Personal tools

FFCP PHASE1:Mm9::chr3:88259224..88259233,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=20351|HGNC=|UniProt=D3Z336|association_with_transcript=0bp_to_ENSMUST00000125526_5end|description=CAGE_peak_10_at_Sema4a_5end|id=chr3:88259224..88259233,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,7.34e-09,11;CL:0000827,7.34e-09,11;CL:0000838,5.18e-08,12;CL:0000542,2.70e-07,13;CL:0000051,2.70e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.27e-07,3;DOID:4045,4.27e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.79e-09!48;UBERON:0004177!7.01e-09!29;UBERON:0002390!1.79e-08!45;UBERON:0003061!1.79e-08!45;UBERON:0006562!3.04e-07!24;UBERON:0001557!3.04e-07!24;UBERON:0001042!3.04e-07!24;UBERON:0008814!3.04e-07!24;UBERON:0009145!3.04e-07!24;UBERON:0002370!3.51e-07!23;UBERON:0000974!3.51e-07!23;UBERON:0004807!3.51e-07!23;UBERON:0005058!3.51e-07!23;UBERON:0003351!3.51e-07!23;UBERON:0009113!3.51e-07!23;UBERON:0003295!3.51e-07!23;UBERON:0009722!3.51e-07!23;UBERON:0005562!3.51e-07!23;UBERON:0007690!3.51e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.57e-12,23;UBERON:0000974,1.57e-12,23;UBERON:0004807,1.57e-12,23;UBERON:0005058,1.57e-12,23;UBERON:0003351,1.57e-12,23;UBERON:0009113,1.57e-12,23;UBERON:0003295,1.57e-12,23;UBERON:0009722,1.57e-12,23;UBERON:0005562,1.57e-12,23;UBERON:0007690,1.57e-12,23;UBERON:0006562,7.17e-12,24;UBERON:0003408,7.17e-12,24;UBERON:0001557,7.17e-12,24;UBERON:0001042,7.17e-12,24;UBERON:0008814,7.17e-12,24;UBERON:0009145,7.17e-12,24;UBERON:0004177,1.16e-10,29;UBERON:0005057,1.16e-10,29;UBERON:0000072,3.45e-10,27;UBERON:0000077,1.40e-09,35;UBERON:0002193,2.62e-08,48;UBERON:0002405,2.62e-08,48;UBERON:0000490,3.13e-08,66;UBERON:0002390,7.41e-08,45;UBERON:0003061,7.41e-08,45;UBERON:0003929,2.42e-07,55;UBERON:0007811,7.39e-07,36|phase1_expression=0,1.74487703819681,0.454999239389536,1.20985684522732,1.00179145989269,0.16787927191189,0.467225281191051,0.645616617207881,0.84473233291,1.63845168425395,0,0,5.9920255475922,3.4968160967599,0,0.809901069559304,0,0.946386496074713,0.822686601634433,0,0.340173160604279,7.94327609607082,6.00759515019551,0.319984845586813,0.45881856213434,2.29692785646008,0,1.50829862880122,1.33016393619462,1.51218077855958,0.665191531965914,0,0,0,0,0.166234645358492,0,3.76678467663217,3.906676722619,3.14114246384279,5.88231488031014,4.78131839470912,3.88408282424923,0,0,0,0,0,0,0,0,0,0,2.17608642603403,8.4023449785616,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0,0.433798070759735,0,0,0.441683036920787,0.484875253135222,1.86391761218122,0.292780797011547,0,1.53274233125155,0.718890747035522,0.599902730993408,1.65191295194984,0,0,0,0,0,0,0,0,0.995255764880744,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,3.51106593656617,0.257347907114715,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,1.98251269790279,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.627994911365499,0.616985819609003,0,0,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.723245292907558,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,1.54369878638473,0.98931751764888,0.484393280087717,0.542816324353403,0.477489376012546,0.328281799490123,1.7488850197791,0,1.02522528478712,0.619160603889667,0.370389054739423,0.188368457004691,0.546776910884101,0.915112692826091,1.35982743995084,0.559805809294632,0.414599921413271,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,0,1.19613236835183,1.48912641411388,1.16670713006429,0.774958940866387,0.168956125490778,0.234714477291508,0,0,0,0,0.948033361884535,1.41907650703115,2.36235201479103,2.07873316764472,1.43221356533985,1.58945083825012,1.08175904567972,1.18151621739662,0.302899349844443,0.762068066549998,1.00826185136841,1.26695244961678,1.53938946624527,1.5193997283604,0.226730383615211,0,0,0,0,4.87974436173073,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0.463735671240843|short_description=p10@Sema4a}}
|EntrezGene=20351
|HGNC=
|UniProt=D3Z336
|association_with_transcript=0bp_to_ENSMUST00000125526_5end
|description=CAGE_peak_10_at_Sema4a_5end
|id=chr3:88259224..88259233,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000084,7.34e-09,11;CL:0000827,7.34e-09,11;CL:0000838,5.18e-08,12;CL:0000542,2.70e-07,13;CL:0000051,2.70e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,4.27e-07,3;DOID:4045,4.27e-07,3
|ontology_enrichment_uberon=UBERON:0002193!1.79e-09!48;UBERON:0004177!7.01e-09!29;UBERON:0002390!1.79e-08!45;UBERON:0003061!1.79e-08!45;UBERON:0006562!3.04e-07!24;UBERON:0001557!3.04e-07!24;UBERON:0001042!3.04e-07!24;UBERON:0008814!3.04e-07!24;UBERON:0009145!3.04e-07!24;UBERON:0002370!3.51e-07!23;UBERON:0000974!3.51e-07!23;UBERON:0004807!3.51e-07!23;UBERON:0005058!3.51e-07!23;UBERON:0003351!3.51e-07!23;UBERON:0009113!3.51e-07!23;UBERON:0003295!3.51e-07!23;UBERON:0009722!3.51e-07!23;UBERON:0005562!3.51e-07!23;UBERON:0007690!3.51e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.57e-12,23;UBERON:0000974,1.57e-12,23;UBERON:0004807,1.57e-12,23;UBERON:0005058,1.57e-12,23;UBERON:0003351,1.57e-12,23;UBERON:0009113,1.57e-12,23;UBERON:0003295,1.57e-12,23;UBERON:0009722,1.57e-12,23;UBERON:0005562,1.57e-12,23;UBERON:0007690,1.57e-12,23;UBERON:0006562,7.17e-12,24;UBERON:0003408,7.17e-12,24;UBERON:0001557,7.17e-12,24;UBERON:0001042,7.17e-12,24;UBERON:0008814,7.17e-12,24;UBERON:0009145,7.17e-12,24;UBERON:0004177,1.16e-10,29;UBERON:0005057,1.16e-10,29;UBERON:0000072,3.45e-10,27;UBERON:0000077,1.40e-09,35;UBERON:0002193,2.62e-08,48;UBERON:0002405,2.62e-08,48;UBERON:0000490,3.13e-08,66;UBERON:0002390,7.41e-08,45;UBERON:0003061,7.41e-08,45;UBERON:0003929,2.42e-07,55;UBERON:0007811,7.39e-07,36
|phase1_expression=0,1.74487703819681,0.454999239389536,1.20985684522732,1.00179145989269,0.16787927191189,0.467225281191051,0.645616617207881,0.84473233291,1.63845168425395,0,0,5.9920255475922,3.4968160967599,0,0.809901069559304,0,0.946386496074713,0.822686601634433,0,0.340173160604279,7.94327609607082,6.00759515019551,0.319984845586813,0.45881856213434,2.29692785646008,0,1.50829862880122,1.33016393619462,1.51218077855958,0.665191531965914,0,0,0,0,0.166234645358492,0,3.76678467663217,3.906676722619,3.14114246384279,5.88231488031014,4.78131839470912,3.88408282424923,0,0,0,0,0,0,0,0,0,0,2.17608642603403,8.4023449785616,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.69663344023778,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0,0.433798070759735,0,0,0.441683036920787,0.484875253135222,1.86391761218122,0.292780797011547,0,1.53274233125155,0.718890747035522,0.599902730993408,1.65191295194984,0,0,0,0,0,0,0,0,0.995255764880744,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,3.51106593656617,0.257347907114715,2.84163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,1.98251269790279,1.32225283331772,0,0,0,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.627994911365499,0.616985819609003,0,0,0,0.224862112384854,0.202860121388503,0,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.723245292907558,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,1.54369878638473,0.98931751764888,0.484393280087717,0.542816324353403,0.477489376012546,0.328281799490123,1.7488850197791,0,1.02522528478712,0.619160603889667,0.370389054739423,0.188368457004691,0.546776910884101,0.915112692826091,1.35982743995084,0.559805809294632,0.414599921413271,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0.648074866458964,0,0,1.19613236835183,1.48912641411388,1.16670713006429,0.774958940866387,0.168956125490778,0.234714477291508,0,0,0,0,0.948033361884535,1.41907650703115,2.36235201479103,2.07873316764472,1.43221356533985,1.58945083825012,1.08175904567972,1.18151621739662,0.302899349844443,0.762068066549998,1.00826185136841,1.26695244961678,1.53938946624527,1.5193997283604,0.226730383615211,0,0,0,0,4.87974436173073,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0.463735671240843
|short_description=p10@Sema4a
}}

