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FFCP PHASE1:Mm9::chr2:60511711..60511788,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16420|HGNC=|MCL_coexpression_id=661|UniProt=Q9Z0T9,B1AYG7,B1AYG5,Q9D2L4|association_with_transcript=0bp_to_ENSMUST00000059888,ENSMUST00000133887,ENSMUST00000145009,ENSMUST00000154764,NM_021359,uc008juj.2,uc008jun.2_5end|description=CAGE_peak_1_at_Itgb6_5end|id=chr2:60511711..60511788,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.59e-18!59;UBERON:0000160!6.06e-18!43;UBERON:0004119!4.69e-15!130;UBERON:0000925!4.69e-15!130;UBERON:0006595!4.69e-15!130;UBERON:0001007!1.21e-14!128;UBERON:0001555!1.21e-14!128;UBERON:0007026!1.21e-14!128;UBERON:0004921!1.83e-13!126;UBERON:0004185!1.83e-13!126;UBERON:0005178!4.09e-10!17;UBERON:0005181!4.09e-10!17;UBERON:0002224!4.09e-10!17;UBERON:0000915!4.09e-10!17;UBERON:0008947!4.09e-10!17;UBERON:0003258!4.09e-10!17;UBERON:0000344!3.60e-09!15;UBERON:0005153!3.10e-08!17;UBERON:0002048!5.31e-08!14;UBERON:0000117!5.31e-08!14;UBERON:0000171!5.31e-08!14;UBERON:0000170!5.31e-08!14;UBERON:0005597!5.31e-08!14;UBERON:0000118!5.31e-08!14;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.08e-17,47;UBERON:0000160,3.82e-17,31;UBERON:0004119,7.77e-12,118;UBERON:0000925,7.77e-12,118;UBERON:0006595,7.77e-12,118;UBERON:0001007,1.92e-11,116;UBERON:0001555,1.92e-11,116;UBERON:0007026,1.92e-11,116;UBERON:0005178,1.59e-10,17;UBERON:0005181,1.59e-10,17;UBERON:0002224,1.59e-10,17;UBERON:0000915,1.59e-10,17;UBERON:0008947,1.59e-10,17;UBERON:0003258,1.59e-10,17;UBERON:0004921,2.49e-10,114;UBERON:0000344,4.31e-10,15;UBERON:0005153,1.72e-08,17;UBERON:0001242,1.94e-08,13;UBERON:0001262,1.94e-08,13;UBERON:0004786,1.94e-08,13;UBERON:0002048,3.45e-08,14;UBERON:0000117,3.45e-08,14;UBERON:0000171,3.45e-08,14;UBERON:0000170,3.45e-08,14;UBERON:0005597,3.45e-08,14;UBERON:0000118,3.45e-08,14;UBERON:0000485,9.17e-07,11;UBERON:0004923,9.34e-07,24|phase1_expression=10.089377367602,48.5075816618712,52.7799117691862,6.35174843744343,5.50985302940982,36.2619227329682,32.7057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,79.3562417055297,104.381222885562,52.2551087344668,70.6449673700883,71.1055067863434,42.7552693776841,25.2030129759931,112.639099412895,0,0,0,13.2871745085586,12.4675984018869,12.6585000882669,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,10.7249860819621,0,0,0,0,0,4.63466586434781,0,0,0,43.661460130771,0,0,0,69.4936241645997,76.5146793734798,58.6408356217149,8.79215873836762,0,0,0.173485326766136,0,0,0,0,0.125666591329675,26.449861547578,0,0,0,0,0,41.0061874679869,0,0,29.8884754594052,0,0,0,0,0,0,0.173824320192276,0,0,0,2.13862664085664,0.995255764880744,7.07623723614289,14.7309299120532,0.130120442962704,0,0.720248519221397,0.753524089178575,0.476255494059295,0.640568601424249,0.562210347358373,2.58703370739016,0.215567992932842,1.13463648100692,0.703804496655795,0.43839146485515,1.66828349535359,3.48252166522167,4.11564272815887,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,43.6152793538613,9.78467096655114,1.2797295032114,4.87697010906921,9.27845721519072,20.3700359869576,22.4601824283319,26.4413620296457,15.1849299694244,27.5047254389098,30.9142306824331,34.2205131910779,34.8985715943225,33.2563181202062,21.3976669375947,19.7149860521824,1.70701110857774,1.94222471436539,6.76246414038483,5.29493452397817,4.07300223052014,3.50679099451593,16.7576823379282,18.1560482014911,22.9218142648407,15.9182341459123,0,0,0.196558995113203,0.224862112384854,0,0,1.01850340712568,2.01387296215567,0,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0,0.358794827043824,0,43.9712592596519,0.37898282354097,5.21487924614483,7.29903868833309,10.7957514212711,37.3538954095249,36.1826334146741,31.2213836572478,56.7486518782288,64.2247599981447,64.7386360749398,32.1172096842846,68.2105678370288,62.777691424376,0,0,5.90117127622843,4.96686143348518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39372323791421,0.35613120733451,0.488660878060728,10.0631775013247