FFCP PHASE1:Mm9::chr11:109224085..109224168,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14674|HGNC=|MCL_coexpression_id=1547|UniProt=P27601,Q9D034,A2AA49,Q3UE40,Q8K086|association_with_transcript=0bp_to_ENSMUST00000020930,ENSMUST00000106702,NM_010303,uc007mcd.1,uc007mce.1,uc011ygt.1_5end|description=CAGE_peak_1_at_Gna13_5end|id=chr11:109224085..109224168,+|ontology_enrichment_celltype=CL:0000988!1.66e-08!32;CL:0002032!1.66e-08!32;CL:0000037!1.66e-08!32;CL:0000566!1.66e-08!32;CL:0000837!1.66e-08!32;CL:0000063!2.34e-08!66;CL:0000219!3.05e-07!54|ontology_enrichment_celltype_v019_2=CL:0000988,1.66e-08,32;CL:0002032,1.66e-08,32;CL:0000037,1.66e-08,32;CL:0000837,1.66e-08,32;CL:0000219,3.05e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.05e-09!48;UBERON:0002390!8.17e-08!45;UBERON:0003061!8.17e-08!45;UBERON:0004923!1.46e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.05e-09,48;UBERON:0002405,8.05e-09,48;UBERON:0000160,2.18e-08,31;UBERON:0002390,8.17e-08,45;UBERON:0003061,8.17e-08,45;UBERON:0004923,1.46e-07,24;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118;UBERON:0001007,4.05e-07,116;UBERON:0001555,4.05e-07,116;UBERON:0007026,4.05e-07,116|phase1_expression=11.5307169915452,54.7891389993797,81.8998630901165,57.4682001482977,121.216766647016,27.364321321638,26.8654536684855,28.1488845102636,132.62297626687,160.80232958321,32.1889780263949,22.0968880417082,21.2288905114695,21.0683169829784,10.6595123781012,14.1732687172878,16.7894850750755,32.1771408665402,27.285772287542,38.1950686618227,11.2257142999412,12.7092417537133,10.1867917764185,20.9590073859363,24.31738379312,48.2354849856617,55.9990595006797,36.6301095566011,18.6222951067246,27.7233142735924,22.6165120868411,12.7006134691926,15.9916844771988,0,15.3091358468176,15.1273527276228,12.2501613757421,50.6423273191658,29.6907430919044,24.6056159667685,44.1173616023261,41.6657745824652,44.181442125835,8.68688044031483,10.3404469843905,12.114085642671,13.3006528539167,23.3286917327078,13.8402295122717,16.7209713203884,20.4380175573029,21.5628846547457,66.6096946049213,50.0499877987828,39.9951620979532,13.1202312378333,11.1748041576115,13.4074743992135,6.06949382578793,7.40587370980846,5.70448263155561,17.6199156675949,12.450127145556,8.99899717281399,10.8775299882367,4.2628806896766,14.3808053048834,11.5265491596466,9.53944433237994,8.77538599155989,9.88527318351495,10.8547374073445,9.49734726091938,7.34944795289724,9.39285615978716,5.51531271966013,9.91042928994498,11.4918604276669,11.6740965274745,7.78129097608144,8.69132614222892,7.8137005583514,8.37548997004143,10.6924895906019,10.5430790965999,10.606629077052,9.8236459751381,10.8111678578674,19.764536459961,19.5730340676574,37.6823835312181,22.371020801516,50.3178786943735,5.93673510801599,7.14754059192436,2.68816132258401,9.69066498909088,9.88495870952735,10.9110121933205,12.0135455333516,10.8449433228044,11.5493829672886,33.1246811618639,49.7746692207332,5.41227602528035,6.33399663687746,4.04419556011827,16.0999270403875,24.8580368301285,12.1722554033156,10.9295755862666,8.8294988710521,11.3001593655469,15.8258772580254,16.2272415847273,12.0639927676488,41.7759495471092,16.6289260457898,17.6922110389975,15.0443170451091,19.4340536245146,17.9403843660032,42.8701050801681,15.517382241612,14.2423760633149,28.3557331281536,40.617327207507,46.7924130174858,31.6404865411931,17.6752954497691,10.980014467647,11.5602003943835,13.5582969749976,10.4843337505436,13.2984348518118,13.3037835715561,13.5446353920921,18.4122316502938,10.6143558542143,5.89237196482127,8.71806967850115,5.9774547152703,9.18316862007281,9.49440352365005,11.2940588591204,9.60852902136373,10.2134879770104,8.2785078636485,7.76044774558232,8.88798576788751,6.862093842394,10.7405908889512,8.06337022754234,12.8853301613202,9.4659782747654,9.75267907410617,28.0885274925294,28.3082697826187,23.3014069504386,8.28503090142008,7.27030785941398,6.48223421259654,6.15536312521547,8.65762619688577,6.47921874126989,8.13868806626427,9.12129564758705,10.1585847859437,10.3672705445493,10.6708851651412,11.5928397650574,11.8421989814519,10.0993053033883,10.7365135008297,9.2527577