FFCP PHASE1:Mm9::chr1:136605870..136605895,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20980|HGNC=|MCL_coexpression_id=742|UniProt=P46097|association_with_transcript=0bp_to_ENSMUST00000121990,uc007csk.1_5end|description=CAGE_peak_4_at_Syt2_5end|id=chr1:136605870..136605895,+|ontology_enrichment_celltype=CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.75e-17,23;CL:0000337,2.75e-17,23;CL:0000540,2.60e-11,33;CL:0000047,2.60e-11,33;CL:0000031,2.60e-11,33;CL:0000404,2.60e-11,33;CL:0002612,3.98e-10,3;CL:0002610,5.65e-10,3;CL:0002614,6.06e-10,3;CL:0000393,3.35e-09,39;CL:0000211,3.35e-09,39;CL:0002319,3.99e-08,43;CL:0000221,6.91e-08,44;CL:0000133,6.91e-08,44;CL:0002611,1.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.32e-19!52;UBERON:0005068!4.32e-19!52;UBERON:0006241!4.32e-19!52;UBERON:0007135!4.32e-19!52;UBERON:0002346!1.39e-16!71;UBERON:0003075!1.39e-16!71;UBERON:0007284!1.39e-16!71;UBERON:0002616!2.28e-16!49;UBERON:0000955!8.96e-16!50;UBERON:0006238!8.96e-16!50;UBERON:0000033!1.91e-14!63;UBERON:0000073!2.30e-14!75;UBERON:0001016!2.30e-14!75;UBERON:0001017!2.73e-14!73;UBERON:0005743!2.73e-14!73;UBERON:0002020!2.75e-14!34;UBERON:0003080!1.03e-11!40;UBERON:0004121!1.10e-11!102;UBERON:0000924!1.10e-11!102;UBERON:0006601!1.10e-11!102;UBERON:0002780!6.21e-11!39;UBERON:0001890!6.21e-11!39;UBERON:0006240!6.21e-11!39;UBERON:0003056!7.34e-11!49;UBERON:0002791!4.73e-10!29;UBERON:0003528!4.73e-10!29;UBERON:0001893!4.73e-10!29;UBERON:0007811!1.71e-09!86;UBERON:0003076!8.18e-09!12;UBERON:0003057!8.18e-09!12;UBERON:0000153!4.81e-08!94;UBERON:0002240!2.44e-07!6;UBERON:0005174!2.44e-07!6;UBERON:0001137!2.44e-07!6;UBERON:0002298!3.31e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.82e-31,54;UBERON:0001049,6.28e-27,52;UBERON:0005068,6.28e-27,52;UBERON:0006241,6.28e-27,52;UBERON:0007135,6.28e-27,52;UBERON:0001017,6.95e-26,73;UBERON:0003076,9.32e-26,12;UBERON:0003057,9.32e-26,12;UBERON:0001016,4.65e-25,75;UBERON:0002346,5.29e-21,64;UBERON:0003075,5.29e-21,64;UBERON:0007284,5.29e-21,64;UBERON:0002020,2.71e-19,34;UBERON:0002240,4.46e-19,6;UBERON:0005174,4.46e-19,6;UBERON:0001137,4.46e-19,6;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0010371,7.81e-18,73;UBERON:0001948,3.77e-16,5;UBERON:0002315,3.77e-16,5;UBERON:0002616,1.67e-15,46;UBERON:0000955,4.24e-15,47;UBERON:0006238,4.24e-15,47;UBERON:0010314,3.57e-13,92;UBERON:0002950,7.83e-13,4;UBERON:0001891,7.83e-13,4;UBERON:0009616,7.83e-13,4;UBERON:0010286,7.83e-13,4;UBERON:0002257,3.98e-10,3;UBERON:0003528,4.85e-10,29;UBERON:0002791,4.85e-10,29;UBERON:0001893,4.85e-10,29;UBERON:0004684,5.65e-10,3;UBERON:0002275,5.65e-10,3;UBERON:0002038,6.06e-10,3;UBERON:0009663,6.06e-10,3;UBERON:0009661,6.06e-10,3;UBERON:0000125,6.06e-10,3;UBERON:0002308,6.06e-10,3;UBERON:0003080,8.25e-10,40;UBERON:0000025,1.03e-09,114;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0004733,3.77e-09,6;UBERON:0004732,3.77e-09,6;UBERON:0002028,3.77e-09,6;UBERON:0007277,3.77e-09,6;UBERON:0004111,9.13e-09,122;UBERON:0002780,1.97e-08,39;UBERON:0001890,1.97e-08,39;UBERON:0006240,1.97e-08,39;UBERON:0002256,1.15e-07,2;UBERON:0003056,1.51e-07,49;UBERON:0001896,1.78e-07,2;UBERON:0002298,1.78e-07,2;UBERON:0005290,1.78e-07,