FFCP PHASE1:Mm9::chr7:20214704..20214800,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19698|HGNC=|MCL_coexpression_id=589|UniProt=Q8K220,Q04863,Q4U109|association_with_transcript=0bp_to_ENSMUST00000049912,ENSMUST00000094762,ENSMUST00000108452,ENSMUST00000131759,ENSMUST00000137615,ENSMUST00000148040,NM_009046,uc009fmo.1,uc009fmp.1_5end|description=CAGE_peak_1_at_Relb_5end|id=chr7:20214704..20214800,-|ontology_enrichment_celltype=CL:0000063!6.00e-12!66;CL:0002320!1.89e-07!46;CL:0000134!1.89e-07!46;CL:0000988!3.58e-07!32;CL:0002032!3.58e-07!32;CL:0000037!3.58e-07!32;CL:0000566!3.58e-07!32;CL:0000837!3.58e-07!32;CL:0000219!8.03e-07!54|ontology_enrichment_celltype_v019_2=CL:0002320,5.35e-08,46;CL:0000134,5.35e-08,46;CL:0000988,9.75e-08,32;CL:0002032,9.75e-08,32;CL:0000037,9.75e-08,32;CL:0000837,9.75e-08,32;CL:0000219,2.32e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.84e-17!48;UBERON:0002390!4.27e-15!45;UBERON:0003061!4.27e-15!45;UBERON:0003081!2.09e-12!88;UBERON:0000072!3.03e-09!27;UBERON:0002405!3.47e-09!70;UBERON:0004177!1.79e-08!29;UBERON:0003408!2.99e-08!24;UBERON:0001004!3.25e-08!42;UBERON:0002370!7.26e-08!23;UBERON:0000974!7.26e-08!23;UBERON:0004807!7.26e-08!23;UBERON:0005058!7.26e-08!23;UBERON:0003351!7.26e-08!23;UBERON:0009113!7.26e-08!23;UBERON:0003295!7.26e-08!23;UBERON:0009722!7.26e-08!23;UBERON:0005562!7.26e-08!23;UBERON:0007690!7.26e-08!23;UBERON:0000065!7.39e-08!41;UBERON:0002371!9.56e-08!16;UBERON:0006562!9.57e-08!24;UBERON:0001557!9.57e-08!24;UBERON:0001042!9.57e-08!24;UBERON:0008814!9.57e-08!24;UBERON:0009145!9.57e-08!24;UBERON:0002384!1.89e-07!46;UBERON:0000926!5.53e-07!193;UBERON:0004120!5.53e-07!193;UBERON:0006603!5.53e-07!193;UBERON:0002204!5.96e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.23e-17,48;UBERON:0002405,3.23e-17,48;UBERON:0002390,1.68e-15,45;UBERON:0003061,1.68e-15,45;UBERON:0003081,9.32e-12,87;UBERON:0000072,1.48e-09,27;UBERON:0000077,1.96e-09,35;UBERON:0000926,2.29e-09,120;UBERON:0004120,2.29e-09,120;UBERON:0006603,2.29e-09,120;UBERON:0004177,9.35e-09,29;UBERON:0005057,9.35e-09,29;UBERON:0003408,1.52e-08,24;UBERON:0002370,3.76e-08,23;UBERON:0000974,3.76e-08,23;UBERON:0004807,3.76e-08,23;UBERON:0005058,3.76e-08,23;UBERON:0003351,3.76e-08,23;UBERON:0009113,3.76e-08,23;UBERON:0003295,3.76e-08,23;UBERON:0009722,3.76e-08,23;UBERON:0005562,3.76e-08,23;UBERON:0007690,3.76e-08,23;UBERON:0001004,4.48e-08,42;UBERON:0006562,5.04e-08,24;UBERON:0001557,5.04e-08,24;UBERON:0001042,5.04e-08,24;UBERON:0008814,5.04e-08,24;UBERON:0009145,5.04e-08,24;UBERON:0002384,5.35e-08,46;UBERON:0002371,7.72e-08,16;UBERON:0000065,1.02e-07,41;UBERON:0004119,7.29e-07,118;UBERON:0000925,7.29e-07,118;UBERON:0006595,7.29e-07,118;UBERON:0002204,8.81e-07,32;UBERON:0001007,8.99e-07,116;UBERON:0001555,8.99e-07,116;UBERON:0007026,8.99e-07,116|phase1_expression=1.76163731815273,58.976843891052,78.2598691750002,6.95667686005709,9.01612313903425,44.9916448723865,35.976346651711,11.7502224331834,84.1916558466967,105.329036844897,33.558721772199,32.6268130290926,8.56003649656029,8.13009742496676,3.66420737997229,4.04950534779652,2.79824751251259,15.2999150198745,16.0423887318714,19.9463136345074,2.21112554392781,1.68794617041505,0.783599367416806,17.9191513528615,25.9232487