368216,12.0398396483763,30.0681092515256,28.5606611996628,10.2378360256912,9.52170354627798,10.3093969057675,13.9161631990106,14.2321948060717,12.7451169495415,23.2519240156811,19.7638745668813,17.3421294072186,20.6914730922797,15.5971269695296,24.268124033664,21.18152888772,24.8926591567959,8.53505554288868,7.31190480702264,11.270773567308,8.96065842519383,11.8311017172252,15.0792012764185,13.1531997218455,11.513591542409,12.55989822731,11.3525390808056,7.41131567717872,9.17648081438517,8.25547779475453,10.5685192820881,8.92584534109413,7.23531479257251,6.62027214631691,13.5217184601881,15.8892522239535,13.453509246216,25.8782771749238,11.5363693777236,11.8574315783533,7.32478746046624,8.96987067609561,10.1313139486307,20.6923572986597,8.90609635321278,9.4519686336375,8.65699937453459,8.68353918667458,16.0806007144143,17.615229425565,28.0992452915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| ||
|EntrezGene=14674 | |||
|HGNC= | |||
|MCL_coexpression_id=1547 | |||
|UniProt=P27601,Q9D034,A2AA49,Q3UE40,Q8K086 | |||
|association_with_transcript=0bp_to_ENSMUST00000020930,ENSMUST00000106702,NM_010303,uc007mcd.1,uc007mce.1,uc011ygt.1_5end | |||
|description=CAGE_peak_1_at_Gna13_5end | |||
|id=chr11:109224085..109224168,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.66e-08!32;CL:0002032!1.66e-08!32;CL:0000037!1.66e-08!32;CL:0000566!1.66e-08!32;CL:0000837!1.66e-08!32;CL:0000063!2.34e-08!66;CL:0000219!3.05e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.66e-08,32;CL:0002032,1.66e-08,32;CL:0000037,1.66e-08,32;CL:0000837,1.66e-08,32;CL:0000219,3.05e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.05e-09!48;UBERON:0002390!8.17e-08!45;UBERON:0003061!8.17e-08!45;UBERON:0004923!1.46e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.05e-09,48;UBERON:0002405,8.05e-09,48;UBERON:0000160,2.18e-08,31;UBERON:0002390,8.17e-08,45;UBERON:0003061,8.17e-08,45;UBERON:0004923,1.46e-07,24;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118;UBERON:0001007,4.05e-07,116;UBERON:0001555,4.05e-07,116;UBERON:0007026,4.05e-07,116 | |||
|phase1_expression=11.5307169915452,54.7891389993797,81.8998630901165,57.4682001482977,121.216766647016,27.364321321638,26.8654536684855,28.1488845102636,132.62297626687,160.80232958321,32.1889780263949,22.0968880417082,21.2288905114695,21.0683169829784,10.6595123781012,14.1732687172878,16.7894850750755,32.1771408665402,27.285772287542,38.1950686618227,11.2257142999412,12.7092417537133,10.1867917764185,20.9590073859363,24.31738379312,48.2354849856617,55.9990595006797,36.6301095566011,18.6222951067246,27.7233142735924,22.6165120868411,12.7006134691926,15.9916844771988,0,15.3091358468176,15.1273527276228,12.2501613757421,50.6423273191658,29.6907430919044,24.6056159667685,44.1173616023261,41.6657745824652,44.181442125835,8.68688044031483,10.3404469843905,12.114085642671,13.3006528539167,23.3286917327078,13.8402295122717,16.7209713203884,20.4380175573029,21.5628846547457,66.6096946049213,50.0499877987828,39.9951620979532,13.1202312378333,11.1748041576115,13.4074743992135,6.06949382578793,7.40587370980846,5.70448263155561,17.6199156675949,12.450127145556,8.99899717281399,10.8775299882367,4.2628806896766,14.3808053048834,11.5265491596466,9.53944433237994,8.77538599155989,9.88527318351495,10.8547374073445,9.49734726091938,7.34944795289724,9.39285615978716,5.51531271966013,9.91042928994498,11.4918604276669,11.6740965274745,7.78129097608144,8.69132614222892,7.8137005583514,8.37548997004143,10.6924895906019,10.5430790965999,10.606629077052,9.8236459751381,10.8111678578674,19.764536459961,19.5730340676574,37.6823835312181,22.371020801516,50.3178786943735,5.93673510801599,7.14754059192436,2.68816132258401,9.69066498909088,9.88495870952735,10.9110121933205,12.0135455333516,10.8449433228044,11.5493829672886,33.1246811618639,49.7746692207332,5.41227602528035,6.33399663687746,4.04419556011827,16.0999270403875,24.8580368301285,12.1722554033156,10.9295755862666,8.8294988710521,11.3001593655469,15.8258772580254,16.2272415847273,12.0639927676488,41.7759495471092,16.6289260457898,17.6922110389975,15.0443170451091,19.4340536245146,17.9403