Revision as of 02:46, 14 September 2013

Short description:p10@Sema4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Sema4a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000125526_5end
EntrezGene:Sema4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Sema4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell7.34e-0911
pro-T cell7.34e-0911
lymphoid lineage restricted progenitor cell5.18e-0812
lymphocyte2.70e-0713
common lymphoid progenitor2.70e-0713

Uber anatomy
Ontology termp-valuen
thymus1.57e-1223
neck1.57e-1223
respiratory system epithelium1.57e-1223
hemolymphoid system gland1.57e-1223
pharyngeal epithelium1.57e-1223
thymic region1.57e-1223
pharyngeal gland1.57e-1223
entire pharyngeal arch endoderm1.57e-1223
thymus primordium1.57e-1223
early pharyngeal endoderm1.57e-1223
pharynx7.17e-1224
gland of gut7.17e-1224
upper respiratory tract7.17e-1224
chordate pharynx7.17e-1224
pharyngeal arch system7.17e-1224
pharyngeal region of foregut7.17e-1224
hemopoietic organ1.16e-1029
immune organ1.16e-1029
segment of respiratory tract3.45e-1027
mixed endoderm/mesoderm-derived structure1.40e-0935
hemolymphoid system2.62e-0848
immune system2.62e-0848
unilaminar epithelium3.13e-0866
hematopoietic system7.41e-0845
blood island7.41e-0845
gut epithelium2.42e-0755
craniocervical region7.39e-0736

Disease
Ontology termp-valuen
musculoskeletal system cancer4.27e-073
muscle cancer4.27e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:88259224..88259233,-&oldid=3000297"