605902,49.9581808780068,55.1375355083616,49.9893259831263,6.84084310042946,6.5527833737582,30.3770799597767,0,0,0,4.33277429626912,1.16364251750945,2.6542016314108,0.837063261473815,0.7813353445238,1.0470474879476,3.52938892818609,4.78131839470912,1.94204141212461,17.7514513345564,19.8698785190249,6.05704282133549,7.04152209913235,2.39827672018491,3.51497892375155,3.11087838518853,2.93971485413261,0,20.4694779390438,10.1550699881588,15.1242209614109,8.7468208252222,10.3152038377952,8.76642556871652,0.202316460859598,0.528990979272033,1.26766280701236,6.77689064138264,3.55717918444456,30.1466405289269,26.6993917893083,26.2877642530057,12.2836045312546,10.7581125490035,0.103689612308478,0.540023753326763,0.210324961351382,1.71390590642282,2.65042249141936,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.614426133024974,0.131886287730194,0.548925861614458,0,0.837548997004143,0,1.68078072554491,2.06240009831567,2.27794689278565,0.931997229126503,2.42323818666189,0.831287161174641,23.7688880735376,3.44169550792555,7.47968467078526,1.07940638327563,0.649776417447669,0.448026887097336,3.23022166303029,1.53387290320252,2.85764605063156,1.06001872353102,2.53518155598025,1.28326477414318,5.09610479413291,0,15.8038459938186,15.7083116594561,21.2320266906209,3.76806803072898,15.2773351351831,6.67989625791711,1.56136794089522,1.82679286987285,4.61230994512117,3.01445281105245,3.64524992120685,3.51866455723091,0.988779870937496,2.16899035379867,0.884610551949874,4.20593809863264,3.75430581382669,2.42437626567611,0,0,0.628340120440365,9.45191104271788,21.3270921620538,16.197373736822,12.7070227073065,0.898743836428936,0.915001205637253,1.88481528169297,0.695297280769106,1.79000820131231,1.45451631191692,1.29793010454206,3.86989582631202,3.73220911830279,0.758168275301024,1.26265113531884,0.390361328888111,0.459804208866946,0.360124259610698,1.65775299619287,1.08858398642125,0.384341160854549,0.562210347358373,0.517406741478031,0.431135985865684,0.756424320671277,1.40760899331159,1.53437012699302,2.50242524303038,1.74126083261083,1.64625709126355,0.59710280045548,4.91549231119264,10.0365683774739,9.37739548005456,1.03562886267751,1.87620847984877,0.900310307305074,1.18372367792605,1.77087808572663,1.07986979021165,0.930135779001631,2.14618721119695,2.56883753207773,2.96207729844265,3.61168420974009,3.08061476274252,4.09359964790931,5.70830299756732,4.16039898157152,1.05144974282064,0.308713837137853,2.97376904685418,2.3800550999719,0.426576501070468,1.85789337488351,1.03093969057675,0.80673409849337,1.11189021922435,2.09248188723815,7.11793592316767,1.81168850196412,2.5133520880027,2.18852119245266,2.33956904542944,1.79763881730844,4.97117514711797,3.78368419183298,0.948339504765408,1.48523066392647,3.38123207019241,0.610953983535943,0.969762435838129,2.66516115583211,2.02356918797623,2.06654207171443,2.82597710114475,2.09775178667061,0.889357881261447,0.500535317148282,0.589676985339609,1.12431056192427,0.811440485554012,0.964708639009667,0.763877555344259,1.43848068725405,2.10775794807546,2.19649130550465,5.75072826109418,2.23284568601102,0.936113019343682,3.03094653536534,0.538192240565737,1.4473305640901,3.8798169934987,0.757965647081939,0.977789858652155,1.52770577197669,0.704070744865