FFCP PHASE1:Mm9::chr5:120566489..120566534,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:120566489..120566534,+ | |id=chr5:120566489..120566534,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.15e-08!29;UBERON:0002370!2.75e-08!23;UBERON:0000974!2.75e-08!23;UBERON:0004807!2.75e-08!23;UBERON:0005058!2.75e-08!23;UBERON:0003351!2.75e-08!23;UBERON:0009113!2.75e-08!23;UBERON:0003295!2.75e-08!23;UBERON:0009722!2.75e-08!23;UBERON:0005562!2.75e-08!23;UBERON:0007690!2.75e-08!23;UBERON:0006562!5.76e-08!24;UBERON:0001557!5.76e-08!24;UBERON:0001042!5.76e-08!24;UBERON:0008814!5.76e-08!24;UBERON:0009145!5.76e-08!24;UBERON:0002323!7.30e-08!37;UBERON:0004458!7.30e-08!37;UBERON:0003408!2.00e-07!24;UBERON:0003886!2.64e-07!38;UBERON:0001048!6.36e-07!147;UBERON:0002390!9.33e-07!45;UBERON:0003061!9.33e-07!45 | |ontology_enrichment_uberon=UBERON:0004177!1.15e-08!29;UBERON:0002370!2.75e-08!23;UBERON:0000974!2.75e-08!23;UBERON:0004807!2.75e-08!23;UBERON:0005058!2.75e-08!23;UBERON:0003351!2.75e-08!23;UBERON:0009113!2.75e-08!23;UBERON:0003295!2.75e-08!23;UBERON:0009722!2.75e-08!23;UBERON:0005562!2.75e-08!23;UBERON:0007690!2.75e-08!23;UBERON:0006562!5.76e-08!24;UBERON:0001557!5.76e-08!24;UBERON:0001042!5.76e-08!24;UBERON:0008814!5.76e-08!24;UBERON:0009145!5.76e-08!24;UBERON:0002323!7.30e-08!37;UBERON:0004458!7.30e-08!37;UBERON:0003408!2.00e-07!24;UBERON:0003886!2.64e-07!38;UBERON:0001048!6.36e-07!147;UBERON:0002390!9.33e-07!45;UBERON:0003061!9.33e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.15e-08,29;UBERON:0005057,1.15e-08,29;UBERON:0002370,2.75e-08,23;UBERON:0000974,2.75e-08,23;UBERON:0004807,2.75e-08,23;UBERON:0005058,2.75e-08,23;UBERON:0003351,2.75e-08,23;UBERON:0009113,2.75e-08,23;UBERON:0003295,2.75e-08,23;UBERON:0009722,2.75e-08,23;UBERON:0005562,2.75e-08,23;UBERON:0007690,2.75e-08,23;UBERON:0006562,5.76e-08,24;UBERON:0001557,5.76e-08,24;UBERON:0001042,5.76e-08,24;UBERON:0008814,5.76e-08,24;UBERON:0009145,5.76e-08,24;UBERON:0002323,7.30e-08,37;UBERON:0004458,7.30e-08,37;UBERON:0003408,2.00e-07,24;UBERON:0003886,2.64e-07,38;UBERON:0002390,9.33e-07,45;UBERON:0003061,9.33e-07,45 | |||
|phase1_expression=7.36684696682052,2.44282785347553,1.81999695755814,1.51232105653415,1.00179145989269,10.2406355866253,10.5125688267987,13.1705789910408,25.6235474316033,29.4921303165712,40.4074405012192,41.960155631547,17.8048759128454,19.8444313491124,18.3210368998615,12.3509913107794,12.5921138063066,20.6627718309646,20.8413939080723,14.429248161133,12.6714502325094,9.92909512008853,8.35839325244593,7.67963629408352,5.04700418347774,1.72269589234506,3.4460959692726,4.09395342103189,6.08074942260396,5.79669298447841,4.43461021310609,29.8464416526027,24.6025915033828,15.8481681015439,15.3091358468176,15.6260566636983,11.8418226632174,0.837063261473815,1.5626706890476,2.61761871986899,1.17646297606203,0,0.485510353031154,7.93149953246137,10.3404469843905,9.36088436024576,9.38869613217647,6.75877984779384,12.5221124158649,6.41618666945135,5.5994568650145,20.125359011096,21.3083909693325,23.211588544363,18.1490651536931,8.48956138918625,9.74213695791773,6.70373719960675,13.5552028775931,10.5798195854407,16.4796164911607,15.5868484751801,15.1180115338894,10.3488467487361,12.8552627133707,10.6572017241915,6.89080254192331,8.06858441175265,13.3759599877936,15.1206650931494