FFCP PHASE1:Mm9::chr9:30939365..30939399,-: Difference between revisions
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|id=chr9:30939365..30939399,- | |id=chr9:30939365..30939399,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.83e-07,9;CL:0002251,5.83e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.93e-22!59;UBERON:0000160!3.26e-21!43;UBERON:0004119!5.72e-15!130;UBERON:0000925!5.72e-15!130;UBERON:0006595!5.72e-15!130;UBERON:0001007!1.20e-14!128;UBERON:0001555!1.20e-14!128;UBERON:0007026!1.20e-14!128;UBERON:0004921!1.30e-13!126;UBERON:0004185!1.30e-13!126;UBERON:0000344!2.55e-10!15;UBERON:0001242!4.14e-09!13;UBERON:0000060!4.14e-09!13;UBERON:0001262!4.14e-09!13;UBERON:0004786!4.14e-09!13;UBERON:0004923!1.45e-07!24;UBERON:0002108!3.76e-07!16 | |ontology_enrichment_uberon=UBERON:0005409!2.93e-22!59;UBERON:0000160!3.26e-21!43;UBERON:0004119!5.72e-15!130;UBERON:0000925!5.72e-15!130;UBERON:0006595!5.72e-15!130;UBERON:0001007!1.20e-14!128;UBERON:0001555!1.20e-14!128;UBERON:0007026!1.20e-14!128;UBERON:0004921!1.30e-13!126;UBERON:0004185!1.30e-13!126;UBERON:0000344!2.55e-10!15;UBERON:0001242!4.14e-09!13;UBERON:0000060!4.14e-09!13;UBERON:0001262!4.14e-09!13;UBERON:0004786!4.14e-09!13;UBERON:0004923!1.45e-07!24;UBERON:0002108!3.76e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.13e-18,31;UBERON:0005409,4.86e-18,47;UBERON:0004119,2.39e-11,118;UBERON:0000925,2.39e-11,118;UBERON:0006595,2.39e-11,118;UBERON:0001007,4.69e-11,116;UBERON:0001555,4.69e-11,116;UBERON:0007026,4.69e-11,116;UBERON:0000344,5.46e-11,15;UBERON:0004921,4.08e-10,114;UBERON:0001242,1.09e-09,13;UBERON:0001262,1.09e-09,13;UBERON:0004786,1.09e-09,13;UBERON:0004923,5.10e-07,24;UBERON:0003350,5.83e-07,9;UBERON:0004808,5.83e-07,9;UBERON:0001277,5.83e-07,9;UBERON:0000485,7.73e-07,11 | |||
|phase1_expression=4.16387002472464,234.86044934129,222.949627300873,123.707862424493,175.313505481222,58.5898658972495,51.3947809310156,0.129123323441576,0,0,0,0,0.171200729931206,0,1.33243904726265,1.21485160433896,0,4.73193248037357,3.56497527374921,2.97072756258621,12.246233781754,1.58865521921416,0.261199789138935,66.3968554592638,87.634345367659,164.230341736896,122.336406909177,109.459386204432,84.37039823863,75.3570087982193,80.9316363891862,0,0,0,31.1959749331377,30.9196440366796,37.7713309085383,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,1.43752564364972,2.51673909086605,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,11.0148505706638,0.860423876981386,0,0,0,0,9.55022056895913,0,0,0,9.29566570526091,0,0,0,33.9890934387606,45.8581356509928,36.9032844860792,26.9473956136982,2.33044095282455,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,46.967043869531,0.289198713839823,0,0.161766849947409,0,0,76.4206220994301,0.292780797011547,0,85.8335705500867,0.479260498023681,0,0.635351135365324,0,0,0,0,0,0,0,4.9901288286655,10.4501855312478,34.6230179054134,16.2040229032585,1.82168620147785,0.689706313300419,0.360124259610698,2.10986744970001,1.49680298132921,1.15302348256365,2.06143794031403,3.62184719034622,3.44908788692548,0.945530400839096,1.05570674498369,1.7535658594206,4.17070873838397,3.83077383174383,6.1734640922383,1.99034266818493,0.702213187313235,1.28673953557358,0.568326998791185,0.207125772535502,0.703578179943289,0,0.946978942340841,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,191.312475347619,119.002754998595,4.26576501070468,6.96710015581316,22.5518057313663,25.2104405779178,29.131523743678,35.7624177091611,72.6029464163103,51.0566759644434,33.6789179792361,39.592337936189,37.4331047268711,74.6020109183004,73.486936957396,81.4487807610362,5.69003702859245,5.36968009265725,4.50830942692322,8.14605311381257,8.53390943537553,10.3801013437671,17.2635746349222,24.2080642686548,22.2938193534752,25.5432129318127,1.1858105083486,0.333690211432188,0,0.224862112384854,0,0,1.52775511068852,0.863088412352432,0.324270453550071,1.09824565275233,0,2.23284568601102,0.624075346229121,0.505157755894224,0.538192240565737,0,10.1614254591633,4.16881105895066,7.00749398700711,7.63852885988347,11.2651319178481,11.8929442783689,15.2347930167049,21.8549685600735,9.14283835815908,4.20782910