FFCP PHASE1:Mm9::chr17:31701800..31701818,+: Difference between revisions
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|id=chr17:31701800..31701818,+ | |id=chr17:31701800..31701818,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.75e-08!12;CL:0000542!5.25e-08!13;CL:0000051!5.25e-08!13;CL:0000084!7.87e-08!11;CL:0000827!7.87e-08!11;CL:0000791!5.58e-07!9;CL:0000789!5.58e-07!9;CL:0002420!5.58e-07!9;CL:0002419!5.58e-07!9;CL:0000790!5.58e-07!9 | |ontology_enrichment_celltype=CL:0000838!1.75e-08!12;CL:0000542!5.25e-08!13;CL:0000051!5.25e-08!13;CL:0000084!7.87e-08!11;CL:0000827!7.87e-08!11;CL:0000791!5.58e-07!9;CL:0000789!5.58e-07!9;CL:0002420!5.58e-07!9;CL:0002419!5.58e-07!9;CL:0000790!5.58e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.22e-08,12;CL:0000542,3.75e-08,13;CL:0000051,3.75e-08,13;CL:0000084,5.67e-08,11;CL:0000827,5.67e-08,11;CL:0000791,4.20e-07,9;CL:0000789,4.20e-07,9;CL:0002420,4.20e-07,9;CL:0002419,4.20e-07,9;CL:0000790,4.20e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.09e-08!29;UBERON:0006562!2.50e-08!24;UBERON:0001557!2.50e-08!24;UBERON:0001042!2.50e-08!24;UBERON:0008814!2.50e-08!24;UBERON:0009145!2.50e-08!24;UBERON:0002370!3.94e-08!23;UBERON:0000974!3.94e-08!23;UBERON:0004807!3.94e-08!23;UBERON:0005058!3.94e-08!23;UBERON:0003351!3.94e-08!23;UBERON:0009113!3.94e-08!23;UBERON:0003295!3.94e-08!23;UBERON:0009722!3.94e-08!23;UBERON:0005562!3.94e-08!23;UBERON:0007690!3.94e-08!23;UBERON:0000065!6.45e-08!41;UBERON:0001004!2.57e-07!42;UBERON:0003408!2.85e-07!24;UBERON:0005911!6.17e-07!69 | |ontology_enrichment_uberon=UBERON:0004177!2.09e-08!29;UBERON:0006562!2.50e-08!24;UBERON:0001557!2.50e-08!24;UBERON:0001042!2.50e-08!24;UBERON:0008814!2.50e-08!24;UBERON:0009145!2.50e-08!24;UBERON:0002370!3.94e-08!23;UBERON:0000974!3.94e-08!23;UBERON:0004807!3.94e-08!23;UBERON:0005058!3.94e-08!23;UBERON:0003351!3.94e-08!23;UBERON:0009113!3.94e-08!23;UBERON:0003295!3.94e-08!23;UBERON:0009722!3.94e-08!23;UBERON:0005562!3.94e-08!23;UBERON:0007690!3.94e-08!23;UBERON:0000065!6.45e-08!41;UBERON:0001004!2.57e-07!42;UBERON:0003408!2.85e-07!24;UBERON:0005911!6.17e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,6.35e-09,24;UBERON:0001557,6.35e-09,24;UBERON:0001042,6.35e-09,24;UBERON:0008814,6.35e-09,24;UBERON:0009145,6.35e-09,24;UBERON:0004177,8.00e-09,29;UBERON:0005057,8.00e-09,29;UBERON:0002370,1.01e-08,23;UBERON:0000974,1.01e-08,23;UBERON:0004807,1.01e-08,23;UBERON:0005058,1.01e-08,23;UBERON:0003351,1.01e-08,23;UBERON:0009113,1.01e-08,23;UBERON:0003295,1.01e-08,23;UBERON:0009722,1.01e-08,23;UBERON:0005562,1.01e-08,23;UBERON:0007690,1.01e-08,23;UBERON:0000065,2.27e-08,41;UBERON:0000153,2.45e-08,43;UBERON:0003408,8.21e-08,24;UBERON:0001004,9.66e-08,42;UBERON:0007811,2.41e-07,36;UBERON:0000077,2.48e-07,35;UBERON:0005911,2.91e-07,69;UBERON:0002193,4.94e-07,48;UBERON:0002405,4.94e-07,48 | |||
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| ||
|short_description=p2@Pknox1 | |short_description=p2@Pknox1 | ||
}} | }} |
Revision as of 23:36, 14 November 2012
Short description: | p2@Pknox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pknox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 82bp_to_ENSMUST00000097352, NM_016670, NR_027493, uc008bvh.2, uc008bvi.2_5end |
EntrezGene: | Pknox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.22e-08 | 12 |
lymphocyte | 3.75e-08 | 13 |
common lymphoid progenitor | 3.75e-08 | 13 |
T cell | 5.67e-08 | 11 |
pro-T cell | 5.67e-08 | 11 |
mature alpha-beta T cell | 4.20e-07 | 9 |
alpha-beta T cell | 4.20e-07 | 9 |
immature T cell | 4.20e-07 | 9 |
mature T cell | 4.20e-07 | 9 |
immature alpha-beta T cell | 4.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pharynx | 6.35e-09 | 24 |
upper respiratory tract | 6.35e-09 | 24 |
chordate pharynx | 6.35e-09 | 24 |
pharyngeal arch system | 6.35e-09 | 24 |
pharyngeal region of foregut | 6.35e-09 | 24 |
hemopoietic organ | 8.00e-09 | 29 |
immune organ | 8.00e-09 | 29 |
thymus | 1.01e-08 | 23 |
neck | 1.01e-08 | 23 |
respiratory system epithelium | 1.01e-08 | 23 |
hemolymphoid system gland | 1.01e-08 | 23 |
pharyngeal epithelium | 1.01e-08 | 23 |
thymic region | 1.01e-08 | 23 |
pharyngeal gland | 1.01e-08 | 23 |
entire pharyngeal arch endoderm | 1.01e-08 | 23 |
thymus primordium | 1.01e-08 | 23 |
early pharyngeal endoderm | 1.01e-08 | 23 |
respiratory tract | 2.27e-08 | 41 |
anterior region of body | 2.45e-08 | 43 |
gland of gut | 8.21e-08 | 24 |
respiratory system | 9.66e-08 | 42 |
craniocervical region | 2.41e-07 | 36 |
mixed endoderm/mesoderm-derived structure | 2.48e-07 | 35 |
endo-epithelium | 2.91e-07 | 69 |
hemolymphoid system | 4.94e-07 | 48 |
immune system | 4.94e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.