FFCP PHASE1:Mm9::chr11:6100414..6100449,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209586|HGNC=|MCL_coexpression_id=33|UniProt=Q8R1N4|association_with_transcript=0bp_to_ENSMUST00000066496_5end|description=CAGE_peak_2_at_Nudcd3_5end|id=chr11:6100414..6100449,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.22e-16!94;UBERON:0007811!1.66e-13!86;UBERON:0002780!4.76e-10!39;UBERON:0001890!4.76e-10!39;UBERON:0006240!4.76e-10!39;UBERON:0003080!7.56e-10!40;UBERON:0001049!1.11e-09!52;UBERON:0005068!1.11e-09!52;UBERON:0006241!1.11e-09!52;UBERON:0007135!1.11e-09!52;UBERON:0001017!2.64e-09!73;UBERON:0005743!2.64e-09!73;UBERON:0002370!2.86e-09!23;UBERON:0000974!2.86e-09!23;UBERON:0004807!2.86e-09!23;UBERON:0005058!2.86e-09!23;UBERON:0003351!2.86e-09!23;UBERON:0009113!2.86e-09!23;UBERON:0003295!2.86e-09!23;UBERON:0009722!2.86e-09!23;UBERON:0005562!2.86e-09!23;UBERON:0007690!2.86e-09!23;UBERON:0006562!3.04e-09!24;UBERON:0001557!3.04e-09!24;UBERON:0001042!3.04e-09!24;UBERON:0008814!3.04e-09!24;UBERON:0009145!3.04e-09!24;UBERON:0000955!3.79e-09!50;UBERON:0006238!3.79e-09!50;UBERON:0002616!8.18e-09!49;UBERON:0000073!1.49e-08!75;UBERON:0001016!1.49e-08!75;UBERON:0000956!3.07e-08!21;UBERON:0001869!3.07e-08!21;UBERON:0000203!3.07e-08!21;UBERON:0000065!3.58e-08!41;UBERON:0003408!4.05e-08!24;UBERON:0004177!4.11e-08!29;UBERON:0002020!5.64e-08!34;UBERON:0002791!7.23e-08!29;UBERON:0003528!7.23e-08!29;UBERON:0001893!7.23e-08!29;UBERON:0002619!1.11e-07!17;UBERON:0001004!2.06e-07!42;UBERON:0000477!2.36e-07!154;UBERON:0000072!5.49e-07!27;UBERON:0003056!5.81e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.75e-10,39;UBERON:0001890,4.75e-10,39;UBERON:0006240,4.75e-10,39;UBERON:0003080,7.55e-10,40;UBERON:0000955,7.70e-10,47;UBERON:0006238,7.70e-10,47;UBERON:0001049,1.11e-09,52;UBERON:0005068,1.11e-09,52;UBERON:0006241,1.11e-09,52;UBERON:0007135,1.11e-09,52;UBERON:0002616,1.70e-09,46;UBERON:0001017,2.58e-09,73;UBERON:0002370,2.67e-09,23;UBERON:0000974,2.67e-09,23;UBERON:0004807,2.67e-09,23;UBERON:0005058,2.67e-09,23;UBERON:0003351,2.67e-09,23;UBERON:0009113,2.67e-09,23;UBERON:0003295,2.67e-09,23;UBERON:0009722,2.67e-09,23;UBERON:0005562,2.67e-09,23;UBERON:0007690,2.67e-09,23;UBERON:0006562,2.84e-09,24;UBERON:0001557,2.84e-09,24;UBERON:0001042,2.84e-09,24;UBERON:0008814,2.84e-09,24;UBERON:0009145,2.84e-09,24;UBERON:0000073,4.19e-09,54;UBERON:0001016,1.46e-08,75;UBERON:0000956,3.07e-08,21;UBERON:0001869,3.07e-08,21;UBERON:0000203,3.07e-08,21;UBERON:0000065,3.40e-08,41;UBERON:0004177,3.88e-08,29;UBERON:0005057,3.88e-08,29;UBERON:0003408,3.95e-08,24;UBERON:0002020,5.64e-08,34;UBERON:0003528,7.23e-08,29;UBERON:0002791,7.23e-08,29;UBERON:0001893,7.23e-08,29;UBERON:0002619,1.11e-07,17;UBERON:0001004,2.02e-07,42