332672,9.08892181347676,9.66793556822854,11.2245238212832,13.1630643309176,0,0,97.3693260577692,68.7082498298784,0.160550589987792,0,0,0,0.315508219416257,0,0,0.477937595905104,0.668396022247182,0.283076530788832,0,1.46127928955656,0.790575555893047,0,5.39372323791421,3.73937767701236,4.39794790254655,21.6110861094021,14.6019652173959,23.3069410708782,25.0928552280743,16.597247018519,16.2416041084425,14.1420168054207,28.6855405416725,14.5413491791002,13.9033977570041,12.009396801561,13.7044191147498,15.470331487228,9.19186935535228,5.04171063287669,7.1147276080515,6.00143698088458,5.32020700926821,5.70780216326626,4.44282355625727,5.48036908406279,3.75474732901937,8.47328283455281,40.797753640168,23.0840754118072,11.948367575497,24.3061087460468,45.0033736891824,52.6892288181647,63.5428223853075,0,1.70870880797853,1.23832120777933,0.370389054739423,0.188368457004691,0.820165366326151,0.457556346413045,1.01987057996313,1.95932033253121,0.967399816630967,40.0961659566348,5.06137589729817,16.062237903021,19.7649773703896,19.6542998253601,27.076957904526,22.1177528071106,24.2174625275234,46.8543136151413,103.691978633434,53.4351809254756,0,0.149516546043979,0.66183396182839,1.16670713006429,0.516639293910924,0.168956125490778,0.234714477291508,1.95306577265925,0.314578033277133,0,0.576060012515731,1.58005560314089,9.93353554921804,4.31386020092274,2.7283372825337,1.9692936523423,2.98022032171897,2.88469078847925,1.62458479892035,1.21159739937777,1.600342939755,1.20991422164209,2.53390489923356,1.44317762460494,1.05189211963412,25.8472637321341,26.4163284515137,10.2273796534802,27.1973078509807,8.30715254338419,70.1932458187421,63.0041587479392,42.0162022994969,42.1320567389705,0,0,0,0,0,0,0,0,0.453142408984205,0,0.415149390336707,1.99512436700516,1.53660245178721,3.16038732188782,1.25767897576789,1.10306105070008,3.77819437262746,4.53277125925567,3.53011130550997,3.03236654116557,3.04175159868288,4.14977951049368,4.12022632867483,4.67383612555546,4.70970845436029,2.85776214769844,5.56244764535306,5.59436739344745,6.59337441285291,3.23837624295674,2.40008476669791,3.01708870470874,6.67621331852499,2.90692833264657,3.01150017329058,5.07687647350059,5.3049112133104,4.73525480588117,4.6173398707593,4.48913817326191,5.69448086996036,4.92522411877817,3.27384834535751,5.2678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| |phase1_expression=4.16387002472464,234.86044934129,222.949627300873,123.707862424493,175.313505481222,58.5898658972495,51.3947809310156,0.129123323441576,0,0,0,0,0.171200729931206,0,1.33243904726265,1.21485160433896,0,4.73193248037357,3.56497527374921,2.97072756258621,12.246233781754,1.58865521921416,0.261199789138935,66.3968554592638,87.634345367659,164.230341736896,122.336406909177,109.459386204432,84.37039823863,75.3570087982193,80.9316363891862,0,0,0,31.1959749331377,30.9196440366796,37.7713309085383,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,1.43752564364972,2.51673909086605,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,11.0148505706638,0.860423876981386,0,0,0,0,9.55022056895913,0,0,0,9.29566570526091,0,0,0,33.9890934387606,45.8581356509928,36.9032844860792,26.9473956136982,2.33044095282455,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,46.967043869531,0.289198713839823,0,0.161766849947409,0,0,76.4206220994301,0.292780797011547,0,85.8335705500867,0.479260498023681,0,0.635351135365324,0,0,0,0,0,0,0,4.9901288286655,10.4501855312478,34.6230179054134,16.2040229032585,1.82168620147785,0.689706313300419,0.360124259610698,2.10986744970001,1.49680298132921,1.15302348256365,2.06143794031403,3.62184719034622,3.44908788692548,0.945530400839096,1.05570674498369,1.7535658594206,4.17070873838397,3.83077383174383,6.1734640922383,1.99034266818493,0.702213187313235,1.28673953557358,0.568326998791185,0.207125772535502,0.703578179943289,0,0.946978942340841,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,191.312475347619,119.002754998595,4.26576501070468,6.96710015581316,22.5518057313663,25.2104405779178,29.131523743678,35.7624177091611,72.6029464163103,51.0566759644434,33.6789179792361,39.592337936189,37.4331047268711,74.6020109183004,73