FFCP PHASE1:Mm9::chr10:126602308..126602319,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14421|HGNC=|UniProt=Q8VDF0,Q3UN35|association_with_transcript=27bp_to_uc007hib.1,uc007hic.1,uc007hid.1_5end|description=CAGE_peak_9_at_B4galnt1_5end|id=chr10:126602308..126602319,+|ontology_enrichment_celltype=CL:0000063!2.27e-07!66|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-13,25;CL:0000791,3.35e-11,9;CL:0000789,3.35e-11,9;CL:0002420,3.35e-11,9;CL:0002419,3.35e-11,9;CL:0000790,3.35e-11,9;CL:0000223,6.46e-11,20;CL:0000893,5.83e-10,6;CL:0002489,5.83e-10,6;CL:0000898,5.83e-10,6;CL:0000809,5.83e-10,6;CL:0000810,5.83e-10,6;CL:0000895,5.83e-10,6;CL:0000808,5.83e-10,6;CL:0000894,5.83e-10,6;CL:0000806,5.83e-10,6;CL:0000807,5.83e-10,6;CL:0000805,5.83e-10,6;CL:0002425,5.83e-10,6;CL:0002436,5.83e-10,6;CL:0002427,5.83e-10,6;CL:0002428,5.83e-10,6;CL:0002429,5.83e-10,6;CL:0002433,5.83e-10,6;CL:0002431,5.83e-10,6;CL:0002432,5.83e-10,6;CL:0000624,1.22e-09,8;CL:0002563,2.04e-09,9;CL:0002251,2.04e-09,9;CL:0000084,8.13e-09,11;CL:0000827,8.13e-09,11;CL:0000838,6.32e-08,12;CL:0000738,1.56e-07,17;CL:0002087,1.56e-07,17;CL:0002076,1.83e-07,15;CL:0000542,3.56e-07,13;CL:0000051,3.56e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.86e-11!128;UBERON:0001555!2.86e-11!128;UBERON:0007026!2.86e-11!128;UBERON:0004119!4.56e-11!130;UBERON:0000925!4.56e-11!130;UBERON:0006595!4.56e-11!130;UBERON:0004921!1.74e-10!126;UBERON:0004185!1.74e-10!126;UBERON:0000160!1.91e-09!43;UBERON:0000344!3.70e-09!15;UBERON:0000064!1.06e-08!99;UBERON:0001242!3.19e-08!13;UBERON:0000060!3.19e-08!13;UBERON:0001262!3.19e-08!13;UBERON:0004786!3.19e-08!13;UBERON:0003929!4.10e-08!55;UBERON:0005409!6.99e-08!59;UBERON:0000490!9.81e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.83e-14,15;UBERON:0001242,8.35e-12,13;UBERON:0001262,8.35e-12,13;UBERON:0004786,8.35e-12,13;UBERON:0000160,4.48e-11,31;UBERON:0003350,2.04e-09,9;UBERON:0004808,2.04e-09,9;UBERON:0001277,2.04e-09,9;UBERON:0001007,1.05e-08,116;UBERON:0001555,1.05e-08,116;UBERON:0007026,1.05e-08,116;UBERON:0004119,2.15e-08,118;UBERON:0000925,2.15e-08,118;UBERON:0006595,2.15e-08,118;UBERON:0003929,7.34e-08,55;UBERON:0004921,1.15e-07,114;UBERON:0000485,2.08e-07,11;UBERON:0004923,2.20e-07,24|phase1_expression=0,3.14077866875425,6.3699893514535,1.20985684522732,1.00179145989269,2.68606835059024,0.934450562382103,2.58246646883153,2.67498572088167,2.57470978954193,3.08192342805909,2.6324812468461,3.76641605848653,3.3219752919219,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.255129870453209,0.496454756004426,0.522399578277871,1.59992422793407,1.37645568640302,2.29692785646008,3.4460959692726,2.58565479223067,3.80046838912748,1.26015064879965,2.43903561720835,0,1.23012957516914,0,3.46621943701529,1.16364251750945,1.63335485009895,0,0.7813353445238,0,0,0,0,0.125896817975577,0.811015449756117,3.12029478674859,0,0,0,0,0,0,0,0,6.38578218370682,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,0.7104801149461,0,1.15265491596466,0.518448061542388,0.405017814995072,0,0.571301968807607,0.441737081903227,0,0.575072826109418,0,0,0.766124028511126,0.614426133024974,0.659431438650969,0.274462930807229,0.52091337055676,0.837548997004143,0,0.30559649555362,0.883885756421003,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0.860423876981386,1.3599426674155,3.77792234146472,2.59910566979068,1.79210754838934,0.702222100658759,0.170430322578058,0,0,0,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,1.48439043634778,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.585561594023094,0.209446706813455,1.53274233125155,0.958520996047362,0.599902730993408,0.889491589511453,0,0.457500602818626,0.879580464790051,1.39059456153821,0.767146371990992,0.83115217823824,0.324482526135515,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,1.40442637462647,2.05878325691772,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0.991256348951394,1.58670339998127,0,0,0,0.605050573870028,0.667134131534611,0.570676878337677,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,4.49409704327111,2.59365659849633,1.99141