FFCP PHASE1:Mm9::chr5:137443779..137443794,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=60363|HGNC=|MCL_coexpression_id=395|UniProt=Q9Z0S5|association_with_transcript=40bp_to_ENSMUST00000001790,NM_021719,uc009abg.2_5end|description=CAGE_peak_4_at_Cldn15_5end|id=chr5:137443779..137443794,+|ontology_enrichment_celltype=CL:0002563!1.09e-07!9;CL:0002251!1.09e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.50e-11,9;CL:0002251,2.50e-11,9;CL:0000239,8.59e-08,6;CL:0000677,8.59e-08,6;CL:0000584,8.59e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.68e-18!59;UBERON:0000160!8.05e-18!43;UBERON:0000344!4.40e-12!15;UBERON:0001242!1.01e-10!13;UBERON:0000060!1.01e-10!13;UBERON:0001262!1.01e-10!13;UBERON:0004786!1.01e-10!13;UBERON:0004923!4.62e-09!24;UBERON:0001007!8.09e-09!128;UBERON:0001555!8.09e-09!128;UBERON:0007026!8.09e-09!128;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0004921!5.61e-08!126;UBERON:0004185!5.61e-08!126;UBERON:0003350!1.09e-07!9;UBERON:0004808!1.09e-07!9;UBERON:0001277!1.09e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.93e-27,31;UBERON:0005409,3.26e-20,47;UBERON:0000344,2.51e-18,15;UBERON:0001242,3.74e-16,13;UBERON:0001262,3.74e-16,13;UBERON:0004786,3.74e-16,13;UBERON:0004923,1.34e-11,24;UBERON:0003350,2.50e-11,9;UBERON:0004808,2.50e-11,9;UBERON:0001277,2.50e-11,9;UBERON:0000485,9.49e-09,11|phase1_expression=0,26.1731555729521,22.2949627300873,24.1971369045464,27.5492651470491,33.575854382378,36.6771845734975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,32.3184694042681,31.4290715062023,26.4146703492909,28.861053742658,33.6135122989987,57.5770960952813,50.4060259519862,63.1931955367618,0,0,0,43.3277429626912,43.553477083925,38.3838389773254,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,5.65970759279083,4.01146815914259,7.73508138416164,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0.517875767294343,1.33597925158342,0.173485326766136,2.13125834818499,1.38369298353635,1.3565037649736,1.17588707135705,1.63366568728578,0.741584903203122,2.74738778147832,0,0.323533699894818,0,0,11.1835056730873,0,0,33.4648742323255,0,0,0,0,0,0,0,0,0,0,2.34230536855727,1.36847667671102,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0.234526059981096,1.08037236876609,0,0.983821158737019,1.07986979021165,0.930135779001631,0.804820204198858,1.5179494507732,1.15191894939436,0.32833492815819,1.37816976227955,1.46199987425332,1.97595103761946,3.35516046900929,0,0,35.6852285622502,33.5852219662701,0.213288250535234,0.928946687441754,0.77320476793256,3.02525286935014,3.7804267453628,4.37518940058886,21.8283368310475,7.5761519173045,4.52403375840485,5.96869416123452,7.21367122340745,18.8752075817387,31.9884313814547,37.0402768253123,0.189667900953082,0.342745537829186,1.1270773567308,0,0.387904974335251,0.420814919341911,1.83385957660346,2.06654207171443,3.61097074035162,3.33172342588861,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.505157755894224,0,0.482443521363367,1.29327233116623,0.568474235311454,0.162964976442026,0.339490171550376,0.469380496577004,0.502518772325447,0.952174563544055,0.780534591431195,0.472905432318573,0.664394068946325,0.478364305972461,0.163863314715738,1.55416483679306,2.31438493730419,0,0,1.47529281905711,2.48343071674259,0,0,0,1.26235463602186,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,1.41940085208269,3.91744328067962,2.11753047159649,2.8044920905331,0,0,2.11626489875326,0.377210159511796,0.885905678642318,1.84461088766356,3.35956781118687,1.81766864738753,1.42598951353889,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.968786560175433,0.603129249281559,2.02932