,2.65490276679926,2.91336763385978,6.95344181018927,5.84675747243284,3.2483208216885,6.14870295887855,7.23599220871019,5.45300594216258,9.26893183800275,7.9009189483954,9.48767477174989,10.3135543248187,1.70219802876894,1.98067203434441,1.68166288917581,2.35770738534752,2.83744373827638,1.07021290561242,1.48094118541909,0.608929898229199,2.11204537257339,5.93129798418696,3.08739757276947,14.0153315000258,9.52640117505843,15.8019863311768,18.1445962884767,18.2196398717018,34.9777003955821,0,0,1.44470807574256,0,0,0,0,0,0,0,25.7761066864081,1.26534397432454,11.7925290933572,18.9009346438152,21.5360944894903,18.5608179184251,20.3645163041079,30.8297389855503,42.6662185433968,34.6071978689087,59.0272347432579,0,0,0.165458490457098,0,0,0,0.117357238645754,1.0416350787516,0,0,0.288030006257865,0,0,0,0,0.358053391334963,0.198681354781265,0.480781798079875,0,0.302899349844443,0.0762068066549998,0,0.194915761479505,0.288635524920988,0,8.16229381014761,0,0,0.167884616364078,29.7511974809573,2.81523713176773,26.0075306459516,39.6581501296272,9.02829787263654,0,0,0,0,0,0,0.675022500231806,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.21553358534147,0.628839487883947,1.2869045591501,8.44537565646138,3.91466608753899,5.45562656306086,2.27427490587418,5.0695859978048,3.77252682772152,6.46126401542189,5.18603734479441,4.70970845436029,4.76293691283074,3.47652977834566,5.20854895252004,3.70877310722976,4.41596760403192,3.77156177623957,4.08194354166476,5.96090474868302,6.1045494985578,5.74067220533517,6.59993941555077,4.75612729469209,3.94604567156764,5.83957689537206,3.92799590160417,3.91495559809775,4.62971067165148,2.04615521584845,4.95797891795091,4.05103883060397,0.749431733813838,2.10538447600868,4.94203424311086,0.956441660344217,1.32354851471709,1.15933917810211|short_description=p1@Itgb6}}
|EntrezGene=16420
|HGNC=
|MCL_coexpression_id=661
|UniProt=Q9Z0T9,B1AYG7,B1AYG5,Q9D2L4
|association_with_transcript=0bp_to_ENSMUST00000059888,ENSMUST00000133887,ENSMUST00000145009,ENSMUST00000154764,NM_021359,uc008juj.2,uc008jun.2_5end
|description=CAGE_peak_1_at_Itgb6_5end
|id=chr2:60511711..60511788,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!2.59e-18!59;UBERON:0000160!6.06e-18!43;UBERON:0004119!4.69e-15!130;UBERON:0000925!4.69e-15!130;UBERON:0006595!4.69e-15!130;UBERON:0001007!1.21e-14!128;UBERON:0001555!1.21e-14!128;UBERON:0007026!1.21e-14!128;UBERON:0004921!1.83e-13!126;UBERON:0004185!1.83e-13!126;UBERON:0005178!4.09e-10!17;UBERON:0005181!4.09e-10!17;UBERON:0002224!4.09e-10!17;UBERON:0000915!4.09e-10!17;UBERON:0008947!4.09e-10!17;UBERON:0003258!4.09e-10!17;UBERON:0000344!3.60e-09!15;UBERON:0005153!3.10e-08!17;UBERON:0002048!5.31e-08!14;UBERON:0000117!5.31e-08!14;UBERON:0000171!5.31e-08!14;UBERON:0000170!5.31e-08!14;UBERON:0005597!5.31e-08!14;UBERON:0000118!5.31e-08!14;UBERON:0001242!1.08e-07!13;UBERON:0000060!1.08e-07!13;UBERON:0001262!1.08e-07!13;UBERON:0004786!1.08e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.08e-17,47;UBERON:0000160,3.82e-17,31;UBERON:0004119,7.77e-12,118;UBERON:0000925,7.77e-12,118;UBERON:0006595,7.77e-12,118;UBERON:0001007,1.92e-11,116;UBERON:0001555,1.92e-11,116;UBERON:0007026,1.92e-11,116;UBERON:0005178,1.59e-10,17;UBERON:0005181,1.59e-10,17;UBERON:0002224,1.59e-10,17;UBERON:0000915,1.59e-10,17;UBERON:0008947,1.59e-10,17;UBERON:0003258,1.59e-10,17;UBERON:0004921,2.49e-10,114;UBERON:0000344,4.31e-10,15;UBERON:0005153,1.72e-08,17;UBERON:0001242,1.94e-08,13;UBERON:0001262,1.94e-08,13;UBERON:0004786,1.94e-08,13;UBERON:0002048,3.45e-08,14;UBERON:0000117,3.45e-08,14;UBERON:0000171,3.45e-08,14;UBERON:0000170,3.45e-08,14;UBERON:0005597,3.45e-08,14;UBERON:0000118,3.45e-08,14;UBERON:0000485,9.17e-07,11;UBERON:0004923,9.34e-07,24