,11.7781978356774,13.4255962669788,10.8225585066291,11.7591167246356,12.7474476454254,13.7882817991503,9.91042928994498,9.83192503255945,7.83393319606842,12.924856197559,10.9785172322892,16.1483144872596,6.70039197603314,7.87867654044352,7.79271063661732,7.95497180778903,13.2405663143166,12.4887628702951,28.2458701132777,11.9403064968721,16.232411367294,3.44169550792555,14.2793980078628,3.77792234146472,7.14754059192436,5.37632264516803,7.8648875273781,5.28333999991979,6.75443611967459,7.77347063922748,9.01397886570755,10.2661181931454,20.3844191765317,14.2213340630666,12.123498296628,8.10751569520315,8.59391556525132,6.50848114398642,16.0541487861246,9.20341262201914,11.450031566565,7.30717147949139,11.5307748628029,8.59119051149949,9.7598626922635,9.04799457573663,4.94389935468748,5.78397427679647,8.84610551949874,10.5148452465816,9.71702681225732,10.1823803158397,7.45567044872489,10.8328894894272,13.1951425292477,8.43008282188352,19.8893106679828,8.39863823390771,17.4086211090099,7.78911324905078,5.94750783664214,10.5549655774806,7.12679712788333,9.2057564638919,7.48036960414416,7.78758062725237,12.8317598451399,9.08170885453679,8.08712826987759,8.20723237957248,13.7927669540466,13.5642241615749,11.5239763075424,12.6592046982001,14.0835553243249,11.7864622662062,12.9308379892426,7.76110112217047,20.47895932862,16.0740168142646,14.2520410572799,11.1789823538063,13.6243152120543,9.75106066262066,6.99659263787008,14.7285357445685,4.21327912387941,7.97778512055617,10.7982129770325,12.4275463521301,12.6644072389792,15.1252131627252,9.70653415899362,11.8058539048442,10.9529650150039,9.30135779001631,12.8771232671817,10.7424114977796,15.4686258918672,9.35754545250843,8.431156192769,9.0643992203706,7.46470391989572,7.24714661306008,6.51898840548794,8.54108282748061,2.64335026387038,8.46241813323342,16.6364835417482,16.953277045812,15.0774929746849,14.117846723634,9.11749979763968,9.51128130562796,10.9141684155238,9.0584425098206,8.79673230800943,11.5394753783867,8.38345574612217,12.5834717211591,8.21324589523838,7.76650965692032,10.8110703543257,14.8523066392647,9.01661885384643,12.0154283428735,13.1887691273986,12.6244475802573,11.7619959051119,10.0374900626129,11.9319033159445,9.13139013021324,9.78293669387591,21.35617353166,18.0834275504147,15.5154857545549,15.0116489827492,11.576503668116,8.40265310878685,9.78166867332756,8.2688965655268,11.2570179407113,7.18841032636773,8.93138274404408,9.04909252032226,10.6083128737787,8.96987067609561,8.68398338454061,8.31389355749721,14.4013472945568,14.9927778326664,12.9006265189143,12.9079636558676,11.3904255060435,6.9032655856944,9.56154874503214,10.2462843669024,9.08005227559977,9.24837658213425,9.5040722535128,10.7064688756855,8.10034728056465,3.01582567878545,13.053736411649,11.8023425524569,10.7615331058846,6.90367536947505,8.20481806145422,13.114795630134,10.6037789425837,7.57219726599016,12.4940398174924,7.32439552291516,12.4263774935327,8.24355094104858,9.6246020468203,10.1202675418724,8.76767573733936,11.0680577825027,8.03303291054518,10.5035663054119,15.6697731227185,10.2618784392753,12.2077890999676,13.2745138339963,20.3935734370184,18.7440605318146,11.8821200246216,16.2416041084425,12.604841065701,14.2135561242522,13.0872142611902,15.329387270543,18.962205476149,13.7044191147498,17.5330423521918