FFCP PHASE1:Mm9::chr17:35341591..35341599,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=68|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:35341591..35341599,-|id=chr17:35341591..35341599,-|ontology_enrichment_celltype=CL:0000084!1.50e-24!11;CL:0000827!1.50e-24!11;CL:0000791!1.76e-24!9;CL:0000789!1.76e-24!9;CL:0002420!1.76e-24!9;CL:0002419!1.76e-24!9;CL:0000790!1.76e-24!9;CL:0000838!2.22e-22!12;CL:0000624!2.29e-21!8;CL:0002031!2.30e-21!25;CL:0000893!3.02e-21!6;CL:0002489!3.02e-21!6;CL:0000898!3.02e-21!6;CL:0000809!3.02e-21!6;CL:0000810!3.02e-21!6;CL:0000895!3.02e-21!6;CL:0000808!3.02e-21!6;CL:0000894!3.02e-21!6;CL:0000806!3.02e-21!6;CL:0000807!3.02e-21!6;CL:0000805!3.02e-21!6;CL:0002425!3.02e-21!6;CL:0002436!3.02e-21!6;CL:0002427!3.02e-21!6;CL:0002428!3.02e-21!6;CL:0002429!3.02e-21!6;CL:0002433!3.02e-21!6;CL:0002431!3.02e-21!6;CL:0002432!3.02e-21!6;CL:0000542!1.53e-20!13;CL:0000051!1.53e-20!13;CL:0000988!9.82e-19!32;CL:0002032!9.82e-19!32;CL:0000037!9.82e-19!32;CL:0000566!9.82e-19!32;CL:0000837!9.82e-19!32;CL:0000738!2.39e-15!17;CL:0002087!2.39e-15!17;CL:0002320!3.58e-12!46;CL:0000134!3.58e-12!46;CL:0000219!5.95e-10!54;CL:0000553!1.21e-09!6;CL:0000556!1.21e-09!6;CL:0000063!6.73e-09!66|ontology_enrichment_celltype_v019_2=CL:0000624,2.11e-39,8;CL:0000791,4.33e-35,9;CL:0000789,4.33e-35,9;CL:0002420,4.33e-35,9;CL:0002419,4.33e-35,9;CL:0000790,4.33e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,8.23e-29,11;CL:0000827,8.23e-29,11;CL:0000838,1.87e-26,12;CL:0000542,1.86e-24,13;CL:0000051,1.86e-24,13;CL:0000738,8.20e-19,17;CL:0002087,8.20e-19,17;CL:0002031,3.21e-18,25;CL:0000988,2.68e-14,32;CL:0002032,2.68e-14,32;CL:0000037,2.68e-14,32;CL:0000837,2.68e-14,32;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0002320,5.17e-10,46;CL:0000134,5.17e-10,46;CL:0000219,1.49e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.91e-22!48;UBERON:0002390!5.39e-21!45;UBERON:0003061!5.39e-21!45;UBERON:0004177!5.28e-20!29;UBERON:0002370!4.28e-19!23;UBERON:0000974!4.28e-19!23;UBERON:0004807!4.28e-19!23;UBERON:0005058!4.28e-19!23;UBERON:0003351!4.28e-19!23;UBERON:0009113!4.28e-19!23;UBERON:0003295!4.28e-19!23;UBERON:0009722!4.28e-19!23;UBERON:0005562!4.28e-19!23;UBERON:0007690!4.28e-19!23;UBERON:0000072!9.33e-19!27;UBERON:0006562!3.33e-18!24;UBERON:0003408!3.33e-18!24;UBERON:0001557!3.33e-18!24;UBERON:0001042!3.33e-18!24;UBERON:0008814!3.33e-18!24;UBERON:0009145!3.33e-18!24;UBERON:0002405!6.34e-14!70;UBERON:0000063!6.88e-14!35;UBERON:0000065!2.25e-13!41;UBERON:0001004!5.45e-13!42;UBERON:0002384!3.58e-12!46;UBERON:0003081!2.67e-10!88;UBERON:0005057!3.46e-10!51|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.16e-13,1;UBERON:0001097,1.16e-13,1;UBERON:0003968,1.16e-13,1;UBERON:0001467,1.16e-13,1;UBERON:0002384,5.17e-10,46;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002370,2.66e-09,23;UBERON:0000974,2.66e-09,23;UBERON:0004807,2.66e-09,23;UBERON:0005058