0,0,0.284163499395593,5.59239585845855,5.8631514995274,5.58192390529146,8.99629995223799,11.0187969778546,11.2614992407786,8.8362899005155,15.0233104783787,14.2453717687947,14.4812667923863,10.1783827729039,11.6739085746032,14.1813987802572,11.6361561104257,8.85762363818454,8.41159794256509,7.10041825417063,147.366777210774,45.7499480327932,6.39864751605702,4.41249676534833,6.57224052742676,7.66397393568702,8.45036566610507,14.2669219584419,51.2491386468073,27.1753275294618,25.3848560888272,24.4716460610616,31.1942539390592,45.8397898413653,34.1498118802017,41.6205261101627,6.82804443431094,6.39791670614481,9.01661885384643,11.6081256871829,12.9948166402309,15.2896087360894,16.8209188750524,19.3369293853279,18.5258498852822,23.5688583090639,5.03969466048153,3.17005700860579,2.94838492669805,2.9232074610031,3.65148218499305,5.30589751455317,5.0925170356284,8.34318798607351,5.35046248357617,5.76578967694971,5.75072826109418,10.0478055870496,4.68056509671841,6.81962970457202,6.99649912735457,8.20153986317724,7.02062122633098,3.22135400009824,2.11854469374634,3.73439188705414,7.04070744865506,9.71536293162531,9.99783291721258,8.39074685788535,6.14777062014145,4.87222317227305,4.46473352240964,4.7520361267564,4.31712454664739,6.65385669474953,3.01582567878545,3.26343410291226,15.2446924635901,20.1433824802455,5.45872005958493,6.44664276257117,0.163934945376675,2.7771801992481,3.15508219416257,7.02789739733949,10.3403230911743,9.55875191810208,10.9171350300373,12.1722908239198,7.69140333182299,7.3063964477828,10.6727700045561,12.8528526568723,24.1298144854057,8.90328018336276,10.750539317336,20.4562952485944,7.96470830039777,8.74010290157933,14.2092071773433,8.11001842950362,15.651000322681,11.0676653259814,16.7978390559344,11.9966130727577,6.06045543254026,9.48110273807448,5.27093042874994,18.5643977846736,37.4483566329167,8.46287141947158,14.3588138998857,15.8609405923378,13.3005175231705,21.5826269298505,17.2776471632227,39.2759784357833,6.33613611772018,23.513359865884,18.9654422327267,27.5360042412272,9.52640117505843,11.4594557363496,13.2503301843481,19.5327670696623,47.5113763706657,3.52308073819968,6.66396435111626,6.81076664278634,3.51869602002452,6.78126445216888,8.61173634642459,5.94823250336959,0.169978429993855,0,0,18.1387417422872,8.06656783631895,10.9792512248498,10.3685127188929,10.8725913927524,18.9975430459175,19.6901945721838,23.8868487046221,30.8872011541155,43.809860972626,42.8724126029979,1.69107881605257,10.9147078612105,10.5893433892542,11.2781689239548,12.5285028773399,12.3337971608268,14.2002258761362,20.5722928053441,18.9795413410537,10.8712854371703,9.79302021276743,2.52808896502543,6.68993210457542,7.60061083019722,4.80707045017842,3.75956060901711,3.57626438606277,2.76449533895928,3.39685912501528,2.1202954489111,2.81965184623499,3.62974266492626,3.99577311032985,1.73181314952593,2.80504565235765,26.3007244993645,10.211353855207,5.20340368334959,6.54750003819906,24.1486992540238,18.9559300205694,16.4836461840539,40.5156236459434,20.0628841614145,6.7770221114048,5.06357760157895,5.72895513439397,4.46818274093588,2.05524755931193,3.0215755895588,1.35004500046361,5.40385443869065,4.53142408984205,7.24864436452548,0.726511433089237,5.1873233542134,3.07320490357441,6.32077464377565,2.09613162627982,0.919217542250071,3.77819437262746,5.15087643097235,5.77654577265267,4.80124702351215,6.08350319736575,5.28153755881013,5.3375659257833,5.50616310681876,6.66251439885114,7.1444053692461,6.14186927507734,6.75182271622968,7.82963211526283,5.15196220470391,4.80016953339582,7.0990322463735,8.82213902805088,5.37781741539616,4.98779716201252,6.76916863133412,4.024415403201,4.73525480588117,5.02475221229689,5.61142271657738,7.11810108745045,7.19082721341613,6.95692773388472,6.66228417099654,4.82266527452853,6.74488560432454,7.48581147025307,6.66100267549725,3.25190164517034,3.97064554415128,3.2461496986859|short_description=p1@Sema4b}}
|EntrezGene=20352
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q62179,F2Z3W4
|association_with_transcript=0bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end
|description=CAGE_peak_1_at_Sema4b_5end
