FFCP PHASE1:Mm9::chr11:21472196..21472214,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:21472196..21472214,- | |id=chr11:21472196..21472214,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.11e-11,3;CL:0000239,1.22e-09,6;CL:0000677,1.22e-09,6;CL:0000584,1.22e-09,6;CL:0000075,2.91e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.48e-10!15;UBERON:0001242!1.22e-08!13;UBERON:0000060!1.22e-08!13;UBERON:0001262!1.22e-08!13;UBERON:0004786!1.22e-08!13;UBERON:0000160!4.41e-08!43;UBERON:0005409!2.20e-07!59;UBERON:0004923!8.29e-07!24 | |ontology_enrichment_uberon=UBERON:0000344!6.48e-10!15;UBERON:0001242!1.22e-08!13;UBERON:0000060!1.22e-08!13;UBERON:0001262!1.22e-08!13;UBERON:0004786!1.22e-08!13;UBERON:0000160!4.41e-08!43;UBERON:0005409!2.20e-07!59;UBERON:0004923!8.29e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.83e-21,31;UBERON:0000344,7.90e-17,15;UBERON:0001242,1.24e-15,13;UBERON:0001262,1.24e-15,13;UBERON:0004786,1.24e-15,13;UBERON:0005409,5.56e-13,47;UBERON:0000331,5.21e-10,3;UBERON:0002116,5.21e-10,3;UBERON:0001204,5.21e-10,3;UBERON:0001168,5.21e-10,3;UBERON:0004923,6.18e-10,24;UBERON:0002108,1.29e-07,4 | |||
|phase1_expression=0.160148847104794,9.77131141390211,4.09499315450582,5.14189159221611,6.01074875935617,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0.342401459862411,0.262261207256992,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0,0.765389611359628,0.0992909512008853,0,1.75991665072747,0.68822784320151,7.46501553349526,3.01533397311352,2.37018355954478,3.6104449696711,1.51218077855958,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,1.57057123192139,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.61119299110724,0,0,0.186399445825301,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,1.48439043634778,0.258937883647172,0,0,0.913396434936424,0.461230994512117,1.20578112442098,0.23517741427141,0.376999773989026,0,0,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,0,2.04365644166873,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0,0,0.324482526135515,0,0.497627882440372,0.252722758433675,1.05220927943237,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0,0,0,0.462801338662135,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,13.2167513193519,2.90895623329899,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,1.25667604400135,0.795825888164603,0.779856348476481,1.79763881730844,5.18731319699266,5.57595565112228,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.713475270408282,0,0,0,0,0,0.32977250588296,0.161464426695906,0,0.238744688006273,0,0.582961673259701,0,0,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0.509935289981566,0.139951452323658,0,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0,0.583353565032143,0.129159823477731,0.168956125490778,0,0,0.419437377702843,2.17425708743405,1.44015003128933,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0.240390899039938,0.443068581523732,0,0.15241361331,0.403304740547362,0.194915761479505,0,0.116876902181569,0,0,0.179427713218951,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,9.77131141390211,4.09499315450582,5.14189159221611,6.01074875935617,0.33575854382378,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0.342401459862411,0.262261207256992,0.333109761815663,0,0,0.473193248037357,0.137114433605739,0,0.765389611359628,0.0992909512008853,0,1.75991665072747,0.68822784320151,7.46501553349526,3.01533397311352,2.37018355954478,3.6104449696711,1.51218077855958,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,1.57057123192139,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.61119299110724,0,0,0.186399445825301,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0.505524445014783,1.48439043634778,0.258937883647172,0,0,0.913396434936424,0.461230994512117,1.20578112442098,0.23517741427141,0.376999773989026,0,0,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,0,2.04365644166873,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0,0,0.324482526135515,0,0.497627882440372,0.252722758433675,1.05220927943237,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0.702213187313235,0.257347907114715,0.852490498186778,0,0,0,0,0,0.462801338662135,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0,13.2167513193519,2.90895623329899,0,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,1.42358718463353,0.329397909448022,1.25667604400135,0.795825888164603,0.779856348476481,1.79763881730844,5.18731319699266,5.57595565112228,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.482354319504834,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.713475270408282,0,0,0,0,0,0.32977250588296,0.161464426695906,0,0.238744688006273,0,0.582961673259701,0,0,0.206386867963223,0.370389054739423,0.565105371014073,0.136694227721025,0,0.509935289981566,0.139951452323658,0,0,0,0,0,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0,0.583353565032143,0.129159823477731,0.168956125490778,0,0,0.419437377702843,2.17425708743405,1.44015003128933,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0.240390899039938,0.443068581523732,0,0.15241361331,0.403304740547362,0.194915761479505,0,0.116876902181569,0,0,0.179427713218951,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p5@Mdh1 | |short_description=p5@Mdh1 | ||
}} | }} |
Revision as of 20:10, 13 November 2012
Short description: | p5@Mdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000102874_5end |
EntrezGene: | Mdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.11e-11 | 3 |
brush border epithelial cell | 1.22e-09 | 6 |
gut absorptive cell | 1.22e-09 | 6 |
enterocyte | 1.22e-09 | 6 |
columnar/cuboidal epithelial cell | 2.91e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.83e-21 | 31 |
mucosa | 7.90e-17 | 15 |
intestinal mucosa | 1.24e-15 | 13 |
wall of intestine | 1.24e-15 | 13 |
gastrointestinal system mucosa | 1.24e-15 | 13 |
gastrointestinal system | 5.56e-13 | 47 |
ileal mucosa | 5.21e-10 | 3 |
ileum | 5.21e-10 | 3 |
mucosa of small intestine | 5.21e-10 | 3 |
wall of small intestine | 5.21e-10 | 3 |
organ component layer | 6.18e-10 | 24 |
small intestine | 1.29e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.