2;UBERON:0010096,1.78e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,16.2821061110168,10.1599528837742,0.489963196859816,0.0958454710182364,0,8.8092704799511,6.12899222808901,6.75868746327471,0.395658863190582,0.823388792421687,0,10.8881369610539,2.8138130501584,3.51435969886663,8.54422897873636,10.5355043791336,3.72798891650601,0,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,19.3235326027621,21.154117388159,0,0,0,0,9.43681028250383,2.74500361691176,0.251308704225729,2.08589184230732,2.81287003063364,4.57133698031032,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,10.2752377592187,8.90808818100744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,9.82754100655701,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.324016022465404,0,0,0,0,0,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.516639293910924,1.01373675294467,0.821500670520278,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.89038500578056,1.37016503954128,0,0.675022500231806,1.35096360967266,1.81256963593682,2.5888015587591,0.31136204275253,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0|short_description=p4@Syt2}} | ||
|EntrezGene=20980 | |||
|HGNC= | |||
|MCL_coexpression_id=742 | |||
|UniProt=P46097 | |||
|association_with_transcript=0bp_to_ENSMUST00000121990,uc007csk.1_5end | |||
|description=CAGE_peak_4_at_Syt2_5end | |||
|id=chr1:136605870..136605895,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.75e-17,23;CL:0000337,2.75e-17,23;CL:0000540,2.60e-11,33;CL:0000047,2.60e-11,33;CL:0000031,2.60e-11,33;CL:0000404,2.60e-11,33;CL:0002612,3.98e-10,3;CL:0002610,5.65e-10,3;CL:0002614,6.06e-10,3;CL:0000393,3.35e-09,39;CL:0000211,3.35e-09,39;CL:0002319,3.99e-08,43;CL:0000221,6.91e-08,44;CL:0000133,6.91e-08,44;CL:0002611,1.15e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.32e-19!52;UBERON:0005068!4.32e-19!52;UBERON:0006241!4.32e-19!52;UBERON:0007135!4.32e-19!52;UBERON:0002346!1.39e-16!71;UBERON:0003075!1.39e-16!71;UBERON:0007284!1.39e-16!71;UBERON:0002616!2.28e-16!49;UBERON:0000955!8.96e-16!50;UBERON:0006238!8.96e-16!50;UBERON:0000033!1.91e-14!63;UBERON:0000073!2.30e-14!75;UBERON:0001016!2.30e-14!75;UBERON:0001017!2.73e-14!73;UBERON:0005743!2.73e-14!73;UBERON:0002020!2.75e-14!34;UBERON:0003080!1.03e-11!40;UBERON:0004121!1.10e-11!102;UBERON:0000924!1.10e-11!102;UBERON:0006601!1.10e-11!102;UBERON:0002780!6.21e-11!39;UBERON:0001890!6.21e-11!39;UBERON:0006240!6.21e-11!39;UBERON:0003056!7.34e-11!49;UBERON:0002791!4.73e-10!29;UBERON:0003528!4.73e-10!29;UBERON:0001893!4.73e-10!29;UBERON:0007811!1.71e-09!86;UBERON:0003076!8.18e-09!12;UBERON:0003057!8.18e-09!12;UBERON:0000153!4.81e-08!94;UBERON:0002240!2.44e-07!6;UBERON:0005174!2.44e-07!6;UBERON:0001137!2.44e-07!6;UBERON:0002298!3.31e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.82e-31,54;UBERON:0001049,6.28e-27,52;UBERON:0005068,6.28e-27,52;UBERON:0006241,6.28e-27,52;UBERON:0007135,6.28e-27,52;UBERON:0001017,6.95e-26,73;UBERON:0003076,9.32e-26,12;UBERON:0003057,9.32e-26,12;UBERON:0001016,4.65e-25,75;UBERON:0002346,5.29e-21,64;UBERON:0003075,5.29e-21,64;UBERON:0007284,5.29e-21,64;UBERON:0002020,2.71e-19,34;UBERON:0002240,4.46e-19,6;UBERON:0005174,4.46e-19,6;UBERON:0001137,4.46e-19,