FFCP PHASE1:Mm9::chr11:4839683..4839697,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=602|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:4839683..4839697,-|id=chr11:4839683..4839697,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-12,23;CL:0000337,1.05e-12,23;CL:0002610,4.94e-11,3;CL:0002614,2.15e-10,3;CL:0000540,2.76e-08,33;CL:0000047,2.76e-08,33;CL:0000031,2.76e-08,33;CL:0000404,2.76e-08,33;CL:0002611,2.42e-07,2;CL:0000393,9.97e-07,39;CL:0000211,9.97e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.09e-17!52;UBERON:0005068!4.09e-17!52;UBERON:0006241!4.09e-17!52;UBERON:0007135!4.09e-17!52;UBERON:0002346!6.41e-17!71;UBERON:0003075!6.41e-17!71;UBERON:0007284!6.41e-17!71;UBERON:0007811!1.33e-15!86;UBERON:0000955!1.75e-15!50;UBERON:0006238!1.75e-15!50;UBERON:0002616!8.17e-15!49;UBERON:0000033!1.55e-14!63;UBERON:0000073!7.01e-14!75;UBERON:0001016!7.01e-14!75;UBERON:0001017!2.85e-13!73;UBERON:0005743!2.85e-13!73;UBERON:0004121!6.82e-13!102;UBERON:0000924!6.82e-13!102;UBERON:0006601!6.82e-13!102;UBERON:0000153!7.96e-13!94;UBERON:0002020!1.58e-10!34;UBERON:0003080!2.31e-10!40;UBERON:0003056!2.38e-10!49;UBERON:0002021!7.91e-10!10;UBERON:0000411!7.91e-10!10;UBERON:0001950!7.91e-10!10;UBERON:0002780!1.24e-09!39;UBERON:0001890!1.24e-09!39;UBERON:0006240!1.24e-09!39;UBERON:0003076!2.61e-08!12;UBERON:0003057!2.61e-08!12;UBERON:0002298!2.23e-07!6;UBERON:0002240!4.11e-07!6;UBERON:0005174!4.11e-07!6;UBERON:0001137!4.11e-07!6;UBERON:0002791!5.75e-07!29;UBERON:0003528!5.75e-07!29;UBERON:0001893!5.75e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.62e-32,54;UBERON:0001049,1.46e-27,52;UBERON:0005068,1.46e-27,52;UBERON:0006241,1.46e-27,52;UBERON:0007135,1.46e-27,52;UBERON:0001017,8.48e-25,73;UBERON:0001016,5.22e-24,75;UBERON:0002346,1.10e-23,64;UBERON:0003075,1.10e-23,64;UBERON:0007284,1.10e-23,64;UBERON:0003076,2.82e-20,12;UBERON:0003057,2.82e-20,12;UBERON:0010371,3.43e-20,73;UBERON:0004121,1.35e-19,95;UBERON:0000924,1.35e-19,95;UBERON:0006601,1.35e-19,95;UBERON:0002616,4.68e-18,46;UBERON:0000955,1.36e-17,47;UBERON:0006238,1.36e-17,47;UBERON:0002020,2.64e-15,34;UBERON:0010314,4.72e-15,92;UBERON:0002021,5.84e-14,10;UBERON:0000411,5.84e-14,10;UBERON:0001950,5.84e-14,10;UBERON:0002240,8.15e-14,6;UBERON:0005174,8.15e-14,6;UBERON:0001137,8.15e-14,6;UBERON:0002950,3.02e-13,4;UBERON:0001891,3.02e-13,4;UBERON:0009616,3.02e-13,4;UBERON:0010286,3.02e-13,4;UBERON:0003080,2.49e-12,40;UBERON:0003056,4.23e-11,49;UBERON:0004684,4.94e-11,3;UBERON:0002275,4.94e-11,3;UBERON:0002780,8.61e-11,39;UBERON:0001890,8.61e-11,39;UBERON:0006240,8.61e-11,39;UBERON:0001948,9.81e-11,5;UBERON:0002315,9.81e-11,5;UBERON:0002038,2.15e-10,3;UBERON:0009663,2.15e-10,3;UBERON:0009661,2.15e-10,3;UBERON:0000125,2.15e-10,3;UBERON:0002308,2.15e-10,3;UBERON:0000025,4.38e-10,114;UBERON:0004111,4.05e-09,122;UBERON:0003528,6.84e-09,29;UBERON:0002791,6.84e-09,29;UBERON:0001893,6.84e-09,29;UBERON:0004733,2.38e-08,6;UBERON:0004732,2.38e-08,6;UBERON:0002028,2.38e-08,6;UBERON:0007277,2.38e-08,6;UBERON:0002619,7.49e-08,17;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002256,2.42e-07,2|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.84473233291,