FFCP PHASE1:Mm9::chr7:86971794..86971813,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:86971794..86971813,-|id=chr7:86971794..86971813,-|ontology_enrichment_celltype=CL:0000239!6.47e-07!6;CL:0000677!6.47e-07!6;CL:0000212!6.47e-07!6;CL:0000584!6.47e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,8.91e-11,3;CL:0000239,1.19e-08,6;CL:0000677,1.19e-08,6;CL:0000584,1.19e-08,6;CL:0000473,1.24e-07,7;CL:0000075,2.00e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.85e-21!43;UBERON:0005409!2.73e-16!59;UBERON:0000344!4.25e-10!15;UBERON:0001007!4.99e-09!128;UBERON:0001555!4.99e-09!128;UBERON:0007026!4.99e-09!128;UBERON:0004119!1.13e-08!130;UBERON:0000925!1.13e-08!130;UBERON:0006595!1.13e-08!130;UBERON:0001242!4.74e-08!13;UBERON:0000060!4.74e-08!13;UBERON:0001262!4.74e-08!13;UBERON:0004786!4.74e-08!13;UBERON:0004921!6.48e-08!126;UBERON:0004185!6.48e-08!126;UBERON:0002108!4.51e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-30,31;UBERON:0005409,5.26e-19,47;UBERON:0000344,1.39e-16,15;UBERON:0002108,2.23e-14,4;UBERON:0001242,9.67e-12,13;UBERON:0001262,9.67e-12,13;UBERON:0004786,9.67e-12,13;UBERON:0000331,2.63e-11,3;UBERON:0002116,2.63e-11,3;UBERON:0001204,2.63e-11,3;UBERON:0001168,2.63e-11,3;UBERON:0004923,8.67e-10,24;UBERON:0001962,1.25e-07,2;UBERON:0001961,1.25e-07,2;UBERON:0001744,1.25e-07,2;UBERON:0001007,2.40e-07,116;UBERON:0001555,2.40e-07,116;UBERON:0007026,2.40e-07,116;UBERON:0004119,3.74e-07,118;UBERON:0000925,3.74e-07,118;UBERON:0006595,3.74e-07,118|phase1_expression=0,5.93258192986914,2.72999543633722,1.20985684522732,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.71987118748791,4.35877634027623,4.01962374880514,3.87685796543167,3.01659725760245,10.2612646506442,4.78857246543868,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,3.5524005747305,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,0.646703978798527,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.667134131534611,1.14135375667535,4.74529061544512,3.29397909448022,1.50801125280162,0.397912944082302,1.16978452271472,1.79763881730844,4.75503709724327,3.38540164532424,0,0,0,0.610953983535943,0.581857461502877,0.420814919341911,0.0632365371242573,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p@chr7:86971794..86971813,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:86971794..86971813,- | |||
|id=chr7:86971794..86971813,- | |||
|ontology_enrichment_celltype=CL:0000239!6.47e-07!6;CL:0000677!6.47e-07!6;CL:0000212!6.47e-07!6;CL:0000584!6.47e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.91e-11,3;CL:0000239,1.19e-08,6;CL:0000677,1.19e-08,6;CL:0000584,1.19e-08,6;CL:0000473,1.24e-07,7;CL:0000075,2.00e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.85e-21!43;UBERON:0005409!2.73e-16!59;UBERON:0000344!4.25e-10!15;UBERON:0001007!4.99e-09!128;UBERON:0001555!4.99e-09!128;UBERON:0007026!4.99e-09!128;UBERON:0004119!1.13e-08!130;UBERON:0000925!1.13e-08!130;UBERON:0006595!1.13e-08!130;UBERON:0001242!4.74e-08!13;UBERON:0000060!4.74e-08!13;UBERON:0001262!4.74e-08!13;UBERON:0004786!4.74e-08!13;UBERON:0004921!6.48e-08!126;UBERON:0004185!6.48e-08!126;UBERON:0002108!4.51e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-30,31;UBERON:0005409,5.26e-19,47;UBERON:0000344,1.39e-16,15;UBERON:0002108,2.23e-14,4;UBERON:0001242,9.67e-12,13;UBERON:0001262,9.67e-12,13;UBERON:0004786,9.67e-12,13;UBERON:0000331,2.63e-11,3;UBERON:0002116,2.63e-11,3;UBERON:0001204,2.63e-11,3;UBERON:0001168,2.63e-11,3;UBERON:0004923,8.67e-10,24;UBERON:0001962,1.25e-07,2;UBERON:0001961,1.25e-07,2;UBERON:0001744,1.25e-07,2;UBERON:0001007,2.40e-07,116;UBERON:0001555,2.40e-07,116;UBERON:0007026,2.40e-07,116;UBERON:0004119,3.74e-07,118;UBERON:0000925,3.74e-07,118;UBERON:0006595,3.74e-07,118 | |||
|phase1_expression=0,5.93258192986914,2.72999543633722,1.20985684522732,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,2.71987118748791,4.35877634027623,4.01962374880514,3.87685796543167,3.01659725760245,10.2612646506442,4.78857246543868,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,3.5524005747305,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,0.646703978798527,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.85115396664481,0,0,0.128867461322093,0.201683524623343,0.667134131534611,1.14135375667535,4.74529061544512,3.29397909448022,1.50801125280162,0.397912944082302,1.16978452271472,1.79763881730844,4.75503709724327,3.38540164532424,0,0,0,0.610953983535943,0.581857461502877,0.420814919341911,0.0632365371242573,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.485561272309963,1.209294227859,0.565815239267694,0.295301892880773,0,0.775284879504663,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,0,0.354951612318675,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:86971794..86971813,- | |||
}} |
Revision as of 14:17, 14 September 2013
Short description: | p@chr7:86971794..86971813, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:86971794..86971813, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.91e-11 | 3 |
brush border epithelial cell | 1.19e-08 | 6 |
gut absorptive cell | 1.19e-08 | 6 |
enterocyte | 1.19e-08 | 6 |
defensive cell | 1.24e-07 | 7 |
columnar/cuboidal epithelial cell | 2.00e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.06e-30 | 31 |
gastrointestinal system | 5.26e-19 | 47 |
mucosa | 1.39e-16 | 15 |
small intestine | 2.23e-14 | 4 |
intestinal mucosa | 9.67e-12 | 13 |
wall of intestine | 9.67e-12 | 13 |
gastrointestinal system mucosa | 9.67e-12 | 13 |
ileal mucosa | 2.63e-11 | 3 |
ileum | 2.63e-11 | 3 |
mucosa of small intestine | 2.63e-11 | 3 |
wall of small intestine | 2.63e-11 | 3 |
organ component layer | 8.67e-10 | 24 |
gut-associated lymphoid tissue | 1.25e-07 | 2 |
mucosa-associated lymphoid tissue | 1.25e-07 | 2 |
lymphoid tissue | 1.25e-07 | 2 |
digestive system | 2.40e-07 | 116 |
digestive tract | 2.40e-07 | 116 |
primitive gut | 2.40e-07 | 116 |
endoderm-derived structure | 3.74e-07 | 118 |
endoderm | 3.74e-07 | 118 |
presumptive endoderm | 3.74e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.