,7.14923172082955,14.4048875225048,12.5477923269272,11.574199891706,10.2857335512519,12.1290795969408,9.70839221552514,14.0053876592716,11.9682571112492,5.50763384245932,8.38007912608855,11.3771514529621,10.333723308538,10.3135101627147,12.1759790883199,12.4747083806247,9.91034844541493,8.15871328846243,11.4483490134561,13.6215332855727,14.2599786074678,11.3021074202815,13.9428112275446,12.8115776995653,12.4084253895514,14.2750481370131,12.0233977209849,1.90934123603023,15.6586316822662,14.4356821660063,13.1766515802598,10.245326504709,8.7345025498471,8.36158947585888,9.33984049696296,8.89970202745701,8.68420321055012,7.45607175704311,20.2929457926309,16.7458531569256,13.7330547079391,14.1949367491155,14.4659002295059,15.5439635451516,14.9043693080108,19.7910664962804,18.4552446189251,19.5683137869065,19.0099804130191,11.3764003426144,16.015292007923,14.3795340030758,13.1220031207573,13.6060288707286,14.5037388990323,15.1446266395161,14.0305050815848,14.9430345923258,15.54618855762,16.5354943624418,11.5000299272908,14.5279880876897,13.0902130443357,10.4295976462997,21.5326374772843,34.6295486512576,22.1607693600584,8.30715254338419,12.9500908061316,10.9890974560359,8.57473516316263,4.01257683228291,5.0827665835536,11.0478056761722,10.3121192419091,9.28007184655913,3.42541259885321,6.0431511791176,6.07520250208625,8.55610286126019,9.06284817968409,8.80192529978094,14.4264413142006,15.9609949360412,14.8538237006097,9.23805524859517,12.5767897576789,10.4790799816508,8.22312892865976,8.44743734679466,9.94849549734627,9.8551912587881,5.83002389747551,9.24269072791773,12.4543204934944,8.70742072706222,13.1527223908354,13.8125170472091,12.7472758539341,12.7320085506045,13.1867488257058,9.86232764900462,8.9146005620208,13.3106854619503,14.0677352068919,11.6277133305863,11.387235030255,13.1152642232099,10.426894453748,13.41655528333,12.4939784738193,9.53941861818155,10.0839765405548,13.2981051207011,10.6400071224119,10.0708946770878,10.4169569929816,9.99242311751784,8.4215379040347,10.5286816483666,8.22539827896026,9.70602244125868,7.88350641109433 | |phase1_expression=7.36684696682052,2.44282785347553,1.81999695755814,1.51232105653415,1.00179145989269,10.2406355866253,10.5125688267987,13.1705789910408,25.6235474316033,29.4921303165712,40.4074405012192,41.960155631547,17.8048759128454,19.8444313491124,18.3210368998615,12.3509913107794,12.5921138063066,20.6627718309646,20.8413939080723,14.429248161133,12.6714502325094,9.92909512008853,8.35839325244593,7.67963629408352,5.04700418347774,1.72269589234506,3.4460959692726,4.09395342103189,6.08074942260396,5.79669298447841,4.43461021310609,29.8464416526027,24.6025915033828,15.8481681015439,15.3091358468176,15.6260566636983,11.8418226632174,0.837063261473815,1.5626706890476,2.61761871986899,1.17646297606203,0,0.485510353031154,7.93149953246137,10.3404469843905,9.36088436024576,9.38869613217647,6.75877984779384,12.5221124158649,6.41618666945135,5.5994568650145,20.125359011096,21.3083909693325,23.211588544363,18.1490651536931,8.48956138918625,9.74213695791773,6.70373719960675,13.5552028775931,10.5798195854407,16.4796164911607,15.5868484751801,15.1180115338894,10.3488467487361,12.8552627133707,10.6572017241915,6.89080254192331,8.06858441175265,13.3759599877936,15.1206650931494,11.7781978356774,13.4255962669788,10.