984805332,0.164140899745061,18.6547735443104,0,0.341741761595705,1.23832120777933,1.11116716421827,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0.813277868507395,0.540026704109006,0.836353184057875,2.18362563746178,1.21377911746339,0.909188012978695,0.26175594198403,21.7753155130212,0,0,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0.316011120628178,0,0,0.129920822977795,0.537080087002444,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.403304740547362,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,1.15913756419314,1.50145980360946,2.74727436400898,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.888986911206461,0.824140228955577,0.962757628775446,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.576226371643824,0.459483751644906,0,0.579421629724277,0.38581844092741,0.824171801606613,1.17759136107518,1.02860775715625,1.59728225543404,0.238436189947321,0.581385666529314,1.12931256498397,0.761531471025089,0.548783918618318,0.789209134313529,0.407412341537585,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,0.77468420592983,0.192906610981141,0,0.233931608445408,1.07435527024149,1.3390183244819,0.661774257358546,0.695603506861264|short_description=p4@Cldn15}} | ||
|EntrezGene=60363 | |||
|HGNC= | |||
|MCL_coexpression_id=395 | |||
|UniProt=Q9Z0S5 | |||
|association_with_transcript=40bp_to_ENSMUST00000001790,NM_021719,uc009abg.2_5end | |||
|description=CAGE_peak_4_at_Cldn15_5end | |||
|id=chr5:137443779..137443794,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.09e-07!9;CL:0002251!1.09e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.50e-11,9;CL:0002251,2.50e-11,9;CL:0000239,8.59e-08,6;CL:0000677,8.59e-08,6;CL:0000584,8.59e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.68e-18!59;UBERON:0000160!8.05e-18!43;UBERON:0000344!4.40e-12!15;UBERON:0001242!1.01e-10!13;UBERON:0000060!1.01e-10!13;UBERON:0001262!1.01e-10!13;UBERON:0004786!1.01e-10!13;UBERON:0004923!4.62e-09!24;UBERON:0001007!8.09e-09!128;UBERON:0001555!8.09e-09!128;UBERON:0007026!8.09e-09!128;UBERON:0004119!1.55e-08!130;UBERON:0000925!1.55e-08!130;UBERON:0006595!1.55e-08!130;UBERON:0004921!5.61e-08!126;UBERON:0004185!5.61e-08!126;UBERON:0003350!1.09e-07!9;UBERON:0004808!1.09e-07!9;UBERON:0001277!1.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.93e-27,31;UBERON:0005409,3.26e-20,47;UBERON:0000344,2.51e-18,15;UBERON:0001242,3.74e-16,13;UBERON:0001262,3.74e-16,13;UBERON:0004786,3.74e-16,13;UBERON:0004923,1.34e-11,24;UBERON:0003350,2.50e-11,9;UBERON:0004808,2.50e-11,9;UBERON:0001277,2.50e-11,9;UBERON:0000485,9.49e-09,11 | |||
|phase1_expression=0,26.1731555729521,22.2949627300873,24.1971369045464,27.5492651470491,33.575854382378,36.6771845734975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,32.3184694042681,31.4290715062023,26.4146703492909,28.861053742658,33.6135122989987,57.5770960952813,50.4060259519862,63.1931955367618,0,0,0,43.3277429626912,43.553477083925,38.3838389773254,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,1.43752564364972,0,0,0,5.65970759279083,4.01146815914259,7.73508138416164,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,6.8510327831436,0.517875767294343,1.33597925158342,0.173485326766136,2.13125834818499,1.38369298353635,1.3565037649736,1.17588707135705,1.63366568728578,0.741584903203122,2.74738778147832,0,0.323533699894818,0,0,11.1835056730873,0,0,33.4648742323255,0,0,0,0,0,0,0,0,0,0,2.34230536855727,1.36847667671102,0.758168275301024,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0,0.234526059981096,1.08037236876609,0,0.983821158737019,1.07986979021165,0.930135779001631,0.804820204198858,1.5179