FFCP PHASE1:Mm9::chr5:149204386..149204392,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11987|HGNC=|MCL_coexpression_id=22|UniProt=E9Q3N1|association_with_transcript=0bp_to_ENSMUST00000138257,uc009aot.1_5end|description=CAGE_peak_3_at_Slc7a1_5end|id=chr5:149204386..149204392,-|ontology_enrichment_celltype=CL:0000117!2.29e-20!23;CL:0000337!2.29e-20!23;CL:0000540!3.89e-12!33;CL:0000047!3.89e-12!33;CL:0000031!3.89e-12!33;CL:0000404!3.89e-12!33;CL:0000393!7.83e-09!39;CL:0000211!7.83e-09!39;CL:0002319!3.30e-07!43;CL:0002609!5.72e-07!6;CL:0000221!7.42e-07!44;CL:0000133!7.42e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.18e-25,23;CL:0000337,7.18e-25,23;CL:0000540,7.87e-16,33;CL:0000047,7.87e-16,33;CL:0000031,7.87e-16,33;CL:0000404,7.87e-16,33;CL:0000393,4.22e-12,39;CL:0000211,4.22e-12,39;CL:0002319,3.15e-10,43;CL:0000221,8.09e-10,44;CL:0000133,8.09e-10,44;CL:0002609,2.88e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-28!52;UBERON:0005068!1.08e-28!52;UBERON:0006241!1.08e-28!52;UBERON:0007135!1.08e-28!52;UBERON:0000955!1.08e-25!50;UBERON:0006238!1.08e-25!50;UBERON:0002616!5.69e-25!49;UBERON:0001017!1.48e-24!73;UBERON:0005743!1.48e-24!73;UBERON:0000033!1.53e-24!63;UBERON:0002346!6.45e-24!71;UBERON:0003075!6.45e-24!71;UBERON:0007284!6.45e-24!71;UBERON:0000073!2.53e-23!75;UBERON:0001016!2.53e-23!75;UBERON:0002020!3.86e-23!34;UBERON:0003056!1.68e-22!49;UBERON:0003080!4.96e-22!40;UBERON:0002780!3.05e-21!39;UBERON:0001890!3.05e-21!39;UBERON:0006240!3.05e-21!39;UBERON:0002791!1.56e-18!29;UBERON:0003528!1.56e-18!29;UBERON:0001893!1.56e-18!29;UBERON:0004121!1.16e-17!102;UBERON:0000924!1.16e-17!102;UBERON:0006601!1.16e-17!102;UBERON:0007811!6.55e-13!86;UBERON:0000956!3.32e-12!21;UBERON:0001869!3.32e-12!21;UBERON:0000203!3.32e-12!21;UBERON:0000153!2.38e-10!94;UBERON:0002619!6.64e-09!17;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0003076!4.22e-07!12;UBERON:0003057!4.22e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.35e-30,54;UBERON:0001049,1.29e-28,52;UBERON:0005068,1.29e-28,52;UBERON:0006241,1.29e-28,52;UBERON:0007135,1.29e-28,52;UBERON:0001017,2.34e-26,73;UBERON:0002020,8.24e-26,34;UBERON:0001016,3.31e-25,75;UBERON:0002346,4.99e-25,64;UBERON:0003075,4.99e-25,64;UBERON:0007284,4.99e-25,64;UBERON:0000955,4.99e-23,47;UBERON:0006238,4.99e-23,47;UBERON:0002616,3.37e-22,46;UBERON:0010371,5.35e-21,73;UBERON:0003080,2.44e-20,40;UBERON:0003528,3.21e-20,29;UBERON:0002791,3.21e-20,29;UBERON:0001893,3.21e-20,29;UBERON:0004121,6.72e-20,95;UBERON:0000924,6.72e-20,95;UBERON:0006601,6.72e-20,95;UBERON:0002780,1.97e-19,39;UBERON:0001890,1.97e-19,39;UBERON:0006240,1.97e-19,39;UBERON:0003056,6.83e-19,49;UBERON:0010314,1.34e-13,92;UBERON:0000956,1.38e-12,21;UBERON:0001869,1.38e-12,21;UBERON:0000203,1.38e-12,21;UBERON:0002420,3.79e-09,8;UBERON:0007245,3.79e-09,8;UBERON:0010009,3.79e-09,8;UBERON:0010011,3.79e-09,8;UBERON:0000454,3.79e-09,8;UBERON:0003076,9.88e-09,12;UBERON:0003057,9.88e-09,12;UBERON:0002619,1.07e-08,17;UBERON:0002240,6.82e-08,6;UBERON:0005174,6.82e-08,6;UBERON:0001137,6.82e-08,6;UBERON:0001948,5.73e-07,5;UBERON:0002315,5.73e-07,5;UBERON:0000369,6.56e-07,5;UBERON:0002435,6.56e-07,5;UBERON:0000204,6.56e-07,5;UBERON:0010082,6.56e-07,5|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1968991730658,19.0436752537932,23.4517619297286,0,0,0,0,0,0,0,22.9154043201736,25.2461104680262,24.1873705554089,18.2816630018434,22.7494597180162,16.2912762955889,25.0156679357597,16.5459381589804,2.20231761998777,5.49055553766307,4.6081959976873,23.2119866405141,27.6292683679277,23.962015045611,6.14202597803038,3.93933827022176,5.80633341551878,20.6240009831567,18.7930618654816,21.6223357157349,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,7.54008144528438,0,0,0,0,7.78911324905078,7.32000964509802,14.7015591972051,5.56237824615285,10.9957646652042,