;UBERON:0000072,5.20e-07,27;UBERON:0003056,5.81e-07,49;UBERON:0002346,6.06e-07,64;UBERON:0003075,6.06e-07,64;UBERON:0007284,6.06e-07,64|phase1_expression=5.12476310735341,1.74487703819681,2.72999543633722,3.32710632437513,1.50268718983904,3.18970616632591,2.10251376535973,13.5579489613655,9.714421828465,17.3207749478275,11.1291679346578,13.5612670292072,17.462474452983,14.6866276063916,1.33243904726265,2.02475267389826,0,6.78243655520211,5.48457734422955,3.39511721438424,3.99703463710028,5.36171136484781,1.56719873483361,2.23989391910769,1.83527424853736,5.16808767703518,1.29228598847722,1.939241094173,2.66032787238923,2.52030129759931,3.32595765982957,4.44521471421742,4.30545351309199,0,4.33277429626912,2.65975432573588,1.83752420636132,2.51118978442145,2.3440060335714,1.57057123192139,2.35292595212406,0,0.485510353031154,2.51793635951155,2.23029248682932,2.38610777810186,4.69434806608824,3.92445281484804,4.61340983742391,6.41618666945135,3.63964696225943,4.31257693094915,5.20126078778983,7.97898356212479,10.4189077734164,2.31533492432352,3.43840127926508,3.09403255366465,4.65327859977075,4.7609188134483,6.97214543856797,4.06613438482959,6.22506357277798,2.6996991518442,1.97773272513395,3.5524005747305,5.09320187881288,1.92109152660777,4.97710139080693,6.21027316325777,3.36519938162211,5.14171771926846,4.8591079009355,8.69684674426174,6.22995561618536,6.43453150627015,0,4.46905683298157,4.14737639791857,3.82470234417562,5.30628332893976,5.2091337055676,3.90856198601933,1.68828783009504,2.59757021220577,3.53554302568401,3.27454865837937,5.40558392893372,3.18050011999373,1.73814588245607,7.8263411949453,1.72084775396277,2.03991400112325,1.07940638327563,0,1.79210754838934,2.94933282276679,1.87473354835864,1.55871602761721,0.70667914902068,2.25349471642689,1.28326477414318,0,0,1.94841936910093,2.78695852022608,2.02209778005913,2.74041311325744,8.54495016035667,2.07818994690755,4.16364784238726,3.04465478312141,4.15107895060905,3.91878865436819,4.58595957829249,2.89033160058254,1.97755974187499,2.02439099687876,1.76922110389975,3.558870698843,2.42925670306433,6.30337829075789,3.72783522436244,2.92780797011547,4.60782754989601,2.55457055208591,8.74650408893218,5.999027309934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| ||
|EntrezGene=209586 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=Q8R1N4 | |||
|association_with_transcript=0bp_to_ENSMUST00000066496_5end | |||
|description=CAGE_peak_2_at_Nudcd3_5end | |||