0.70219357896598,0.171217968225505,0.478632953972018,0,0,0,0,0.699561878128147,0.315462165358238,0,0,0.340173160604279,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,4.63823935998388,0,0,0,7.70811166995721,14.300981865541,16.2822925251618,0,0,0,16.1926139420801,1.68828783009504,6.26472815884921,11.490514833473,6.12198227436143,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,3.44518470631092,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,2.70124457927428,3.73154905055843,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,9.49414661396846,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.713475270408282,1.31639216481697,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,17.8008289930089,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.38983152295901,0.192423683280659,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.22227665555024,0.572895513439397,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0,0,0.169229215783353,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p@chr11:4839683..4839697,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=602 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:4839683..4839697,- | |||
|id=chr11:4839683..4839697,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-12,23;CL:0000337,1.05e-12,23;CL:0002610,4.94e-11,3;CL:0002614,2.15e-10,3;CL:0000540,2.76e-08,33;CL:0000047,2.76e-08,33;CL:0000031,2.76e-08,33;CL:0000404,2.76e-08,33;CL:0002611,2.42e-07,2;CL:0000393,9.97e-07,39;CL:0000211,9.97e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.09e-17!52;UBERON:0005068!4.09e-17!52;UBERON:0006241!4.09e-17!52;UBERON:0007135!4.09e-17!52;UBERON:0002346!6.41e-17!71;UBERON:0003075!6.41e-17!71;UBERON:0007284!6.41e-17!71;UBERON:0007811!1.33e-15!86;UBERON:0000955!1.75e-15!50;UBERON:0006238!1.75e-15!50;UBERON:0002616!8.17e-15!49;UBERON:0000033!1.55e-14!63;UBERON:0000073!7.01e-14!75;UBERON:0001016!7.01e-14!75;UBERON:0001017!2.85e-13!73;UBERON:0005743!2.85e-13!73;UBERON:0004121!6.82e-13!102;UBERON:0000924!6.82e-13!102;UBERON:0006601!6.82e-13!102;UBERON:0000153!7.96e-13!94;UBERON:0002020!1.58e-10!34;UBERON:0003080!2.31e-10!40;UBERON:0003056!2.38e-10!49;UBERON:0002021!7.91e-10!10;UBERON:0000411!7.91e-10!10;UBERON:0001950!7.91e-10!10;UBERON:0002780!1.24e-09!39;UBERON:0001890!1.24e-09!39;UBERON:0006240!1.24e-09!39;UBERON:0003076!2.61e-08!12;UBERON:0003057!2.61e-08!12;UBERON:0002298!2.23e-07!6;UBERON:0002240!4.11e-07!6;UBERON:0005174!4.11e-07!6;UBERON:0001137!4.11e-07!6;UBERON:0002791!5.75e-07!29;UBERON:0003528!5.75e-07!29;UBERON:0001893!5.75e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.62e-32,54;UBERON:0001049,1.46e-27,52;UBERON:0005068,1.46e-27,52;UBERON:0006241,1.46e-27,52;UBERON:0007135,1.46e-27,52;UBERON:0001017,8.48e-25,73;UBERON:0001016,5.22e-24,75;UBERON:0002346,1.10e-23,64;UBERON:0003075,1.10e-23,64;UBERON:0007284,1.10e-23,64;UBERON:0003076,2.82e-20,12;UBERON:0003057,2.82e-20,12;UBERON:0010371,3.43e-20,73;UBERON:0004121,1.35e-19,95;UBERON:0000924,1.35e-19,95;UBERON:0006601,1.35e-19,95;UBERON:0002616,4.68e-18,46;UBERON:0000955,1.36e-17,47;UBERON:0006238,1.36e-17,47;UBERON:0002020,2.64e-15,34;UBERON:0010314,4.72e-15,92;UBERON:0002021,5.84