6.02585329222724,9.24775199486219,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,1.90502197623718,2.562274405697,2.99845518591132,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,33.3410944108882,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.442655759869801,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9541365792431,11.1351102262593,0,0,0,0,0,0,0,0,0,0,0,5.46246237917072,0.141940085208269,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,2.8458910432206,2.35770738534752,0.532020700926821,0.178368817602071,4.27827453565514,0.913394847343798,0.23467170806371,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.60078132449013,7.36520378411483,8.59343270159095,10.8267504876523,4.7955776383945,2.2661816921691,2.70009000092722,0.45032120322422,0.906284817968409,3.62432218226274,0,2.39414924040619,3.24393850932855,2.67417388775123,1.25767897576789,1.47074806760011,6.44515510624684,4.53277125925567,5.45562656306086,3.79045817645696,4.30914809813408,3.9611531691076,3.09016974650612,3.71345883948242,3.0440798546475,3.33405583898152,3.47652977834566,4.24400285020151,3.70877310722976,3.09117732282234,2.05721551431249,3.54951612318675,4.29185141905178,3.34296758254356,3.19971893412124,3.9768865709088,2.74391959309159,2.63069711437843,3.80251518768413,6.17256498823512,3.79632057997357,2.65962102414021,4.50154147486658,3.71848418846318,0.771626443924566,8.99318080576605,3.50897412668113,2.79332370262788,1.53030665655075,1.76473135295612,0.463735671240843|short_description=p3@Slc7a1}} | ||
|EntrezGene=11987 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=E9Q3N1 | |||
|association_with_transcript=0bp_to_ENSMUST00000138257,uc009aot.1_5end | |||
|description=CAGE_peak_3_at_Slc7a1_5end | |||
|id=chr5:149204386..149204392,- | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-20!23;CL:0000337!2.29e-20!23;CL:0000540!3.89e-12!33;CL:0000047!3.89e-12!33;CL:0000031!3.89e-12!33;CL:0000404!3.89e-12!33;CL:0000393!7.83e-09!39;CL:0000211!7.83e-09!39;CL:0002319!3.30e-07!43;CL:0002609!5.72e-07!6;CL:0000221!7.42e-07!44;CL:0000133!7.42e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.18e-25,23;CL:0000337,7.18e-25,23;CL:0000540,7.87e-16,33;CL:0000047,7.87e-16,33;CL:0000031,7.87e-16,33;CL:0000404,7.87e-16,33;CL:0000393,4.22e-12,39;CL:0000211,4.22e-12,39;CL:0002319,3.15e-10,43;CL:0000221,8.09e-10,44;CL:0000133,8.09e-10,44;CL:0002609,2.88e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-28!52;UBERON:0005068!1.08e-28!52;UBERON:0006241!1.08e-28!52;UBERON:0007135!1.08e-28!52;UBERON:0000955!1.08e-25!50;UBERON:0006238!1.08e-25!50;UBERON:0002616!5.69e-25!49;UBERON:0001017!1.48e-24!73;UBERON:0005743!1.48e-24!73;UBERON:0000033!1.53e-24!63;UBERON:0002346!6.45e-24!71;UBERON:0003075!6.45e-24!71;UBERON:0007284!6.45e-24!71;UBERON:0000073!2.53e-23!75;UBERON:0001016!2.53e-23!75;UBERON:0002020!3.86e-23!34;UBERON:0003056!1.68e-22!49;UBERON:0003080!4.96e-22!40;UBERON:0002780!3.05e-21!39;UBERON:0001890!3.05e-21!39;UBERON:0006240!3.05e-21!39;UBERON:0002791!1.56e-18!29;UBERON:0003528!1.56e-18!29;UBERON:0001893!1.56e-18!29;UBERON:0004121!1.16e-17!102;UBERON:0000924!1.16e-17!102;UBERON:0006601!1.16e-17!102;UBERON:0007811!6.55e-13!86;UBERON:0000956!3.32e-12!21;UBERON:0001869!3.32e-12!21;UBERON:0000203!3.32e-12!21;UBERON:0000153!2.38e-10!94;UBERON:0002619!6.64e-09!17;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0003076!4.22e-07!12;UBERON:0003057!4.22e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.35e-30,54;UBERON:0001049,1.29e-28,52;UBERON:0005068,1.29e-28,52;UBERON:0006241,1.29e-28,52;UBERON:0007135,1.29e-28,52;UBERON:0001017,2.34e-26,73;UBERON:0002020,8.24e-26,34;UBERON:0001016,3.31e-25,75;UBERON:0002346,4.99e-25,64;UBERON:0003075,4.99e-25,64;UBERON:0007284,4.99e-25,64;UBERON:0000955,4.99e-23,47;UBERON:0006238,4.99e-23,47;UBERON:0002616,3.37e-22,46;