8225585066291,11.7591167246356,12.7474476454254,13.7882817991503,9.91042928994498,9.83192503255945,7.83393319606842,12.924856197559,10.9785172322892,16.1483144872596,6.70039197603314,7.87867654044352,7.79271063661732,7.95497180778903,13.2405663143166,12.4887628702951,28.2458701132777,11.9403064968721,16.232411367294,3.44169550792555,14.2793980078628,3.77792234146472,7.14754059192436,5.37632264516803,7.8648875273781,5.28333999991979,6.75443611967459,7.77347063922748,9.01397886570755,10.2661181931454,20.3844191765317,14.2213340630666,12.123498296628,8.10751569520315,8.59391556525132,6.50848114398642,16.0541487861246,9.20341262201914,11.450031566565,7.30717147949139,11.5307748628029,8.59119051149949,9.7598626922635,9.04799457573663,4.94389935468748,5.78397427679647,8.84610551949874,10.5148452465816,9.71702681225732,10.1823803158397,7.45567044872489,10.8328894894272,13.1951425292477,8.43008282188352,19.8893106679828,8.39863823390771,17.4086211090099,7.78911324905078,5.94750783664214,10.5549655774806,7.12679712788333,9.2057564638919,7.48036960414416,7.78758062725237,12.8317598451399,9.08170885453679,8.08712826987759,8.20723237957248,13.7927669540466,13.5642241615749,11.5239763075424,12.6592046982001,14.0835553243249,11.7864622662062,12.9308379892426,7.76110112217047,20.47895932862,16.0740168142646,14.2520410572799,11.1789823538063,13.6243152120543,9.75106066262066,6.99659263787008,14.7285357445685,4.21327912387941,7.97778512055617,10.7982129770325,12.4275463521301,12.6644072389792,15.1252131627252,9.70653415899362,11.8058539048442,10.9529650150039,9.30135779001631,12.8771232671817,10.7424114977796,15.4686258918672,9.35754545250843,8.431156192769,9.0643992203706,7.46470391989572,7.24714661306008,6.51898840548794,8.54108282748061,2.64335026387038,8.46241813323342,16.6364835417482,16.953277045812,15.0774929746849,14.117846723634,9.11749979763968,9.51128130562796,10.9141684155238,9.0584425098206,8.79673230800943,11.5394753783867,8.38345574612217,12.5834717211591,8.21324589523838,7.76650965692032,10.8110703543257,14.8523066392647,9.01661885384643,12.0154283428735,13.1887691273986,12.6244475802573,11.7619959051119,10.0374900626129,11.9319033159445,9.13139013021324,9.78293669387591,21.35617353166,18.0834275504147,15.5154857545549,15.0116489827492,11.576503668116,8.40265310878685,9.78166867332756,8.2688965655268,11.2570179407113,7.18841032636773,8.93138274404408,9.04909252032226,10.6083128737787,8.96987067609561,8.68398338454061,8.31389355749721,14.4013472945568,14.9927778326664,12.9006265189143,12.9079636558676,11.3904255060435,6.9032655856944,9.56154874503214,10.2462843669024,9.08005227559977,9.24837658213425,9.5040722535128,10.7064688756855,8.10034728056465,3.01582567878545,13.053736411649,11.8023425524569,10.7615331058846,6.90367536947505,8.20481806145422,13.114795630134,10.6037789425837,7.57219726599016,12.4940398174924,7.32439552291516,12.4263774935327,8.24355094104858,9.6246020468203,10.1202675418724,8.76767573733936,11.0680577825027,8.03303291054518,10.5035663054119,15.6697731227185,10.2618784392753,12.2077890999676,13.2745138339963,20.3935734370184,18.7440605318146,11.8821200246216,16.2416041084425,12.604841065701,14.2135561242522,13.0872142611902,15.329387270543,18.962205476149,13.7044191147498,17.5330423521918,7.14923172082955,14.4048875225048,12.