|phase1_expression=10.089377367602,48.5075816618712,52.7799117691862,6.35174843744343,5.50985302940982,36.2619227329682,32.7057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,79.3562417055297,104.381222885562,52.2551087344668,70.6449673700883,71.1055067863434,42.7552693776841,25.2030129759931,112.639099412895,0,0,0,13.2871745085586,12.4675984018869,12.6585000882669,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,10.7249860819621,0,0,0,0,0,4.63466586434781,0,0,0,43.661460130771,0,0,0,69.4936241645997,76.5146793734798,58.6408356217149,8.79215873836762,0,0,0.173485326766136,0,0,0,0,0.125666591329675,26.449861547578,0,0,0,0,0,41.0061874679869,0,0,29.8884754594052,0,0,0,0,0,0,0.173824320192276,0,0,0,2.13862664085664,0.995255764880744,7.07623723614289,14.7309299120532,0.130120442962704,0,0.720248519221397,0.753524089178575,0.476255494059295,0.640568601424249,0.562210347358373,2.58703370739016,0.215567992932842,1.13463648100692,0.703804496655795,0.43839146485515,1.66828349535359,3.48252166522167,4.11564272815887,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0,43.6152793538613,9.78467096655114,1.2797295032114,4.87697010906921,9.27845721519072,20.3700359869576,22.4601824283319,26.4413620296457,15.1849299694244,27.5047254389098,30.9142306824331,34.2205131910779,34.8985715943225,33.2563181202062,21.3976669375947,19.7149860521824,1.70701110857774,1.94222471436539,6.76246414038483,5.29493452397817,4.07300223052014,3.50679099451593,16.7576823379282,18.1560482014911,22.9218142648407,15.9182341459123,0,0,0.196558995113203,0.224862112384854,0,0,1.01850340712568,2.01387296215567,0,0.274561413188081,2.87536413054709,0.744281895337007,0.624075346229121,0,0.358794827043824,0,43.9712592596519,0.37898282354097,5.21487924614483,7.29903868833309,10.7957514212711,37.3538954095249,36.1826334146741,31.2213836572478,56.7486518782288,64.2247599981447,64.7386360749398,32.1172096842846,68.2105678370288,62.777691424376,0,0,5.90117127622843,4.96686143348518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39372323791421,0.35613120733451,0.488660878060728,10.0631775013247,2.65490276679926,2.91336763385978,6.95344181018927,5.84675747243284,3.2483208216885,6.14870295887855,7.23599220871019,5.45300594216258,9.26893183800275,7.9009189483954,9.48767477174989,10.3135543248187,1.70219802876894,1.98067203434441,1.68166288917581,2.35770738534752,2.83744373827638,1.07021290561242,1.48094118541909,0.608929898229199,2.11204537257339,5.93129798418696,3.08739757276947,14.0153315000258,9.52640117505843,15.8019863311768,18.1445962884767,18.2196398717018,34.9777003955821,0,0,1.44470807574256,0,0,0,0,0,0,0,25.7761066864081,1.26534397432454,11.7925290933572,18.9009346438152,21.5360944894903,18.5608179184251,20.3645163041079,30.8297389855503,42.6662185433968,34.6071978689087,59.0272347432579,0,0,0.165458490457098,0,0,0,0.117357238645754,1.0416350787516,0,0,0.288030006257865,0,0,0,0,0.358053391334963,0.198681354781265,0.480781798079875,0,0.302899349844443,0.0762068066549998,0,0.194915761479505,0.288635524920988,0,8.16229381014761,0,0,0.167884616364078,29.7511974809573,2.81523713176773,26.0075306459516,39.6581501296272,9.02829787263654,0,0,0,0,0,0,0.675022500231806,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.21553358534147,0.628839487883947,1.2869045591501,8.44537565646138,3.91466608753899,5.45562656306086,2.27427490587418,5.0695859978048,3.77252682772152,6.46126401542189,5.18603734479441,4.70970845436029,4.76293691283074,3.47652977834566,5.20854895252004,3.70877310722976,4.41596760403192,3.77156177623957,4.08194354166476,5.96090474868302,6.1045494985578,5.74067220533517,6.59993941555077,4.75612729469209,3.94604567156764,5.83957689537206,3.92799590160417,3.91495559809775,4.62971067165148,2.04615521584845,4.95797891795091,4.05103883060397,0.749431733813838,2.10538447600868,4.94203424311086,0.956441660344217,1.32354851471709,1.15933917810211
|short_description=p1@Itgb6
}}

Revision as of 00:13, 14 September 2013

Short description:p1@Itgb6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Itgb6_5end
Coexpression cluster:MCL_coexpression_mm9:661
Association with transcript: 0bp_to_ENSMUST00000059888, ENSMUST00000133887, ENSMUST00000145009, ENSMUST00000154764, NM_021359, uc008juj.2, uc008jun.2_5end