UBERON:0010371,5.35e-21,73;UBERON:0003080,2.44e-20,40;UBERON:0003528,3.21e-20,29;UBERON:0002791,3.21e-20,29;UBERON:0001893,3.21e-20,29;UBERON:0004121,6.72e-20,95;UBERON:0000924,6.72e-20,95;UBERON:0006601,6.72e-20,95;UBERON:0002780,1.97e-19,39;UBERON:0001890,1.97e-19,39;UBERON:0006240,1.97e-19,39;UBERON:0003056,6.83e-19,49;UBERON:0010314,1.34e-13,92;UBERON:0000956,1.38e-12,21;UBERON:0001869,1.38e-12,21;UBERON:0000203,1.38e-12,21;UBERON:0002420,3.79e-09,8;UBERON:0007245,3.79e-09,8;UBERON:0010009,3.79e-09,8;UBERON:0010011,3.79e-09,8;UBERON:0000454,3.79e-09,8;UBERON:0003076,9.88e-09,12;UBERON:0003057,9.88e-09,12;UBERON:0002619,1.07e-08,17;UBERON:0002240,6.82e-08,6;UBERON:0005174,6.82e-08,6;UBERON:0001137,6.82e-08,6;UBERON:0001948,5.73e-07,5;UBERON:0002315,5.73e-07,5;UBERON:0000369,6.56e-07,5;UBERON:0002435,6.56e-07,5;UBERON:0000204,6.56e-07,5;UBERON:0010082,6.56e-07,5 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1968991730658,19.0436752537932,23.4517619297286,0,0,0,0,0,0,0,22.9154043201736,25.2461104680262,24.1873705554089,18.2816630018434,22.7494597180162,16.2912762955889,25.0156679357597,16.5459381589804,2.20231761998777,5.49055553766307,4.6081959976873,23.2119866405141,27.6292683679277,23.962015045611,6.14202597803038,3.93933827022176,5.80633341551878,20.6240009831567,18.7930618654816,21.6223357157349,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,2.63502717310392,7.54008144528438,0,0,0,0,7.78911324905078,7.32000964509802,14.7015591972051,5.56237824615285,10.9957646652042,6.02585329222724,9.24775199486219,0.101839363850316,0.124406970610093,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0.30140963567143,1.90502197623718,2.562274405697,2.99845518591132,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14985825118033,33.3410944108882,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.442655759869801,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9541365792431,11.1351102262593,0,0,0,0,0,0,0,0,0,0,0,5.46246237917072,0.141940085208269,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,2.8458910432206,2.35770738534752,0.532020700926821,0.178368817602071,4.27827453565514,0.913394847343798,0.23467170806371,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,9.60078132449013,7.36520378411483,8.59343270159095,10.8267504876523,4.7955776383945,2.2661816921691,2.70009000092722,0.45032120322422,0.906284817968409,3.62432218226274,0,2.39414924040619,3.24393850932855,2.67417388775123,1.25767897576789,1.47074806760011,6.44515510624684,4.53277125925567,5.45562656306086,3.79045817645696,4.30914809813408,3.9611531691076,3.09016974650612,3.71345883948242,3.0440798546475,3.33405583898152,3.47652977834566,4.24400285020151,3.70877310722976,3.09117732282234,2.05721551431249,3.54951612318675,4.29185141905178,3.34296758254356,3.19971893412124,3.9768865709088,2.74391959309159,2.63069711437843,3.80251518768413,6.17256498823512,3.79632057997357,2.65962102414021,4.50154147486658,3.71848418846318,0.771626443924566,8.99318080576605,3.50897412668113,2.79332370262788,1.53030665655075,1.76473135295612,0.463735671240843 | |||
|short_description=p3@Slc7a1 | |||
}} |
Revision as of 07:05, 14 September 2013
Short description: | p3@Slc7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000138257, uc009aot.1_5end |
EntrezGene: | Slc7a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.18e-25 | 23 |
neuroblast (sensu Vertebrata) | 7.18e-25 | 23 |
neuron | 7.87e-16 | 33 |
neuronal stem cell | 7.87e-16 | 33 |
neuroblast | 7.87e-16 | 33 |
electrically signaling cell | 7.87e-16 | 33 |
electrically responsive cell | 4.22e-12 | 39 |
electrically active cell | 4.22e-12 | 39 |
neural cell | 3.15e-10 | 43 |
ectodermal cell | 8.09e-10 | 44 |
neurectodermal cell | 8.09e-10 | 44 |
neuron of cerebral cortex | 2.88e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.