e-14,10;UBERON:0000411,5.84e-14,10;UBERON:0001950,5.84e-14,10;UBERON:0002240,8.15e-14,6;UBERON:0005174,8.15e-14,6;UBERON:0001137,8.15e-14,6;UBERON:0002950,3.02e-13,4;UBERON:0001891,3.02e-13,4;UBERON:0009616,3.02e-13,4;UBERON:0010286,3.02e-13,4;UBERON:0003080,2.49e-12,40;UBERON:0003056,4.23e-11,49;UBERON:0004684,4.94e-11,3;UBERON:0002275,4.94e-11,3;UBERON:0002780,8.61e-11,39;UBERON:0001890,8.61e-11,39;UBERON:0006240,8.61e-11,39;UBERON:0001948,9.81e-11,5;UBERON:0002315,9.81e-11,5;UBERON:0002038,2.15e-10,3;UBERON:0009663,2.15e-10,3;UBERON:0009661,2.15e-10,3;UBERON:0000125,2.15e-10,3;UBERON:0002308,2.15e-10,3;UBERON:0000025,4.38e-10,114;UBERON:0004111,4.05e-09,122;UBERON:0003528,6.84e-09,29;UBERON:0002791,6.84e-09,29;UBERON:0001893,6.84e-09,29;UBERON:0004733,2.38e-08,6;UBERON:0004732,2.38e-08,6;UBERON:0002028,2.38e-08,6;UBERON:0007277,2.38e-08,6;UBERON:0002619,7.49e-08,17;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0002256,2.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.84473233291,0.70219357896598,0.171217968225505,0.478632953972018,0,0,0,0,0.699561878128147,0.315462165358238,0,0,0.340173160604279,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85650984403804,4.63823935998388,0,0,0,7.70811166995721,14.300981865541,16.2822925251618,0,0,0,16.1926139420801,1.68828783009504,6.26472815884921,11.490514833473,6.12198227436143,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0,0,0.608930956624282,0,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.25668024088073,0,0,0,0,3.44518470631092,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,2.70124457927428,3.73154905055843,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,9.49414661396846,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.713475270408282,1.31639216481697,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,17.8008289930089,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0.339956859987711,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0.240390899039938,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.38983152295901,0.192423683280659,0,0,0,0,0,0,0,0,0,0,1.6942555278512,3.22227665555024,0.572895513439397,2.23409137046794,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,1.35942722695261,2.5888015587591,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.114870937911227,0,0,0.38581844092741,0,0,0.685738504770831,0,0.476872379894642,0,0,0.169229215783353,0,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:4839683..4839697,- | |||
}} |
Revision as of 19:45, 12 September 2013
Short description: | p@chr11:4839683..4839697, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:4839683..4839697, - |
Coexpression cluster: | MCL_coexpression_mm9:602 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-12 | 23 |
raphe nuclei neuron | 4.94e-11 | 3 |
neuron of the substantia nigra | 2.15e-10 | 3 |
neuron | 2.76e-08 | 33 |
neuronal stem cell | 2.76e-08 | 33 |
neuroblast | 2.76e-08 | 33 |
electrically signaling cell | 2.76e-08 | 33 |
neuron of the dorsal spinal cord | 2.42e-07 | 2 |
electrically responsive cell | 9.97e-07 | 39 |
electrically active cell | 9.97e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.