FFCP PHASE1:Mm9::chr19:34266730..34266756,+: Difference between revisions
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|id=chr19:34266730..34266756,+ | |id=chr19:34266730..34266756,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.60e-08!12;CL:0000084!6.80e-08!11;CL:0000827!6.80e-08!11;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000791!6.91e-07!9;CL:0000789!6.91e-07!9;CL:0002420!6.91e-07!9;CL:0002419!6.91e-07!9;CL:0000790!6.91e-07!9 | |ontology_enrichment_celltype=CL:0000838!2.60e-08!12;CL:0000084!6.80e-08!11;CL:0000827!6.80e-08!11;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000791!6.91e-07!9;CL:0000789!6.91e-07!9;CL:0002420!6.91e-07!9;CL:0002419!6.91e-07!9;CL:0000790!6.91e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.60e-08,12;CL:0000084,6.78e-08,11;CL:0000827,6.78e-08,11;CL:0000542,5.82e-07,13;CL:0000051,5.82e-07,13;CL:0000791,6.89e-07,9;CL:0000789,6.89e-07,9;CL:0002420,6.89e-07,9;CL:0002419,6.89e-07,9;CL:0000790,6.89e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.06e-09!24;UBERON:0002370!4.83e-09!23;UBERON:0000974!4.83e-09!23;UBERON:0004807!4.83e-09!23;UBERON:0005058!4.83e-09!23;UBERON:0003351!4.83e-09!23;UBERON:0009113!4.83e-09!23;UBERON:0003295!4.83e-09!23;UBERON:0009722!4.83e-09!23;UBERON:0005562!4.83e-09!23;UBERON:0007690!4.83e-09!23;UBERON:0006562!1.80e-08!24;UBERON:0001557!1.80e-08!24;UBERON:0001042!1.80e-08!24;UBERON:0008814!1.80e-08!24;UBERON:0009145!1.80e-08!24;UBERON:0002193!1.33e-07!48;UBERON:0004177!1.41e-07!29;UBERON:0000072!2.85e-07!27;UBERON:0002390!9.14e-07!45;UBERON:0003061!9.14e-07!45 | |ontology_enrichment_uberon=UBERON:0003408!4.06e-09!24;UBERON:0002370!4.83e-09!23;UBERON:0000974!4.83e-09!23;UBERON:0004807!4.83e-09!23;UBERON:0005058!4.83e-09!23;UBERON:0003351!4.83e-09!23;UBERON:0009113!4.83e-09!23;UBERON:0003295!4.83e-09!23;UBERON:0009722!4.83e-09!23;UBERON:0005562!4.83e-09!23;UBERON:0007690!4.83e-09!23;UBERON:0006562!1.80e-08!24;UBERON:0001557!1.80e-08!24;UBERON:0001042!1.80e-08!24;UBERON:0008814!1.80e-08!24;UBERON:0009145!1.80e-08!24;UBERON:0002193!1.33e-07!48;UBERON:0004177!1.41e-07!29;UBERON:0000072!2.85e-07!27;UBERON:0002390!9.14e-07!45;UBERON:0003061!9.14e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.73e-09,24;UBERON:0002370,4.43e-09,23;UBERON:0000974,4.43e-09,23;UBERON:0004807,4.43e-09,23;UBERON:0005058,4.43e-09,23;UBERON:0003351,4.43e-09,23;UBERON:0009113,4.43e-09,23;UBERON:0003295,4.43e-09,23;UBERON:0009722,4.43e-09,23;UBERON:0005562,4.43e-09,23;UBERON:0007690,4.43e-09,23;UBERON:0006562,1.66e-08,24;UBERON:0001557,1.66e-08,24;UBERON:0001042,1.66e-08,24;UBERON:0008814,1.66e-08,24;UBERON:0009145,1.66e-08,24;UBERON:0002193,1.19e-07,48;UBERON:0002405,1.19e-07,48;UBERON:0004177,1.31e-07,29;UBERON:0005057,1.31e-07,29;UBERON:0000072,2.66e-07,27;UBERON:0000077,5.63e-07,35;UBERON:0002390,8.21e-07,45;UBERON:0003061,8.21e-07,45 | |||
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| ||
|short_description=p1@Stambpl1 | |short_description=p1@Stambpl1 | ||
}} | }} |
Revision as of 18:49, 14 November 2012
Short description: | p1@Stambpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stambpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -3bp_to_NM_029682, uc008hgc.1_5end |
EntrezGene: | Stambpl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.60e-08 | 12 |
T cell | 6.78e-08 | 11 |
pro-T cell | 6.78e-08 | 11 |
lymphocyte | 5.82e-07 | 13 |
common lymphoid progenitor | 5.82e-07 | 13 |
mature alpha-beta T cell | 6.89e-07 | 9 |
alpha-beta T cell | 6.89e-07 | 9 |
immature T cell | 6.89e-07 | 9 |
mature T cell | 6.89e-07 | 9 |
immature alpha-beta T cell | 6.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 3.73e-09 | 24 |
thymus | 4.43e-09 | 23 |
neck | 4.43e-09 | 23 |
respiratory system epithelium | 4.43e-09 | 23 |
hemolymphoid system gland | 4.43e-09 | 23 |
pharyngeal epithelium | 4.43e-09 | 23 |
thymic region | 4.43e-09 | 23 |
pharyngeal gland | 4.43e-09 | 23 |
entire pharyngeal arch endoderm | 4.43e-09 | 23 |
thymus primordium | 4.43e-09 | 23 |
early pharyngeal endoderm | 4.43e-09 | 23 |
pharynx | 1.66e-08 | 24 |
upper respiratory tract | 1.66e-08 | 24 |
chordate pharynx | 1.66e-08 | 24 |
pharyngeal arch system | 1.66e-08 | 24 |
pharyngeal region of foregut | 1.66e-08 | 24 |
hemolymphoid system | 1.19e-07 | 48 |
immune system | 1.19e-07 | 48 |
hemopoietic organ | 1.31e-07 | 29 |
immune organ | 1.31e-07 | 29 |
segment of respiratory tract | 2.66e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 5.63e-07 | 35 |
hematopoietic system | 8.21e-07 | 45 |
blood island | 8.21e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.