.486936957396,81.4487807610362,5.69003702859245,5.36968009265725,4.50830942692322,8.14605311381257,8.53390943537553,10.3801013437671,17.2635746349222,24.2080642686548,22.2938193534752,25.5432129318127,1.1858105083486,0.333690211432188,0,0.224862112384854,0,0,1.52775511068852,0.863088412352432,0.324270453550071,1.09824565275233,0,2.23284568601102,0.624075346229121,0.505157755894224,0.538192240565737,0,10.1614254591633,4.16881105895066,7.00749398700711,7.63852885988347,11.2651319178481,11.8929442783689,15.2347930167049,21.8549685600735,9.14283835815908,4.20782910332672,9.08892181347676,9.66793556822854,11.2245238212832,13.1630643309176,0,0,97.3693260577692,68.7082498298784,0.160550589987792,0,0,0,0.315508219416257,0,0,0.477937595905104,0.668396022247182,0.283076530788832,0,1.46127928955656,0.790575555893047,0,5.39372323791421,3.73937767701236,4.39794790254655,21.6110861094021,14.6019652173959,23.3069410708782,25.0928552280743,16.597247018519,16.2416041084425,14.1420168054207,28.6855405416725,14.5413491791002,13.9033977570041,12.009396801561,13.7044191147498,15.470331487228,9.19186935535228,5.04171063287669,7.1147276080515,6.00143698088458,5.32020700926821,5.70780216326626,4.44282355625727,5.48036908406279,3.75474732901937,8.47328283455281,40.797753640168,23.0840754118072,11.948367575497,24.3061087460468,45.0033736891824,52.6892288181647,63.5428223853075,0,1.70870880797853,1.23832120777933,0.370389054739423,0.188368457004691,0.820165366326151,0.457556346413045,1.01987057996313,1.95932033253121,0.967399816630967,40.0961659566348,5.06137589729817,16.062237903021,19.7649773703896,19.6542998253601,27.076957904526,22.1177528071106,24.2174625275234,46.8543136151413,103.691978633434,53.4351809254756,0,0.149516546043979,0.66183396182839,1.16670713006429,0.516639293910924,0.168956125490778,0.234714477291508,1.95306577265925,0.314578033277133,0,0.576060012515731,1.58005560314089,9.93353554921804,4.31386020092274,2.7283372825337,1.9692936523423,2.98022032171897,2.88469078847925,1.62458479892035,1.21159739937777,1.600342939755,1.20991422164209,2.53390489923356,1.44317762460494,1.05189211963412,25.8472637321341,26.4163284515137,10.2273796534802,27.1973078509807,8.30715254338419,70.1932458187421,63.0041587479392,42.0162022994969,42.1320567389705,0,0,0,0,0,0,0,0,0.453142408984205,0,0.415149390336707,1.99512436700516,1.53660245178721,3.16038732188782,1.25767897576789,1.10306105070008,3.77819437262746,4.53277125925567,3.53011130550997,3.03236654116557,3.04175159868288,4.14977951049368,4.12022632867483,4.67383612555546,4.70970845436029,2.85776214769844,5.56244764535306,5.59436739344745,6.59337441285291,3.23837624295674,2.40008476669791,3.01708870470874,6.67621331852499,2.90692833264657,3.01150017329058,5.07687647350059,5.3049112133104,4.73525480588117,4.6173398707593,4.48913817326191,5.69448086996036,4.92522411877817,3.27384834535751,5.2678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| ||
|short_description=p1@St14 | |short_description=p1@St14 | ||
}} | }} |
Revision as of 20:24, 13 November 2012
Short description: | p1@St14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St14_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000123557, ENSMUST00000148789, NM_011176, uc009ori.1_5end |
EntrezGene: | St14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.83e-07 | 9 |
epithelial cell of alimentary canal | 5.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.13e-18 | 31 |
gastrointestinal system | 4.86e-18 | 47 |
endoderm-derived structure | 2.39e-11 | 118 |
endoderm | 2.39e-11 | 118 |
presumptive endoderm | 2.39e-11 | 118 |
digestive system | 4.69e-11 | 116 |
digestive tract | 4.69e-11 | 116 |
primitive gut | 4.69e-11 | 116 |
mucosa | 5.46e-11 | 15 |
subdivision of digestive tract | 4.08e-10 | 114 |
intestinal mucosa | 1.09e-09 | 13 |
wall of intestine | 1.09e-09 | 13 |
gastrointestinal system mucosa | 1.09e-09 | 13 |
organ component layer | 5.10e-07 | 24 |
epithelium of mucosa | 5.83e-07 | 9 |
gastrointestinal system epithelium | 5.83e-07 | 9 |
intestinal epithelium | 5.83e-07 | 9 |
simple columnar epithelium | 7.73e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.