,2.66e-09,23;UBERON:0003351,2.66e-09,23;UBERON:0009113,2.66e-09,23;UBERON:0003295,2.66e-09,23;UBERON:0009722,2.66e-09,23;UBERON:0005562,2.66e-09,23;UBERON:0007690,2.66e-09,23;UBERON:0006562,6.22e-09,24;UBERON:0003408,6.22e-09,24;UBERON:0001557,6.22e-09,24;UBERON:0001042,6.22e-09,24;UBERON:0008814,6.22e-09,24;UBERON:0009145,6.22e-09,24;UBERON:0000072,5.51e-08,27;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0002390,2.79e-07,45;UBERON:0003061,2.79e-07,45|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,9.99599927276834,7.49006484230379,24.3129514880217,12.0455960082958,0.513602189793617,0.262261207256992,0,0,0.699561878128147,1.10411757875383,0.685572168028694,0.84877930359606,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.481059208201647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:35341591..35341599,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:35341591..35341599,- | |||
|id=chr17:35341591..35341599,- | |||
|ontology_enrichment_celltype=CL:0000084!1.50e-24!11;CL:0000827!1.50e-24!11;CL:0000791!1.76e-24!9;CL:0000789!1.76e-24!9;CL:0002420!1.76e-24!9;CL:0002419!1.76e-24!9;CL:0000790!1.76e-24!9;CL:0000838!2.22e-22!12;CL:0000624!2.29e-21!8;CL:0002031!2.30e-21!25;CL:0000893!3.02e-21!6;CL:0002489!3.02e-21!6;CL:0000898!3.02e-21!6;CL:0000809!3.02e-21!6;CL:0000810!3.02e-21!6;CL:0000895!3.02e-21!6;CL:0000808!3.02e-21!6;CL:0000894!3.02e-21!6;CL:0000806!3.02e-21!6;CL:0000807!3.02e-21!6;CL:0000805!3.02e-21!6;CL:0002425!3.02e-21!6;CL:0002436!3.02e-21!6;CL:0002427!3.02e-21!6;CL:0002428!3.02e-21!6;CL:0002429!3.02e-21!6;CL:0002433!3.02e-21!6;CL:0002431!3.02e-21!6;CL:0002432!3.02e-21!6;CL:0000542!1.53e-20!13;CL:0000051!1.53e-20!13;CL:0000988!9.82e-19!32;CL:0002032!9.82e-19!32;CL:0000037!9.82e-19!32;CL:0000566!9.82e-19!32;CL:0000837!9.82e-19!32;CL:0000738!2.39e-15!17;CL:0002087!2.39e-15!17;CL:0002320!3.58e-12!46;CL:0000134!3.58e-12!46;CL:0000219!5.95e-10!54;CL:0000553!1.21e-09!6;CL:0000556!1.21e-09!6;CL:0000063!6.73e-09!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.11e-39,8;CL:0000791,4.33e-35,9;CL:0000789,4.33e-35,9;CL:0002420,4.33e-35,9;CL:0002419,4.33e-35,9;CL:0000790,4.33e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,8.23e-29,11;CL:0000827,8.23e-29,11;CL:0000838,1.87e-26,12;CL:0000542,1.86e-24,13;CL:0000051,1.86e-24,13;CL:0000738,8.20e-19,17;CL:0002087,8.20e-19,17;CL:0002031,3.21e-18,25;CL:0000988,2.68e-14,32;CL:0002032,2.68e-14,32;CL:0000037,2.68e-14,32;CL:0000837,2.68e-14,32;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0002320,5.17e-10,46;CL:0000134,5.17e-10,46;CL:0000219,1.49e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.91e-22!48;UBERON:0002390!5.39e-21!45;UBERON:0003061!5.39e-21!45;UBERON:0004177!5.28e-20!29;UBERON:0002370!4.28e-19!23;UBERON:0000974!4.28e-19!23;UBERON:0004807!4.28e-19!23;UBERON:0005058!4.28e-19!23;UBERON:0003351!4.28e-19!23;UBERON:0009113!4.28e-19!23;UBERON:0003295!4.28e-19!23;UBERON:0009