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,2.37162101669719,0,0,0,0.405720242777006,0.241177159752417,0,0,0.648540907100142,0.274561413188081,0,0,0.624075346229121,2.27320990152401,0.358794827043824,2.41221760681684,0.554259570499814,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0.551873492609465,1.12385412991454,0.820481806145422,0,0,0.631016438832513,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,2.65490276679926,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.775284879504663,0,0.356497378384721,2.84433082142234,3.16255825724996,3.09406629744561,0,0,0,0,0,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.301564624640779,0,0.164140899745061,1.45740418314925,2.03967832211561,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.457556346413045,1.01987057996313,0.69975726161829,1.24379976423981,0.954670618015114,0,0.203319467126849,0.432021363287205,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,1.03691978633434,2.4853572523477,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.240390899039938,0.886137163047463,0.403865799792591,0.457240839929999,0.201652370273681,0.292373642219257,0.769694733122636,1.63627663054197,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,0,1.55328093525546,0.103787347584177,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0,0.338458431566706,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0,0.644613162144895,0,0,0.231867835620421|short_description=p9@B4galnt1}} | ||
|EntrezGene=14421 | |||
|HGNC= | |||
|UniProt=Q8VDF0,Q3UN35 | |||
|association_with_transcript=27bp_to_uc007hib.1,uc007hic.1,uc007hid.1_5end | |||
|description=CAGE_peak_9_at_B4galnt1_5end | |||
|id=chr10:126602308..126602319,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.27e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-13,25;CL:0000791,3.35e-11,9;CL:0000789,3.35e-11,9;CL:0002420,3.35e-11,9;CL:0002419,3.35e-11,9;CL:0000790,3.35e-11,9;CL:0000223,6.46e-11,20;CL:0000893,5.83e-10,6;CL:0002489,5.83e-10,6;CL:0000898,5.83e-10,6;CL:0000809,5.83e-10,6;CL:0000810,5.83e-10,6;CL:0000895,5.83e-10,6;CL:0000808,5.83e-10,6;CL:0000894,5.83e-10,6;CL:0000806,5.83e-10,6;CL:0000807,5.83e-10,6;CL:0000805,5.83e-10,6;CL:0002425,5.83e-10,6;CL:0002436,5.83e-10,6;CL:0002427,5.83e-10,6;CL:0002428,5.83e-10,6;CL:0002429,5.83e-10,6;CL:0002433,5.83e-10,6;CL:0002431,5.83e-10,6;CL:0002432,5.83e-10,6;CL:0000624,1.22e-09,8;CL:0002563,2.04e-09,9;CL:0002251,2.04e-09,9;CL:0000084,8.13e-09,11;CL:0000827,8.13e-09,11;CL:0000838,6.32e-08,12;CL:0000738,1.56e-07,17;CL:0002087,1.56e-07,17;CL:0002076,1.83e-07,15;CL:0000542,3.56e-07,13;CL:0000051,3.56e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.86e-11!128;UBERON:0001555!2.86e-11!128;UBERON:0007026!2.86e-11!128;UBERON:0004119!4.56e-11!130;UBERON:0000925!4.56e-11!130;UBERON:0006595!4.56e-11!130;UBERON:0004921!1.74e-10!126;UBERON:0004185!1.74e-10!126;UBERON:0000160!1.91e-09!43;UBERON:0000344!3.70e-09!15;UBERON:0000064!1.06e-08!99;UBERON:0001242!3.19e-08!13;UBERON:0000060!3.19e-08!13;UBERON:0001262!3.19e-08!13;UBERON:0004786!3.19e-08!13;UBERON:0003929!4.10e-08!55;UBERON:0005409!6.99e-08!59;UBERON:0000490!9.81e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.83e-14,15;UBERON:0001242,8.35e-12,13;UBERON:0001262,8.35e-12,13;UBERON:0004786,8.35e-12,13;UBERON:0000160,4.48e-11,31;UBERON:0003350,2.04e-09,9;UBERON:0004808,2.04e-09,9;UBERON:0001277,2.04e-09,9;UBERON:0001007,1.05e-08,116;UBERON:0001555,1.05e-08,116;UBERON:0007026,1.05e-08,116;UBERON:0004119,2.15e-08,118;UBERON:0000925,2.15e-08,118;UBERON:0006595,2.15e-08,118;UBERON:0003929,7.34e-08,55;UBERON:0004921,1.15e-07,114;UBERON:0000485,2.08e-07,11;UBERON:0004923,2.20e-07,24 | |||