6;UBERON:0004121,1.04e-18,95;UBERON:0000924,1.04e-18,95;UBERON:0006601,1.04e-18,95;UBERON:0010371,7.81e-18,73;UBERON:0001948,3.77e-16,5;UBERON:0002315,3.77e-16,5;UBERON:0002616,1.67e-15,46;UBERON:0000955,4.24e-15,47;UBERON:0006238,4.24e-15,47;UBERON:0010314,3.57e-13,92;UBERON:0002950,7.83e-13,4;UBERON:0001891,7.83e-13,4;UBERON:0009616,7.83e-13,4;UBERON:0010286,7.83e-13,4;UBERON:0002257,3.98e-10,3;UBERON:0003528,4.85e-10,29;UBERON:0002791,4.85e-10,29;UBERON:0001893,4.85e-10,29;UBERON:0004684,5.65e-10,3;UBERON:0002275,5.65e-10,3;UBERON:0002038,6.06e-10,3;UBERON:0009663,6.06e-10,3;UBERON:0009661,6.06e-10,3;UBERON:0000125,6.06e-10,3;UBERON:0002308,6.06e-10,3;UBERON:0003080,8.25e-10,40;UBERON:0000025,1.03e-09,114;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0004733,3.77e-09,6;UBERON:0004732,3.77e-09,6;UBERON:0002028,3.77e-09,6;UBERON:0007277,3.77e-09,6;UBERON:0004111,9.13e-09,122;UBERON:0002780,1.97e-08,39;UBERON:0001890,1.97e-08,39;UBERON:0006240,1.97e-08,39;UBERON:0002256,1.15e-07,2;UBERON:0003056,1.51e-07,49;UBERON:0001896,1.78e-07,2;UBERON:0002298,1.78e-07,2;UBERON:0005290,1.78e-07,2;UBERON:0010096,1.78e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,16.2821061110168,10.1599528837742,0.489963196859816,0.0958454710182364,0,8.8092704799511,6.12899222808901,6.75868746327471,0.395658863190582,0.823388792421687,0,10.8881369610539,2.8138130501584,3.51435969886663,8.54422897873636,10.5355043791336,3.72798891650601,0,0.302286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,19.3235326027621,21.154117388159,0,0,0,0,9.43681028250383,2.74500361691176,0.251308704225729,2.08589184230732,2.81287003063364,4.57133698031032,0.973447578406546,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,10.2752377592187,8.90808818100744,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,9.82754100655701,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.324016022465404,0,0,0,0,0,0,0,0,0.448549638131936,0.330916980914195,0.388902376688095,0.516639293910924,1.01373675294467,0.821500670520278,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.89038500578056,1.37016503954128,0,0.675022500231806,1.35096360967266,1.81256963593682,2.5888015587591,0.31136204275253,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0 | |||
|short_description=p4@Syt2 | |||
}} |
Revision as of 18:58, 13 September 2013
Short description: | p4@Syt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:742 |
Association with transcript: | 0bp_to_ENSMUST00000121990, uc007csk.1_5end |
EntrezGene: | Syt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.75e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.75e-17 | 23 |
neuron | 2.60e-11 | 33 |
neuronal stem cell | 2.60e-11 | 33 |
neuroblast | 2.60e-11 | 33 |
electrically signaling cell | 2.60e-11 | 33 |
neuron of the ventral spinal cord | 3.98e-10 | 3 |
raphe nuclei neuron | 5.65e-10 | 3 |
neuron of the substantia nigra | 6.06e-10 | 3 |
electrically responsive cell | 3.35e-09 | 39 |
electrically active cell | 3.35e-09 | 39 |
neural cell | 3.99e-08 | 43 |
ectodermal cell | 6.91e-08 | 44 |
neurectodermal cell | 6.91e-08 | 44 |
neuron of the dorsal spinal cord | 1.15e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.