722!4.28e-19!23;UBERON:0005562!4.28e-19!23;UBERON:0007690!4.28e-19!23;UBERON:0000072!9.33e-19!27;UBERON:0006562!3.33e-18!24;UBERON:0003408!3.33e-18!24;UBERON:0001557!3.33e-18!24;UBERON:0001042!3.33e-18!24;UBERON:0008814!3.33e-18!24;UBERON:0009145!3.33e-18!24;UBERON:0002405!6.34e-14!70;UBERON:0000063!6.88e-14!35;UBERON:0000065!2.25e-13!41;UBERON:0001004!5.45e-13!42;UBERON:0002384!3.58e-12!46;UBERON:0003081!2.67e-10!88;UBERON:0005057!3.46e-10!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.16e-13,1;UBERON:0001097,1.16e-13,1;UBERON:0003968,1.16e-13,1;UBERON:0001467,1.16e-13,1;UBERON:0002384,5.17e-10,46;UBERON:0002193,1.28e-09,48;UBERON:0002405,1.28e-09,48;UBERON:0002370,2.66e-09,23;UBERON:0000974,2.66e-09,23;UBERON:0004807,2.66e-09,23;UBERON:0005058,2.66e-09,23;UBERON:0003351,2.66e-09,23;UBERON:0009113,2.66e-09,23;UBERON:0003295,2.66e-09,23;UBERON:0009722,2.66e-09,23;UBERON:0005562,2.66e-09,23;UBERON:0007690,2.66e-09,23;UBERON:0006562,6.22e-09,24;UBERON:0003408,6.22e-09,24;UBERON:0001557,6.22e-09,24;UBERON:0001042,6.22e-09,24;UBERON:0008814,6.22e-09,24;UBERON:0009145,6.22e-09,24;UBERON:0000072,5.51e-08,27;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0002390,2.79e-07,45;UBERON:0003061,2.79e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,9.99599927276834,7.49006484230379,24.3129514880217,12.0455960082958,0.513602189793617,0.262261207256992,0,0,0.699561878128147,1.10411757875383,0.685572168028694,0.84877930359606,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0.201652370273681,0.292373642219257,0.481059208201647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:35341591..35341599,- | |||
}} |
Revision as of 14:22, 13 September 2013
Short description: | p@chr17:35341591..35341599, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35341591..35341599, - |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.16e-13 | 1 |
axillary lymph node | 1.16e-13 | 1 |
peripheral lymph node | 1.16e-13 | 1 |
shoulder | 1.16e-13 | 1 |
connective tissue | 5.17e-10 | 46 |
hemolymphoid system | 1.28e-09 | 48 |
immune system | 1.28e-09 | 48 |
thymus | 2.66e-09 | 23 |
neck | 2.66e-09 | 23 |
respiratory system epithelium | 2.66e-09 | 23 |
hemolymphoid system gland | 2.66e-09 | 23 |
pharyngeal epithelium | 2.66e-09 | 23 |
thymic region | 2.66e-09 | 23 |
pharyngeal gland | 2.66e-09 | 23 |
entire pharyngeal arch endoderm | 2.66e-09 | 23 |
thymus primordium | 2.66e-09 | 23 |
early pharyngeal endoderm | 2.66e-09 | 23 |
pharynx | 6.22e-09 | 24 |
gland of gut | 6.22e-09 | 24 |
upper respiratory tract | 6.22e-09 | 24 |
chordate pharynx | 6.22e-09 | 24 |
pharyngeal arch system | 6.22e-09 | 24 |
pharyngeal region of foregut | 6.22e-09 | 24 |
segment of respiratory tract | 5.51e-08 | 27 |
hemopoietic organ | 1.84e-07 | 29 |
immune organ | 1.84e-07 | 29 |
hematopoietic system | 2.79e-07 | 45 |
blood island | 2.79e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.