|id=chr7:87331721..87331790,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!6.08e-14!59;UBERON:0000160!5.27e-13!43;UBERON:0000344!4.77e-10!15;UBERON:0000480!4.27e-09!308;UBERON:0000467!4.27e-09!308;UBERON:0001242!8.03e-09!13;UBERON:0000060!8.03e-09!13;UBERON:0001262!8.03e-09!13;UBERON:0004786!8.03e-09!13;UBERON:0002050!1.17e-07!317;UBERON:0005423!1.17e-07!317;UBERON:0000923!1.43e-07!314;UBERON:0005291!1.43e-07!314;UBERON:0006598!1.43e-07!314;UBERON:0002532!1.43e-07!314;UBERON:0004923!2.52e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.77e-13,47;UBERON:0000160,3.55e-13,31;UBERON:0000344,4.71e-10,15;UBERON:0001242,7.94e-09,13;UBERON:0001262,7.94e-09,13;UBERON:0004786,7.94e-09,13;UBERON:0004923,2.50e-07,24
|phase1_expression=4.16387002472464,158.43483506827,157.429736828779,130.664539284551,151.270510443797,32.4006994789947,40.1813741824304,0.774739940649458,0,0,0,0,0,0,6.66219523631325,9.31386229993199,11.8925519281785,0.473193248037357,0.274228867211478,0.84877930359606,11.3107575900923,0,0,48.3177116836088,45.4230376512997,106.807145325394,75.8141113239972,60.7628876174207,70.3086651988583,55.1945984174248,43.2374495777844,10.1604907753541,15.9916844771988,15.8481681015439,21.9527231010969,18.4520456347927,20.2127662699745,0,0,0,0,0,0,3.39921408534059,4.66333883609767,6.9747765821439,6.25913075478431,25.0728929837513,25.4835971971987,21.1928589990969,17.778275546421,20.125359011096,0,0,0,2.31533492432352,2.86533439938757,6.70373719960675,4.65327859977075,5.81890077199236,6.33831403506179,11.1818695582814,11.5608323494448,2.6996991518442,1.97773272513395,2.8419204597844,11.6844043102178,20.3635701820424,11.4058573539325,8.10035629990144,9.25429829946081,8.85518051651791,8.83474163806454,7.22695715368229,7.57179221044067,1.83843757322004,5.50579404996943,6.38436690425939,5.22262213071228,6.4624280987795,8.05091263701205,7.29278718779464,3.35019598801657,10.1297269805702,7.94550888439413,7.07108605136802,8.25755748634797,5.96478226640962,14.1607981533054,17.3814588245607,20.2905142091174,10.3250865237766,1.3599426674155,4.31762553310254,3.89865850468601,5.82434953226536,7.72444310724635,0.511290967734173,1.03914401841148,0.70667914902068,8.59144860637751,0,0,0,14.5048997477513,13.9347926011304,10.6160133453104,18.2694207550496,2.33044095282455,31.7666177598725,7.45986905094384,13.7009465240464,19.3717017695089,21.7040602395776,22.5770317700553,24.6306519006164,18.0452326446093,7.22996784599558,5.30766331169925,0.808834249737046,4.63767188766826,4.363877278217,42.8701050801681,3.22058876712702,5.65506108396329,60.7987791396448,0,0,0,5.84183493678809,5.49000723382352,6.15706325353036,5.9100268865374,8.95004100656157,4.98691306942944,7.78758062725237,9.57290020192973,7.96204611904595,19.2069296409593,44.824115303819,5.85541993332167,8.27647575960503,5.04173963454978,4.21973489940002,8.16437989815934,6.91814089538189,7.87094486301722,24.0594134787285,1.29340795759705,1.51284864134255,2.99116911078713,1.53437012699302,2.78047249225598,7.66154766348766,9.87754254758129,6.56813080501028,0,0,0.284163499395593,5.59239585845855,5.8631514995274,5.58192390529146,8.99629995223799,11.0187969778546,11.2614992407786,8.8362899005155,15.0233104783787,14.2453717687947,14.4812667923863,10.1783827729039,11.6739085746032,14.1813987802572,11.6361561104257,8.85762363818454,8.41159794256509,7.10041825417063,147.366777210774,45.7499480327932,6.39864751605702,4.41249676534833,6.57224052742676,7.66397393568702,8.45036566610507,14.2669219584419,51.2491386468073,27.1753275294618,25.3848560888272,24.4716460610616,31.1942539390592,45.8397898413653,34.1498118802017,41.6205261101627,6.82804443431094,6.39791670614481,9.01661885384643,11.6081256871829,12.9948166402309,15.2896087360894,16.8209188750524,19.3369293853279,18.5258498852822,23.5688583090639,5.03969466048153,3.17005700860579,2.94838492669805,2.9232074610031,3.65148218499305,5.30589751455317,5.0925170356284,8.34318798607351,5.35046248357617,5.76578967694971,5.75072826109418,10.0478055870496,4.68056509671841,6.81962970457202,6.99649912735457,8.20153986317724,7.02062122633098,3.22135400009