5477923269272,11.574199891706,10.2857335512519,12.1290795969408,9.70839221552514,14.0053876592716,11.9682571112492,5.50763384245932,8.38007912608855,11.3771514529621,10.333723308538,10.3135101627147,12.1759790883199,12.4747083806247,9.91034844541493,8.15871328846243,11.4483490134561,13.6215332855727,14.2599786074678,11.3021074202815,13.9428112275446,12.8115776995653,12.4084253895514,14.2750481370131,12.0233977209849,1.90934123603023,15.6586316822662,14.4356821660063,13.1766515802598,10.245326504709,8.7345025498471,8.36158947585888,9.33984049696296,8.89970202745701,8.68420321055012,7.45607175704311,20.2929457926309,16.7458531569256,13.7330547079391,14.1949367491155,14.4659002295059,15.5439635451516,14.9043693080108,19.7910664962804,18.4552446189251,19.5683137869065,19.0099804130191,11.3764003426144,16.015292007923,14.3795340030758,13.1220031207573,13.6060288707286,14.5037388990323,15.1446266395161,14.0305050815848,14.9430345923258,15.54618855762,16.5354943624418,11.5000299272908,14.5279880876897,13.0902130443357,10.4295976462997,21.5326374772843,34.6295486512576,22.1607693600584,8.30715254338419,12.9500908061316,10.9890974560359,8.57473516316263,4.01257683228291,5.0827665835536,11.0478056761722,10.3121192419091,9.28007184655913,3.42541259885321,6.0431511791176,6.07520250208625,8.55610286126019,9.06284817968409,8.80192529978094,14.4264413142006,15.9609949360412,14.8538237006097,9.23805524859517,12.5767897576789,10.4790799816508,8.22312892865976,8.44743734679466,9.94849549734627,9.8551912587881,5.83002389747551,9.24269072791773,12.4543204934944,8.70742072706222,13.1527223908354,13.8125170472091,12.7472758539341,12.7320085506045,13.1867488257058,9.86232764900462,8.9146005620208,13.3106854619503,14.0677352068919,11.6277133305863,11.387235030255,13.1152642232099,10.426894453748,13.41655528333,12.4939784738193,9.53941861818155,10.0839765405548,13.2981051207011,10.6400071224119,10.0708946770878,10.4169569929816,9.99242311751784,8.4215379040347,10.5286816483666,8.22539827896026,9.70602244125868,7.88350641109433 | ||
|short_description=p1@Rbm19 | |short_description=p1@Rbm19 | ||
}} | }} |
Revision as of 06:17, 15 November 2012
Short description: | p1@Rbm19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm19_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000031590, ENSMUST00000111903, NM_028762, uc008zha.1, uc012ecm.1_5end |
EntrezGene: | Rbm19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.15e-08 | 29 |
immune organ | 1.15e-08 | 29 |
thymus | 2.75e-08 | 23 |
neck | 2.75e-08 | 23 |
respiratory system epithelium | 2.75e-08 | 23 |
hemolymphoid system gland | 2.75e-08 | 23 |
pharyngeal epithelium | 2.75e-08 | 23 |
thymic region | 2.75e-08 | 23 |
pharyngeal gland | 2.75e-08 | 23 |
entire pharyngeal arch endoderm | 2.75e-08 | 23 |
thymus primordium | 2.75e-08 | 23 |
early pharyngeal endoderm | 2.75e-08 | 23 |
pharynx | 5.76e-08 | 24 |
upper respiratory tract | 5.76e-08 | 24 |
chordate pharynx | 5.76e-08 | 24 |
pharyngeal arch system | 5.76e-08 | 24 |
pharyngeal region of foregut | 5.76e-08 | 24 |
body cavity | 7.30e-08 | 37 |
body cavity or lining | 7.30e-08 | 37 |
gland of gut | 2.00e-07 | 24 |
body cavity precursor | 2.64e-07 | 38 |
hematopoietic system | 9.33e-07 | 45 |
blood island | 9.33e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.