EntrezGene:Itgb6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Itgb6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I548.51
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I652.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I736.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D179.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2104.38
GP2+ M cell, pool1.CNhs13228.11845-124H952.26
GP2+ M cell, pool2.CNhs13231.11846-124I170.64
GP2+ M cell, pool3.CNhs13240.11847-124I271.11
Ileum epithelium, pool1.CNhs13199.10252-104B942.76
Ileum epithelium, pool2.CNhs13232.10253-104C125.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8112.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G169.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G276.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G358.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.79
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A826.45
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H729.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I343.62
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H420.37
intestine, embryo E17.CNhs10582.482-18D322.46
intestine, embryo E18.CNhs10526.1289-20F726.44
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E927.50
intestine, neonate N06.CNhs11102.688-20B830.91
intestine, neonate N07.CNhs11095.720-20F234.22
intestine, neonate N10.CNhs11098.755-23A534.90
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E321.40
intestine, neonate N30.CNhs11131.1384-42G119.71
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D516.76
kidney, neonate N20.CNhs11113.832-19I118.16
kidney, neonate N25.CNhs11122.1353-25F322.92
kidney, neonate N30.CNhs11203.1385-42H115.92
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B143.97
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A637.35
lung, embryo E18.CNhs10583.1287-20I636.18
lung, neonate N00.CNhs11224.640-42C631.22
lung, neonate N06.CNhs11212.683-20E556.75
lung, neonate N07.CNhs11111.715-19A364.22
lung, neonate N10.CNhs11219.750-23E664.74
lung, neonate N20.CNhs11109.822-18A432.12
lung, neonate N25.CNhs11119.1359-25C768.21
lung, neonate N30.CNhs11133.1394-42H262.78
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G610.06
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C314.02
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H315.80
skin, neonate N06.CNhs11097.693-20I518.14
skin, neonate N10.CNhs11108.762-6C418.22
small intestine, neonate N16.CNhs11114.790-21I134.98
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H625.78
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G811.79
stomach, embryo E16.CNhs11022.459-17D418.90
stomach, embryo E17.CNhs11006.1035-18D521.54
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B820.36
stomach, neonate N07.CNhs11210.718-18A930.83
stomach, neonate N25.CNhs11104.1355-25E442.67
stomach, neonate N30.CNhs11134.1386-42I134.61
submandibular gland, adult.CNhs10469.59-29C159.03
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E429.75
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E526.01
vagina, adult.CNhs10502.89-27D539.66
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.08e-1747
intestine3.82e-1731
endoderm-derived structure7.77e-12118
endoderm7.77e-12118
presumptive endoderm7.77e-12118
digestive system1.92e-11116
digestive tract1.92e-11116
primitive gut1.92e-11116
thoracic cavity element1.59e-1017
thoracic segment organ1.59e-1017
thoracic cavity1.59e-1017
thoracic segment of trunk1.59e-1017
respiratory primordium1.59e-1017
endoderm of foregut1.59e-1017
subdivision of digestive tract2.49e-10114
mucosa4.31e-1015
epithelial bud1.72e-0817
intestinal mucosa1.94e-0813
wall of intestine1.94e-0813
gastrointestinal system mucosa1.94e-0813
lung3.45e-0814
respiratory tube3.45e-0814
respiration organ3.45e-0814
pair of lungs3.45e-0814
lung primordium3.45e-0814
lung bud3.45e-0814
simple columnar epithelium9.17e-0711
organ component layer9.34e-0724







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