843660032,42.8701050801681,15.517382241612,14.2423760633149,28.3557331281536,40.617327207507,46.7924130174858,31.6404865411931,17.6752954497691,10.980014467647,11.5602003943835,13.5582969749976,10.4843337505436,13.2984348518118,13.3037835715561,13.5446353920921,18.4122316502938,10.6143558542143,5.89237196482127,8.71806967850115,5.9774547152703,9.18316862007281,9.49440352365005,11.2940588591204,9.60852902136373,10.2134879770104,8.2785078636485,7.76044774558232,8.88798576788751,6.862093842394,10.7405908889512,8.06337022754234,12.8853301613202,9.4659782747654,9.75267907410617,28.0885274925294,28.3082697826187,23.3014069504386,8.28503090142008,7.27030785941398,6.48223421259654,6.15536312521547,8.65762619688577,6.47921874126989,8.13868806626427,9.12129564758705,10.1585847859437,10.3672705445493,10.6708851651412,11.5928397650574,11.8421989814519,10.0993053033883,10.7365135008297,9.2527577368216,12.0398396483763,30.0681092515256,28.5606611996628,10.2378360256912,9.52170354627798,10.3093969057675,13.9161631990106,14.2321948060717,12.7451169495415,23.2519240156811,19.7638745668813,17.3421294072186,20.6914730922797,15.5971269695296,24.268124033664,21.18152888772,24.8926591567959,8.53505554288868,7.31190480702264,11.270773567308,8.96065842519383,11.8311017172252,15.0792012764185,13.1531997218455,11.513591542409,12.55989822731,11.3525390808056,7.41131567717872,9.17648081438517,8.25547779475453,10.5685192820881,8.92584534109413,7.23531479257251,6.62027214631691,13.5217184601881,15.8892522239535,13.453509246216,25.8782771749238,11.5363693777236,11.8574315783533,7.32478746046624,8.96987067609561,10.1313139486307,20.6923572986597,8.90609635321278,9.4519686336375,8.65699937453459,8.68353918667458,16.0806007144143,17.615229425565,28.099245291523,21.438379598442,22.8108630338238,25.0343986792255,19.1720078217413,22.4490476425664,18.2257813812705,28.6503439484617,27.7391898747542,24.5882136509518,12.417153583713,13.9679013289379,19.2227166011213,10.9836413402373,11.6136626514012,7.88770548540642,9.37052986311932,6.03185513651837,10.7535959078648,9.80314165962534,12.7384438854975,6.47697122679831,9.05993159525067,8.30104333687699,10.2822821254978,14.6198287764517,9.08134578703002,17.1031307321255,11.2179683621324,6.63725691699814,3.8844901784797,5.13950046840077,7.16699303072413,5.31543407185391,9.83792473420568,13.1798429515793,6.5436071305951,6.41695281092498,8.53299246426703,11.5960469432499,7.21948802737308,12.5962654128902,7.38250485528372,6.20921682157222,9.00215547132688,6.38424841112185,5.70780216326626,9.05019613311665,9.13394847343798,14.0803024838226,28.5973295666157,5.07215315526412,14.5099902588502,16.6308359496783,18.2145033283031,16.3540111284297,13.9519764783302,24.4843902769075,17.9862542950194,16.7453463181896,11.144890870014,11.1116716421827,14.5043711893612,19.6839687918276,18.7598102029349,64.7617818276589,54.3011635015793,63.5719879500349,6.68269432610579,8.69923982348122,8.94605655358134,11.88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| |||
|short_description=p1@Gna13 | |||
}} |
Revision as of 18:38, 12 September 2013
Short description: | p1@Gna13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gna13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1547 |
Association with transcript: | 0bp_to_ENSMUST00000020930, ENSMUST00000106702, NM_010303, uc007mcd.1, uc007mce.1, uc011ygt.1_5end |
EntrezGene: | Gna13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.66e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.66e-08 | 32 |
hematopoietic stem cell | 1.66e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.66e-08 | 32 |
motile cell | 3.05e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.05e-09 | 48 |
immune system | 8.05e-09 | 48 |
intestine | 2.18e-08 | 31 |
hematopoietic system | 8.17e-08 | 45 |
blood island | 8.17e-08 | 45 |
organ component layer | 1.46e-07 | 24 |
endoderm-derived structure | 1.56e-07 | 118 |
endoderm | 1.56e-07 | 118 |
presumptive endoderm | 1.56e-07 | 118 |
digestive system | 4.05e-07 | 116 |
digestive tract | 4.05e-07 | 116 |
primitive gut | 4.05e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.