824,2.11854469374634,3.73439188705414,7.04070744865506,9.71536293162531,9.99783291721258,8.39074685788535,6.14777062014145,4.87222317227305,4.46473352240964,4.7520361267564,4.31712454664739,6.65385669474953,3.01582567878545,3.26343410291226,15.2446924635901,20.1433824802455,5.45872005958493,6.44664276257117,0.163934945376675,2.7771801992481,3.15508219416257,7.02789739733949,10.3403230911743,9.55875191810208,10.9171350300373,12.1722908239198,7.69140333182299,7.3063964477828,10.6727700045561,12.8528526568723,24.1298144854057,8.90328018336276,10.750539317336,20.4562952485944,7.96470830039777,8.74010290157933,14.2092071773433,8.11001842950362,15.651000322681,11.0676653259814,16.7978390559344,11.9966130727577,6.06045543254026,9.48110273807448,5.27093042874994,18.5643977846736,37.4483566329167,8.46287141947158,14.3588138998857,15.8609405923378,13.3005175231705,21.5826269298505,17.2776471632227,39.2759784357833,6.33613611772018,23.513359865884,18.9654422327267,27.5360042412272,9.52640117505843,11.4594557363496,13.2503301843481,19.5327670696623,47.5113763706657,3.52308073819968,6.66396435111626,6.81076664278634,3.51869602002452,6.78126445216888,8.61173634642459,5.94823250336959,0.169978429993855,0,0,18.1387417422872,8.06656783631895,10.9792512248498,10.3685127188929,10.8725913927524,18.9975430459175,19.6901945721838,23.8868487046221,30.8872011541155,43.809860972626,42.8724126029979,1.69107881605257,10.9147078612105,10.5893433892542,11.2781689239548,12.5285028773399,12.3337971608268,14.2002258761362,20.5722928053441,18.9795413410537,10.8712854371703,9.79302021276743,2.52808896502543,6.68993210457542,7.60061083019722,4.80707045017842,3.75956060901711,3.57626438606277,2.76449533895928,3.39685912501528,2.1202954489111,2.81965184623499,3.62974266492626,3.99577311032985,1.73181314952593,2.80504565235765,26.3007244993645,10.211353855207,5.20340368334959,6.54750003819906,24.1486992540238,18.9559300205694,16.4836461840539,40.5156236459434,20.0628841614145,6.7770221114048,5.06357760157895,5.72895513439397,4.46818274093588,2.05524755931193,3.0215755895588,1.35004500046361,5.40385443869065,4.53142408984205,7.24864436452548,0.726511433089237,5.1873233542134,3.07320490357441,6.32077464377565,2.09613162627982,0.919217542250071,3.77819437262746,5.15087643097235,5.77654577265267,4.80124702351215,6.08350319736575,5.28153755881013,5.3375659257833,5.50616310681876,6.66251439885114,7.1444053692461,6.14186927507734,6.75182271622968,7.82963211526283,5.15196220470391,4.80016953339582,7.0990322463735,8.82213902805088,5.37781741539616,4.98779716201252,6.76916863133412,4.024415403201,4.73525480588117,5.02475221229689,5.61142271657738,7.11810108745045,7.19082721341613,6.95692773388472,6.66228417099654,4.82266527452853,6.74488560432454,7.48581147025307,6.66100267549725,3.25190164517034,3.97064554415128,3.2461496986859
|short_description=p1@Sema4b
}}

Revision as of 14:18, 14 September 2013

Short description:p1@Sema4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sema4b_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000032754, ENSMUST00000107383, NM_013659, uc009hzo.1, uc009hzp.1_5end
EntrezGene:Sema4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sema4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5158.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6157.43
CD326+ enterocyte, pool1.CNhs13542.11848-124I3130.66
CD326+ enterocyte, pool2.CNhs13197.11849-124I4151.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I840.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D148.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D245.42
GP2+ M cell, pool1.CNhs13228.11845-124H9106.81
GP2+ M cell, pool2.CNhs13231.11846-124I175.81
GP2+ M cell, pool3.CNhs13240.11847-124I260.76
Ileum epithelium, pool1.CNhs13199.10252-104B970.31
Ileum epithelium, pool2.CNhs13232.10253-104C155.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D914.16
Mouse Schwann, donor2.CNhs12573.11746-123F917.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.50
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.27
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D731.77