506,3.1826188913945,0.952174563544055,2.92700471786698,3.31033802623001,3.5434350343804,4.78364305972461,7.53771247692395,8.80693407516067,5.06271705035291,15.0791283939272,31.5465296614852,1.96705709207614,1.37968373152366,0.481651769963376,0.703270119553219,4.91804836130026,2.52470927204373,2.2085575359138,2.34263246577983,0.861693590931196,0.716906393857656,1.78238939265915,3.11384183867716,2.02405350837447,1.46127928955656,2.76701444562566,0.963963949265421,3.69044221541498,1.6025904330053,4.72372182125371,2.14461159864296,0,1.45668381692989,1.209294227859,1.69744571780308,2.95301892880773,2.45948118355142,3.35956781118687,3.99887102425256,2.13898427030833,1.8962205476149,2.10837217149998,1.03135543248187,2.7235168460303,0.36012218806262,0.646793418913773,0.643011105094777,0.354680467284547,2.14042581122485,1.48094118541909,1.8267896946876,3.28540391289194,2.1183207086382,2.20528398054962,6.26567761177624,5.16686165426898,2.89502039655148,2.26807453605959,1.80554989719567,4.66369338607761,0.18542530201051,8.03093139749908,1.03193433981611,3.1483069652851,4.70921142511728,5.05768642567793,10.066239621087,41.3047584885068,38.9065037459769,40.768992272305,4.77335309007557,0.790839983952838,0.813277868507395,1.18805874903981,1.25452977608681,1.31017538247707,1.61837215661785,3.80205896336545,3.40282724579238,4.01806417204558,8.69875038321696,1.12738587736838,0.448549638131936,1.32366792365678,0.972255941720238,2.19571699912143,1.35164900392623,3.16864544343536,1.95306577265925,2.51662426621706,0.966336483304024,2.59227005632079,7.90027801570446,11.9607877021197,10.4765176308124,8.57477431653447,8.23522800070415,5.96044064343795,8.41368146639782,8.86137163047463,4.74542314756294,5.79171730577999,7.76361625553672,8.67375138583797,8.65906574762965,8.53201385925453,2.49403421976732,1.33191572024439,1.07656627931371,2.01461539636894,4.056981474676,2.62755465631655,4.2124873581471,5.14484109789758,2.50786052017682,0.564751842617067,0.920650473014354,1.71868654031819,2.749650917499,1.37016503954128,0,0,0.900642406448441,2.26571204492102,2.07104124700728,0.207574695168353,0.798049746802062,0.682934423016537,1.21553358534147,0.838452650511929,2.02227859295016,1.11123363900808,1.03017528619447,0.64183841918363,2.02157769411038,1.77435509923168,0.565879024158229,1.49826411951812,1.28050304809739,1.78049953762401,1.42888107384922,2.54945517078682,4.05109362973781,1.64834360321323,1.17759136107518,1.02860775715625,0.70990322463735,0.715308569841963,1.45346416632329,0.941093804153306,2.45382362885862,1.28049581010941,1.05227884575137,2.03706170768793,0.561142271657738,1.77952527186261,2.85662998889134,2.04615521584845,2.16911577660352,1.54325288784913,1.99848462350357,1.63752125911786,3.86767897286937,3.63447830930802,4.41182838239031,2.31867835620421|short_description=p1@Relb}} | ||
|EntrezGene=19698 | |||
|HGNC= | |||
|MCL_coexpression_id=589 | |||
|UniProt=Q8K220,Q04863,Q4U109 | |||
|association_with_transcript=0bp_to_ENSMUST00000049912,ENSMUST00000094762,ENSMUST00000108452,ENSMUST00000131759,ENSMUST00000137615,ENSMUST00000148040,NM_009046,uc009fmo.1,uc009fmp.1_5end | |||
|description=CAGE_peak_1_at_Relb_5end | |||
|id=chr7:20214704..20214800,- | |||