|phase1_expression=0,3.14077866875425,6.3699893514535,1.20985684522732,1.00179145989269,2.68606835059024,0.934450562382103,2.58246646883153,2.67498572088167,2.57470978954193,3.08192342805909,2.6324812468461,3.76641605848653,3.3219752919219,0,0,0,0.630924330716475,0.274228867211478,0.84877930359606,0.255129870453209,0.496454756004426,0.522399578277871,1.59992422793407,1.37645568640302,2.29692785646008,3.4460959692726,2.58565479223067,3.80046838912748,1.26015064879965,2.43903561720835,0,1.23012957516914,0,3.46621943701529,1.16364251750945,1.63335485009895,0,0.7813353445238,0,0,0,0,0.125896817975577,0.811015449756117,3.12029478674859,0,0,0,0,0,0,0,0,6.38578218370682,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,0.7104801149461,0,1.15265491596466,0.518448061542388,0.405017814995072,0,0.571301968807607,0.441737081903227,0,0.575072826109418,0,0,0.766124028511126,0.614426133024974,0.659431438650969,0.274462930807229,0.52091337055676,0.837548997004143,0,0.30559649555362,0.883885756421003,0.427115042397309,0.372798891650601,0.075726193333184,0,0,0.860423876981386,1.3599426674155,3.77792234146472,2.59910566979068,1.79210754838934,0.702222100658759,0.170430322578058,0,0,0,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,1.48439043634778,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0.585561594023094,0.209446706813455,1.53274233125155,0.958520996047362,0.599902730993408,0.889491589511453,0,0.457500602818626,0.879580464790051,1.39059456153821,0.767146371990992,0.83115217823824,0.324482526135515,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,1.40442637462647,2.05878325691772,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0.991256348951394,1.58670339998127,0,0,0,0.605050573870028,0.667134131534611,0.570676878337677,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,4.49409704327111,2.59365659849633,1.99141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,2.37162101669719,0,0,0,0.405720242777006,0.241177159752417,0,0,0.648540907100142,0.274561413188081,0,0,0.624075346229121,2.27320990152401,0.358794827043824,2.41221760681684,0.554259570499814,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0.289298117163023,1.50791283939272,0,0,0.551873492609465,1.12385412991454,0.820481806145422,0,0,0.631016438832513,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,2.65490276679926,0,0,0.188605079755898,0.885905678642318,0.307435147943927,0.775284879504663,0,0.356497378384721,2.84433082142234,3.16255825724996,3.09406629744561,0,0,0,0,0,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.301564624640779,0,0.164140899745061,1.45740418314925,2.03967832211561,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.457556346413045,1.01987057996313,0.69975726161829,1.24379976423981,0.954670618015114,0,0.203319467126849,0.432021363287205,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,1.03691978633434,2.4853572523477,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.240390899039938,0.886137163047463,0.403865799792591,0.457240839929999,0.201652370273681,0.292373642219257,0.769694733122636,1.63627663054197,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,1.00314420807073,1.6942555278512,0.460325236507177,0,0.343706364687375,1.37016503954128,0,0.675022500231806,0.45032120322422,0,1.55328093525546,0.103787347584177,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0,0.338458431566706,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.578719832943424,0,0,0.644613162144895,0,0,0.231867835620421 | |||
|short_description=p9@B4galnt1 | |||
}} |
Revision as of 15:59, 12 September 2013
Short description: | p9@B4galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_B4galnt1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_uc007hib.1, uc007hic.1, uc007hid.1_5end |
EntrezGene: | B4galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 8.83e-14 | 15 |
intestinal mucosa | 8.35e-12 | 13 |
wall of intestine | 8.35e-12 | 13 |
gastrointestinal system mucosa | 8.35e-12 | 13 |
intestine | 4.48e-11 | 31 |
epithelium of mucosa | 2.04e-09 | 9 |
gastrointestinal system epithelium | 2.04e-09 | 9 |
intestinal epithelium | 2.04e-09 | 9 |
digestive system | 1.05e-08 | 116 |
digestive tract | 1.05e-08 | 116 |
primitive gut | 1.05e-08 | 116 |
endoderm-derived structure | 2.15e-08 | 118 |
endoderm | 2.15e-08 | 118 |
presumptive endoderm | 2.15e-08 | 118 |
gut epithelium | 7.34e-08 | 55 |
subdivision of digestive tract | 1.15e-07 | 114 |
simple columnar epithelium | 2.08e-07 | 11 |
organ component layer | 2.20e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.