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I119.37
adrenal gland, embryo E18.CNhs11026.1262-18F521.70
adrenal gland, neonate N00.CNhs11191.1311-23C122.58
adrenal gland, neonate N25.CNhs11223.1377-27I324.63
amnion, adult pregnant day17.5.CNhs10488.583-22A818.05
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H760.80
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.96
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G444.82
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G87.87
eyeball, neonate N16.CNhs11188.777-19A224.06
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B59.88
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C611.26
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G315.02
heart, neonate N00.CNhs11213.639-21E314.25
heart, neonate N03.CNhs11221.1349-25I214.48
heart, neonate N10.CNhs11118.749-24G110.18
heart, neonate N16.CNhs11209.782-15G111.67
heart, neonate N20.CNhs11127.821-26I614.18
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D28.86
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I3147.37
intestine, adult.CNhs10496.178-9A345.75
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F714.27
intestine, neonate N00.CNhs11126.644-26D151.25
intestine, neonate N01.CNhs11192.1322-23E927.18
intestine, neonate N06.CNhs11102.688-20B825.38
intestine, neonate N07.CNhs11095.720-20F224.47
intestine, neonate N10.CNhs11098.755-23A531.19
intestine, neonate N20.CNhs11187.827-18D145.84
intestine, neonate N25.CNhs11121.1352-25E334.15
intestine, neonate N30.CNhs11131.1384-42G141.62
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C712.99
kidney, neonate N00.CNhs11214.646-21G715.29
kidney, neonate N10.CNhs11206.758-6D516.82
kidney, neonate N20.CNhs11113.832-19I119.34
kidney, neonate N25.CNhs11122.1353-25F318.53
kidney, neonate N30.CNhs11203.1385-42H123.57
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H220.14
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.17
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I724.13
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G620.46
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G837.45
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C714.36
pituitary gland, embryo E14.CNhs11037.398-44A515.86
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F621.58
pituitary gland, embryo E17.CNhs11039.1265-44F517.28
pituitary gland, neonate N00.CNhs11190.1308-22E939.28
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G323.51
prostate, adult.CNhs10470.859-1F818.97
skin, adult.CNhs10492.30-1C327.54
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H311.46
skin, neonate N06.CNhs11097.693-20I513.25
skin, neonate N10.CNhs11108.762-6C419.53
small intestine, neonate N16.CNhs11114.790-21I147.51
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D410.37
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B819.69
stomach, neonate N07.CNhs11210.718-18A923.89
stomach, neonate N25.CNhs11104.1355-25E430.89
stomach, neonate N30.CNhs11134.1386-42I143.81
submandibular gland, adult.CNhs10469.59-29C142.87
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F510.91
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I512.53
testis, embryo E18.CNhs11027.503-18G512.33
testis, neonate N00.CNhs11189.1300-22B714.20
testis, neonate N07.CNhs11222.726-26I420.57
testis, neonate N10.CNhs11204.763-44D918.98
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I27.60
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B426.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.55
urinary bladder, adult.CNhs10481.879-12E424.15
uterus, adult pregnant day19.CNhs10497.590-15F518.96
uterus, adult.CNhs10509.92-27E516.48
vagina, adult.CNhs10502.89-27D540.52
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.25





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.77e-1347
intestine3.55e-1331
mucosa4.71e-1015
intestinal mucosa7.94e-0913
wall of intestine7.94e-0913
gastrointestinal system mucosa7.94e-0913
organ component layer2.50e-0724







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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