|ontology_enrichment_celltype=CL:0000063!6.00e-12!66;CL:0002320!1.89e-07!46;CL:0000134!1.89e-07!46;CL:0000988!3.58e-07!32;CL:0002032!3.58e-07!32;CL:0000037!3.58e-07!32;CL:0000566!3.58e-07!32;CL:0000837!3.58e-07!32;CL:0000219!8.03e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,5.35e-08,46;CL:0000134,5.35e-08,46;CL:0000988,9.75e-08,32;CL:0002032,9.75e-08,32;CL:0000037,9.75e-08,32;CL:0000837,9.75e-08,32;CL:0000219,2.32e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.84e-17!48;UBERON:0002390!4.27e-15!45;UBERON:0003061!4.27e-15!45;UBERON:0003081!2.09e-12!88;UBERON:0000072!3.03e-09!27;UBERON:0002405!3.47e-09!70;UBERON:0004177!1.79e-08!29;UBERON:0003408!2.99e-08!24;UBERON:0001004!3.25e-08!42;UBERON:0002370!7.26e-08!23;UBERON:0000974!7.26e-08!23;UBERON:0004807!7.26e-08!23;UBERON:0005058!7.26e-08!23;UBERON:0003351!7.26e-08!23;UBERON:0009113!7.26e-08!23;UBERON:0003295!7.26e-08!23;UBERON:0009722!7.26e-08!23;UBERON:0005562!7.26e-08!23;UBERON:0007690!7.26e-08!23;UBERON:0000065!7.39e-08!41;UBERON:0002371!9.56e-08!16;UBERON:0006562!9.57e-08!24;UBERON:0001557!9.57e-08!24;UBERON:0001042!9.57e-08!24;UBERON:0008814!9.57e-08!24;UBERON:0009145!9.57e-08!24;UBERON:0002384!1.89e-07!46;UBERON:0000926!5.53e-07!193;UBERON:0004120!5.53e-07!193;UBERON:0006603!5.53e-07!193;UBERON:0002204!5.96e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.23e-17,48;UBERON:0002405,3.23e-17,48;UBERON:0002390,1.68e-15,45;UBERON:0003061,1.68e-15,45;UBERON:0003081,9.32e-12,87;UBERON:0000072,1.48e-09,27;UBERON:0000077,1.96e-09,35;UBERON:0000926,2.29e-09,120;UBERON:0004120,2.29e-09,120;UBERON:0006603,2.29e-09,120;UBERON:0004177,9.35e-09,29;UBERON:0005057,9.35e-09,29;UBERON:0003408,1.52e-08,24;UBERON:0002370,3.76e-08,23;UBERON:0000974,3.76e-08,23;UBERON:0004807,3.76e-08,23;UBERON:0005058,3.76e-08,23;UBERON:0003351,3.76e-08,23;UBERON:0009113,3.76e-08,23;UBERON:0003295,3.76e-08,23;UBERON:0009722,3.76e-08,23;UBERON:0005562,3.76e-08,23;UBERON:0007690,3.76e-08,23;UBERON:0001004,4.48e-08,42;UBERON:0006562,5.04e-08,24;UBERON:0001557,5.04e-08,24;UBERON:0001042,5.04e-08,24;UBERON:0008814,5.04e-08,24;UBERON:0009145,5.04e-08,24;UBERON:0002384,5.35e-08,46;UBERON:0002371,7.72e-08,16;UBERON:0000065,1.02e-07,41;UBERON:0004119,7.29e-07,118;UBERON:0000925,7.29e-07,118;UBERON:0006595,7.29e-07,118;UBERON:0002204,8.81e-07,32;UBERON:0001007,8.99e-07,116;UBERON:0001555,8.99e-07,116;UBERON:0007026,8.99e-07,116 | |||
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| |||
|short_description=p1@Relb | |||
}} |
Revision as of 12:43, 14 September 2013
Short description: | p1@Relb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Relb_5end |
Coexpression cluster: | MCL_coexpression_mm9:589 |
Association with transcript: | 0bp_to_ENSMUST00000049912, ENSMUST00000094762, ENSMUST00000108452, ENSMUST00000131759, ENSMUST00000137615, ENSMUST00000148040, NM_009046, uc009fmo.1, uc009fmp.1_5end |
EntrezGene: | Relb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 5.35e-08 | 46 |
mesenchymal cell | 5.35e-08 | 46 |
hematopoietic cell | 9.75e-08 | 32 |
hematopoietic oligopotent progenitor cell | 9.75e-08 | 32 |
hematopoietic stem cell | 9.75e-08 | 32 |
hematopoietic multipotent progenitor cell | 9.75e-08 | 32 |
motile cell | 2.32e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.