|id=chr11:6100414..6100449,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.22e-16!94;UBERON:0007811!1.66e-13!86;UBERON:0002780!4.76e-10!39;UBERON:0001890!4.76e-10!39;UBERON:0006240!4.76e-10!39;UBERON:0003080!7.56e-10!40;UBERON:0001049!1.11e-09!52;UBERON:0005068!1.11e-09!52;UBERON:0006241!1.11e-09!52;UBERON:0007135!1.11e-09!52;UBERON:0001017!2.64e-09!73;UBERON:0005743!2.64e-09!73;UBERON:0002370!2.86e-09!23;UBERON:0000974!2.86e-09!23;UBERON:0004807!2.86e-09!23;UBERON:0005058!2.86e-09!23;UBERON:0003351!2.86e-09!23;UBERON:0009113!2.86e-09!23;UBERON:0003295!2.86e-09!23;UBERON:0009722!2.86e-09!23;UBERON:0005562!2.86e-09!23;UBERON:0007690!2.86e-09!23;UBERON:0006562!3.04e-09!24;UBERON:0001557!3.04e-09!24;UBERON:0001042!3.04e-09!24;UBERON:0008814!3.04e-09!24;UBERON:0009145!3.04e-09!24;UBERON:0000955!3.79e-09!50;UBERON:0006238!3.79e-09!50;UBERON:0002616!8.18e-09!49;UBERON:0000073!1.49e-08!75;UBERON:0001016!1.49e-08!75;UBERON:0000956!3.07e-08!21;UBERON:0001869!3.07e-08!21;UBERON:0000203!3.07e-08!21;UBERON:0000065!3.58e-08!41;UBERON:0003408!4.05e-08!24;UBERON:0004177!4.11e-08!29;UBERON:0002020!5.64e-08!34;UBERON:0002791!7.23e-08!29;UBERON:0003528!7.23e-08!29;UBERON:0001893!7.23e-08!29;UBERON:0002619!1.11e-07!17;UBERON:0001004!2.06e-07!42;UBERON:0000477!2.36e-07!154;UBERON:0000072!5.49e-07!27;UBERON:0003056!5.81e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.75e-10,39;UBERON:0001890,4.75e-10,39;UBERON:0006240,4.75e-10,39;UBERON:0003080,7.55e-10,40;UBERON:0000955,7.70e-10,47;UBERON:0006238,7.70e-10,47;UBERON:0001049,1.11e-09,52;UBERON:0005068,1.11e-09,52;UBERON:0006241,1.11e-09,52;UBERON:0007135,1.11e-09,52;UBERON:0002616,1.70e-09,46;UBERON:0001017,2.58e-09,73;UBERON:0002370,2.67e-09,23;UBERON:0000974,2.67e-09,23;UBERON:0004807,2.67e-09,23;UBERON:0005058,2.67e-09,23;UBERON:0003351,2.67e-09,23;UBERON:0009113,2.67e-09,23;UBERON:0003295,2.67e-09,23;UBERON:0009722,2.67e-09,23;UBERON:0005562,2.67e-09,23;UBERON:0007690,2.67e-09,23;UBERON:0006562,2.84e-09,24;UBERON:0001557,2.84e-09,24;UBERON:0001042,2.84e-09,24;UBERON:0008814,2.84e-09,24;UBERON:0009145,2.84e-09,24;UBERON:0000073,4.19e-09,54;UBERON:0001016,1.46e-08,75;UBERON:0000956,3.07e-08,21;UBERON:0001869,3.07e-08,21;UBERON:0000203,3.07e-08,21;UBERON:0000065,3.40e-08,41;UBERON:0004177,3.88e-08,29;UBERON:0005057,3.88e-08,29;UBERON:0003408,3.95e-08,24;UBERON:0002020,5.64e-08,34;UBERON:0003528,7.23e-08,29;UBERON:0002791,7.23e-08,29;UBERON:0001893,7.23e-08,29;UBERON:0002619,1.11e-07,17;UBERON:0001004,2.02e-07,42;UBERON:0000072,5.20e-07,27;UBERON:0003056,5.81e-07,49;UBERON:0002346,6.06e-07,64;UBERON:0003075,6.06e-07,64;UBERON:0007284,6.06e-07,64 | |||
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| |||
|short_description=p2@Nudcd3 | |||
}} |
Revision as of 20:14, 12 September 2013
Short description: | p2@Nudcd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nudcd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000066496_5end |
EntrezGene: | Nudcd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.