494507732,1.15191894939436,0.32833492815819,1.37816976227955,1.46199987425332,1.97595103761946,3.35516046900929,0,0,35.6852285622502,33.5852219662701,0.213288250535234,0.928946687441754,0.77320476793256,3.02525286935014,3.7804267453628,4.37518940058886,21.8283368310475,7.5761519173045,4.52403375840485,5.96869416123452,7.21367122340745,18.8752075817387,31.9884313814547,37.0402768253123,0.189667900953082,0.342745537829186,1.1270773567308,0,0.387904974335251,0.420814919341911,1.83385957660346,2.06654207171443,3.61097074035162,3.33172342588861,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0.505157755894224,0,0.482443521363367,1.29327233116623,0.568474235311454,0.162964976442026,0.339490171550376,0.469380496577004,0.502518772325447,0.952174563544055,0.780534591431195,0.472905432318573,0.664394068946325,0.478364305972461,0.163863314715738,1.55416483679306,2.31438493730419,0,0,1.47529281905711,2.48343071674259,0,0,0,1.26235463602186,0.315508219416257,0,0,0.238968797952552,0,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,1.41940085208269,3.91744328067962,2.11753047159649,2.8044920905331,0,0,2.11626489875326,0.377210159511796,0.885905678642318,1.84461088766356,3.35956781118687,1.81766864738753,1.42598951353889,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0.968786560175433,0.603129249281559,2.02932984805332,0.164140899745061,18.6547735443104,0,0.341741761595705,1.23832120777933,1.11116716421827,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0.813277868507395,0.540026704109006,0.836353184057875,2.18362563746178,1.21377911746339,0.909188012978695,0.26175594198403,21.7753155130212,0,0,0,0.165458490457098,0,0.387479470433193,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0.316011120628178,0,0,0.129920822977795,0.537080087002444,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.403304740547362,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,1.15913756419314,1.50145980360946,2.74727436400898,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.888986911206461,0.824140228955577,0.962757628775446,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,0.576226371643824,0.459483751644906,0,0.579421629724277,0.38581844092741,0.824171801606613,1.17759136107518,1.02860775715625,1.59728225543404,0.238436189947321,0.581385666529314,1.12931256498397,0.761531471025089,0.548783918618318,0.789209134313529,0.407412341537585,1.12228454331548,0.593175090620871,0.788035859004508,0.818462086339379,0.77468420592983,0.192906610981141,0,0.233931608445408,1.07435527024149,1.3390183244819,0.661774257358546,0.695603506861264 | |||
|short_description=p4@Cldn15 | |||
}} |
Revision as of 06:43, 14 September 2013
Short description: | p4@Cldn15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cldn15_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 40bp_to_ENSMUST00000001790, NM_021719, uc009abg.2_5end |
EntrezGene: | Cldn15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.50e-11 | 9 |
epithelial cell of alimentary canal | 2.50e-11 | 9 |
brush border epithelial cell | 8.59e-08 | 6 |
gut absorptive cell | 8.59e-08 | 6 |
enterocyte | 8.59e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.93e-27 | 31 |
gastrointestinal system | 3.26e-20 | 47 |
mucosa | 2.51e-18 | 15 |
intestinal mucosa | 3.74e-16 | 13 |
wall of intestine | 3.74e-16 | 13 |
gastrointestinal system mucosa | 3.74e-16 | 13 |
organ component layer | 1.34e-11 | 24 |
epithelium of mucosa | 2.50e-11 | 9 |
gastrointestinal system epithelium | 2.50e-11 | 9 |
intestinal epithelium | 2.50e-11 | 9 |
simple columnar epithelium | 9.49e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.