FFCP PHASE1:Mm9::chr2:28412298..28412344,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=23|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:28412298..28412344,+|id=chr2:28412298..28412344,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.80e-33!59;UBERON:0000160!2.87e-29!43;UBERON:0001045!5.38e-26!13;UBERON:0001264!6.13e-24!12;UBERON:0003922!6.13e-24!12;UBERON:0002114!6.13e-24!12;UBERON:0003923!6.13e-24!12;UBERON:0003924!6.13e-24!12;UBERON:0003921!6.13e-24!12;UBERON:0002108!1.65e-20!16;UBERON:0002075!2.32e-19!19;UBERON:0004921!5.56e-15!126;UBERON:0004185!5.56e-15!126;UBERON:0001007!1.26e-14!128;UBERON:0001555!1.26e-14!128;UBERON:0007026!1.26e-14!128;UBERON:0004119!2.80e-14!130;UBERON:0000925!2.80e-14!130;UBERON:0006595!2.80e-14!130;UBERON:0002323!2.01e-08!37;UBERON:0004458!2.01e-08!37;UBERON:0003886!4.02e-08!38;UBERON:0002553!7.74e-08!39|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.86e-41,12;UBERON:0002075,2.09e-25,19;UBERON:0002323,3.85e-12,37;UBERON:0004458,3.85e-12,37;UBERON:0003886,9.01e-12,38;UBERON:0002553,2.02e-11,39;UBERON:0000160,4.77e-11,31;UBERON:0001155,4.71e-09,2;UBERON:0000059,4.71e-09,2;UBERON:0005409,9.15e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.164698954724011,3.77002813200404,1.39269530428806,1.75467678407208,2.69645822596266,0,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.6117913043755,0,1.81394134178851,4.90373207365335,8.85905678642318,17.8312385807478,5.94385074286909,19.9943551212628,33.5107535681638,46.457403416565,98.0393059747489,83.5397900310313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr2:28412298..28412344,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:28412298..28412344,+ | |||
|id=chr2:28412298..28412344,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.80e-33!59;UBERON:0000160!2.87e-29!43;UBERON:0001045!5.38e-26!13;UBERON:0001264!6.13e-24!12;UBERON:0003922!6.13e-24!12;UBERON:0002114!6.13e-24!12;UBERON:0003923!6.13e-24!12;UBERON:0003924!6.13e-24!12;UBERON:0003921!6.13e-24!12;UBERON:0002108!1.65e-20!16;UBERON:0002075!2.32e-19!19;UBERON:0004921!5.56e-15!126;UBERON:0004185!5.56e-15!126;UBERON:0001007!1.26e-14!128;UBERON:0001555!1.26e-14!128;UBERON:0007026!1.26e-14!128;UBERON:0004119!2.80e-14!130;UBERON:0000925!2.80e-14!130;UBERON:0006595!2.80e-14!130;UBERON:0002323!2.01e-08!37;UBERON:0004458!2.01e-08!37;UBERON:0003886!4.02e-08!38;UBERON:0002553!7.74e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.86e-41,12;UBERON:0002075,2.09e-25,19;UBERON:0002323,3.85e-12,37;UBERON:0004458,3.85e-12,37;UBERON:0003886,9.01e-12,38;UBERON:0002553,2.02e-11,39;UBERON:0000160,4.77e-11,31;UBERON:0001155,4.71e-09,2;UBERON:0000059,4.71e-09,2;UBERON:0005409,9.15e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,11.4955674843866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0,0,0,0,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.164698954724011,3.77002813200404,1.39269530428806,1.75467678407208,2.69645822596266,0,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.6117913043755,0,1.81394134178851,4.90373207365335,8.85905678642318,17.8312385807478,5.94385074286909,19.9943551212628,33.5107535681638,46.457403416565,98.0393059747489,83.5397900310313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr2:28412298..28412344,+ | |||
}} |
Revision as of 23:36, 13 September 2013
Short description: | p@chr2:28412298..28412344, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:28412298..28412344, + |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 2.86e-41 | 12 |
viscus | 2.09e-25 | 19 |
body cavity | 3.85e-12 | 37 |
body cavity or lining | 3.85e-12 | 37 |
body cavity precursor | 9.01e-12 | 38 |
anatomical cavity | 2.02e-11 | 39 |
intestine | 4.77e-11 | 31 |
colon | 4.71e-09 | 2 |
large intestine | 4.71e-09 | 2 |
gastrointestinal system | 9.15e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.