FFCP PHASE1:Mm9::chr11:3430935..3430962,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=132|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123459_5end|description=CAGE_peak_1_at_ENSMUST00000123459_5end|id=chr11:3430935..3430962,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.20e-11!59;UBERON:0000160!2.87e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.32e-22,47;UBERON:0000160,4.85e-17,31;UBERON:0004921,5.42e-10,114;UBERON:0001007,9.17e-10,116;UBERON:0001555,9.17e-10,116;UBERON:0007026,9.17e-10,116;UBERON:0004119,1.53e-09,118;UBERON:0000925,1.53e-09,118;UBERON:0006595,1.53e-09,118;UBERON:0001155,2.22e-09,2;UBERON:0000059,2.22e-09,2;UBERON:0010147,2.42e-08,2;UBERON:0003937,2.42e-08,2;UBERON:0005399,2.42e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,1.52180500890047,8.0669940462567,0.494096864172033,4.77536896720512,1.59165177632921,4.67913809085888,7.19055526923377,4.53889904736858,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,2.84433082142234,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0,0,0.655087691238533,2.69728692769641,6.28166263512553,7.32916637555283,6.99920855775682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1945581436977,0.187682475451182,1.46521299413812,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.754505365544305,0,0.384150914429216,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0,0,0,0.715308569841963,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p1@ENSMUST00000123459}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123459_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000123459_5end | |||
|id=chr11:3430935..3430962,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.20e-11!59;UBERON:0000160!2.87e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.32e-22,47;UBERON:0000160,4.85e-17,31;UBERON:0004921,5.42e-10,114;UBERON:0001007,9.17e-10,116;UBERON:0001555,9.17e-10,116;UBERON:0007026,9.17e-10,116;UBERON:0004119,1.53e-09,118;UBERON:0000925,1.53e-09,118;UBERON:0006595,1.53e-09,118;UBERON:0001155,2.22e-09,2;UBERON:0000059,2.22e-09,2;UBERON:0010147,2.42e-08,2;UBERON:0003937,2.42e-08,2;UBERON:0005399,2.42e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58670339998127,0,0,0,0.201683524623343,0.22237804384487,1.52180500890047,8.0669940462567,0.494096864172033,4.77536896720512,1.59165177632921,4.67913809085888,7.19055526923377,4.53889904736858,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,2.84433082142234,0,0,0,0,0,0,0,0,0,0,0,0,1.10264199027481,0,0,0,0,0,3.78925087618806,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0,0,0.655087691238533,2.69728692769641,6.28166263512553,7.32916637555283,6.99920855775682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1945581436977,0.187682475451182,1.46521299413812,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.754505365544305,0,0.384150914429216,0.229741875822453,0,0.347652977834566,0,0.412085900803307,0,0,0,0.715308569841963,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p1@ENSMUST00000123459 | |||
}} |
Revision as of 19:33, 12 September 2013
Short description: | p1@ENSMUST00000123459 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000123459_5end |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | 0bp_to_ENSMUST00000123459_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.32e-22 | 47 |
intestine | 4.85e-17 | 31 |
subdivision of digestive tract | 5.42e-10 | 114 |
digestive system | 9.17e-10 | 116 |
digestive tract | 9.17e-10 | 116 |
primitive gut | 9.17e-10 | 116 |
endoderm-derived structure | 1.53e-09 | 118 |
endoderm | 1.53e-09 | 118 |
presumptive endoderm | 1.53e-09 | 118 |
colon | 2.22e-09 | 2 |
large intestine | 2.22e-09 | 2 |
male accessory sex gland | 2.42e-08 | 2 |
sex gland | 2.42e-08 | 2 |
male reproductive gland | 2.42e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.