FFCP PHASE1:Mm9::chr19:21245354..21245359,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=28|UniProt=|association_with_transcript=-23bp_to_uc008gyt.1_5end|description=CAGE_peak_4_at_uc008gyt.1_5end|id=chr19:21245354..21245359,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!1.87e-12!3;UBERON:0006555!1.87e-12!3;UBERON:0005103!1.87e-12!3;UBERON:0000083!1.87e-12!3;UBERON:0009201!1.87e-12!3;UBERON:0004819!1.87e-12!3;UBERON:0006553!1.87e-12!3;UBERON:0003074!1.87e-12!3;UBERON:0003060!1.87e-12!3;UBERON:0004175!6.27e-11!9;UBERON:0001911!1.38e-09!2;UBERON:0000076!1.38e-09!2;UBERON:0005333!1.38e-09!2;UBERON:0008425!1.38e-09!2;UBERON:0005311!1.38e-09!2;UBERON:0000080!1.80e-09!4;UBERON:0005904!1.80e-09!4;UBERON:0006947!1.80e-09!4;UBERON:0002120!1.80e-09!4;UBERON:0004054!1.80e-09!4;UBERON:0004875!1.80e-09!4;UBERON:0004876!1.80e-09!4;UBERON:0005721!1.80e-09!4;UBERON:0005754!1.80e-09!4;UBERON:0007297!1.80e-09!4;UBERON:0001343!1.55e-08!2;UBERON:0004910!1.55e-08!2;UBERON:0004909!1.55e-08!2;UBERON:0005154!1.55e-08!2;UBERON:0005295!1.55e-08!2;UBERON:0005297!1.55e-08!2;UBERON:0005294!1.55e-08!2;UBERON:0010141!1.55e-08!2;UBERON:0005891!1.55e-08!2;UBERON:0005085!4.90e-08!13;UBERON:0004122!9.70e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.39e-22,1;UBERON:0001556,1.39e-22,1;UBERON:0005085,5.32e-16,13;UBERON:0001911,4.02e-12,2;UBERON:0000076,4.02e-12,2;UBERON:0005333,4.02e-12,2;UBERON:0008425,4.02e-12,2;UBERON:0005311,4.02e-12,2;UBERON:0000970,8.07e-11,9;UBERON:0000019,8.07e-11,9;UBERON:0000047,8.07e-11,9;UBERON:0010312,8.07e-11,9;UBERON:0004088,8.07e-11,9;UBERON:0002104,8.07e-11,9;UBERON:0001456,8.07e-11,9;UBERON:0003072,8.07e-11,9;UBERON:0004128,8.07e-11,9;UBERON:0003071,8.07e-11,9;UBERON:0001444,4.82e-09,11;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0000020,2.25e-08,12;UBERON:0001032,2.25e-08,12;UBERON:0004456,2.25e-08,12;UBERON:0000033,8.31e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.505445516867349,6.52369753248069,0,0,0,0,0,0,0.0937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@uc008gyt.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_uc008gyt.1_5end | |||
|description=CAGE_peak_4_at_uc008gyt.1_5end | |||
|id=chr19:21245354..21245359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!1.87e-12!3;UBERON:0006555!1.87e-12!3;UBERON:0005103!1.87e-12!3;UBERON:0000083!1.87e-12!3;UBERON:0009201!1.87e-12!3;UBERON:0004819!1.87e-12!3;UBERON:0006553!1.87e-12!3;UBERON:0003074!1.87e-12!3;UBERON:0003060!1.87e-12!3;UBERON:0004175!6.27e-11!9;UBERON:0001911!1.38e-09!2;UBERON:0000076!1.38e-09!2;UBERON:0005333!1.38e-09!2;UBERON:0008425!1.38e-09!2;UBERON:0005311!1.38e-09!2;UBERON:0000080!1.80e-09!4;UBERON:0005904!1.80e-09!4;UBERON:0006947!1.80e-09!4;UBERON:0002120!1.80e-09!4;UBERON:0004054!1.80e-09!4;UBERON:0004875!1.80e-09!4;UBERON:0004876!1.80e-09!4;UBERON:0005721!1.80e-09!4;UBERON:0005754!1.80e-09!4;UBERON:0007297!1.80e-09!4;UBERON:0001343!1.55e-08!2;UBERON:0004910!1.55e-08!2;UBERON:0004909!1.55e-08!2;UBERON:0005154!1.55e-08!2;UBERON:0005295!1.55e-08!2;UBERON:0005297!1.55e-08!2;UBERON:0005294!1.55e-08!2;UBERON:0010141!1.55e-08!2;UBERON:0005891!1.55e-08!2;UBERON:0005085!4.90e-08!13;UBERON:0004122!9.70e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.39e-22,1;UBERON:0001556,1.39e-22,1;UBERON:0005085,5.32e-16,13;UBERON:0001911,4.02e-12,2;UBERON:0000076,4.02e-12,2;UBERON:0005333,4.02e-12,2;UBERON:0008425,4.02e-12,2;UBERON:0005311,4.02e-12,2;UBERON:0000970,8.07e-11,9;UBERON:0000019,8.07e-11,9;UBERON:0000047,8.07e-11,9;UBERON:0010312,8.07e-11,9;UBERON:0004088,8.07e-11,9;UBERON:0002104,8.07e-11,9;UBERON:0001456,8.07e-11,9;UBERON:0003072,8.07e-11,9;UBERON:0004128,8.07e-11,9;UBERON:0003071,8.07e-11,9;UBERON:0001444,4.82e-09,11;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0000020,2.25e-08,12;UBERON:0001032,2.25e-08,12;UBERON:0004456,2.25e-08,12;UBERON:0000033,8.31e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.505445516867349,6.52369753248069,0,0,0,0,0,0,0.0937017245597288,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@uc008gyt.1 | |||
}} |
Revision as of 17:10, 13 September 2013
Short description: | p4@uc008gyt.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_uc008gyt.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | -23bp_to_uc008gyt.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary bladder | 1.39e-22 | 1 |
lower urinary tract | 1.39e-22 | 1 |
ectodermal placode | 5.32e-16 | 13 |
mammary gland | 4.02e-12 | 2 |
external ectoderm | 4.02e-12 | 2 |
mammary bud | 4.02e-12 | 2 |
mammary ridge | 4.02e-12 | 2 |
mammary placode | 4.02e-12 | 2 |
eye | 8.07e-11 | 9 |
camera-type eye | 8.07e-11 | 9 |
simple eye | 8.07e-11 | 9 |
immature eye | 8.07e-11 | 9 |
ocular region | 8.07e-11 | 9 |
visual system | 8.07e-11 | 9 |
face | 8.07e-11 | 9 |
optic cup | 8.07e-11 | 9 |
optic vesicle | 8.07e-11 | 9 |
eye primordium | 8.07e-11 | 9 |
subdivision of head | 4.82e-09 | 11 |
cloaca | 1.88e-08 | 3 |
anal region | 1.88e-08 | 3 |
embryonic cloaca | 1.88e-08 | 3 |
terminal part of digestive tract | 1.88e-08 | 3 |
hindgut | 1.88e-08 | 3 |
primitive urogenital sinus | 1.88e-08 | 3 |
proctodeum | 1.88e-08 | 3 |
sense organ | 2.25e-08 | 12 |
sensory system | 2.25e-08 | 12 |
entire sense organ system | 2.25e-08 | 12 |
head | 8.31e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.