FFCP PHASE1:Mm9::chr3:66777702..66777749,-: Difference between revisions
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|id=chr3:66777702..66777749,- | |id=chr3:66777702..66777749,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.32e-14,3;CL:0000117,2.02e-14,23;CL:0000337,2.02e-14,23;CL:0000120,5.42e-14,3;CL:0002610,1.95e-13,3;CL:0000540,1.22e-09,33;CL:0000047,1.22e-09,33;CL:0000031,1.22e-09,33;CL:0000404,1.22e-09,33;CL:0000393,6.03e-08,39;CL:0000211,6.03e-08,39;CL:0002319,4.44e-07,43;CL:0000221,6.90e-07,44;CL:0000133,6.90e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!1.09e-08!10;UBERON:0006222!1.09e-08!10;UBERON:0000007!5.86e-07!8;UBERON:0003296!5.86e-07!8;UBERON:0010133!5.86e-07!8 | |ontology_enrichment_uberon=UBERON:0001894!1.09e-08!10;UBERON:0006222!1.09e-08!10;UBERON:0000007!5.86e-07!8;UBERON:0003296!5.86e-07!8;UBERON:0010133!5.86e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001894,1.13e-19,10;UBERON:0006222,1.13e-19,10;UBERON:0001017,1.84e-14,73;UBERON:0001016,5.33e-14,75;UBERON:0004684,1.95e-13,3;UBERON:0002275,1.95e-13,3;UBERON:0000073,2.45e-13,54;UBERON:0000007,1.34e-12,8;UBERON:0003296,1.34e-12,8;UBERON:0010133,1.34e-12,8;UBERON:0003080,2.46e-11,40;UBERON:0004121,1.90e-10,95;UBERON:0000924,1.90e-10,95;UBERON:0006601,1.90e-10,95;UBERON:0002616,1.27e-09,46;UBERON:0002780,1.65e-09,39;UBERON:0001890,1.65e-09,39;UBERON:0006240,1.65e-09,39;UBERON:0000955,2.23e-09,47;UBERON:0006238,2.23e-09,47;UBERON:0000369,6.03e-09,5;UBERON:0002435,6.03e-09,5;UBERON:0000204,6.03e-09,5;UBERON:0010082,6.03e-09,5;UBERON:0003056,6.38e-09,49;UBERON:0001049,2.65e-08,52;UBERON:0005068,2.65e-08,52;UBERON:0006241,2.65e-08,52;UBERON:0007135,2.65e-08,52 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,3.70293685490423,3.1691570175309,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,2.20231761998777,2.42605942361857,2.30409799884365,8.44072241473241,12.1678565991205,8.33461392890816,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0.745597783301202,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0,0,1.94120219936891,0,0.969750506270444,0,0,0,0,0,0,0,5.84183493678809,0,0.125654352112864,0,0,3.53239675751252,2.43361894601636,0,0.248813941220186,0.505445516867349,0,0.130120442962704,0.689706313300419,0.720248519221397,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.258703370739016,1.29340795759705,0.945530400839096,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.937693492737625,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0,0,0,0,1.70219802876894,0.720244376125241,0.258717367565509,0.643011105094777,1.41872186913819,1.07021290561242,1.31639216481697,1.8267896946876,0,0.63549621259146,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,1.02440163452481,0.243106717068294,0.419226325255965,0.367687016900028,0,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.34461281373368,0.476293691283074,0.927074607558844,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,1.05227884575137,0.271608227691724,0.561142271657738,0.830445126869219,0,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23706337375356,3.70293685490423,3.1691570175309,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,2.20231761998777,2.42605942361857,2.30409799884365,8.44072241473241,12.1678565991205,8.33461392890816,0.558365998002762,0,0.45839474333043,0,0.142371680799103,0.745597783301202,0.151452386666368,0,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.519572009205738,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0,0,1.94120219936891,0,0.969750506270444,0,0,0,0,0,0,0,5.84183493678809,0,0.125654352112864,0,0,3.53239675751252,2.43361894601636,0,0.248813941220186,0.505445516867349,0,0.130120442962704,0.689706313300419,0.720248519221397,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.258703370739016,1.29340795759705,0.945530400839096,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0.414251545071004,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.481651769963376,0.937693492737625,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0,0,0,0,1.70219802876894,0.720244376125241,0.258717367565509,0.643011105094777,1.41872186913819,1.07021290561242,1.31639216481697,1.8267896946876,0,0.63549621259146,0,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,1.02440163452481,0.243106717068294,0.419226325255965,0.367687016900028,0,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.34461281373368,0.476293691283074,0.927074607558844,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,1.05227884575137,0.271608227691724,0.561142271657738,0.830445126869219,0,0.409231043169689,0.464810523557898,0.771626443924566,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0,0.463735671240843 | ||
|short_description=p@chr3:66777702..66777749,- | |short_description=p@chr3:66777702..66777749,- | ||
}} | }} |
Revision as of 06:12, 15 November 2012
Short description: | p@chr3:66777702..66777749, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:66777702..66777749, - |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.32e-14 | 3 |
CNS neuron (sensu Vertebrata) | 2.02e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-14 | 23 |
granule cell | 5.42e-14 | 3 |
raphe nuclei neuron | 1.95e-13 | 3 |
neuron | 1.22e-09 | 33 |
neuronal stem cell | 1.22e-09 | 33 |
neuroblast | 1.22e-09 | 33 |
electrically signaling cell | 1.22e-09 | 33 |
electrically responsive cell | 6.03e-08 | 39 |
electrically active cell | 6.03e-08 | 39 |
neural cell | 4.44e-07 | 43 |
ectodermal cell | 6.90e-07 | 44 |
neurectodermal cell | 6.90e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
diencephalon | 1.13e-19 | 10 |
future diencephalon | 1.13e-19 | 10 |
central nervous system | 1.84e-14 | 73 |
nervous system | 5.33e-14 | 75 |
raphe nuclei | 1.95e-13 | 3 |
reticular formation | 1.95e-13 | 3 |
regional part of nervous system | 2.45e-13 | 54 |
pituitary gland | 1.34e-12 | 8 |
gland of diencephalon | 1.34e-12 | 8 |
neuroendocrine gland | 1.34e-12 | 8 |
anterior neural tube | 2.46e-11 | 40 |
ectoderm-derived structure | 1.90e-10 | 95 |
ectoderm | 1.90e-10 | 95 |
presumptive ectoderm | 1.90e-10 | 95 |
regional part of brain | 1.27e-09 | 46 |
regional part of forebrain | 1.65e-09 | 39 |
forebrain | 1.65e-09 | 39 |
future forebrain | 1.65e-09 | 39 |
brain | 2.23e-09 | 47 |
future brain | 2.23e-09 | 47 |
corpus striatum | 6.03e-09 | 5 |
striatum | 6.03e-09 | 5 |
ventral part of telencephalon | 6.03e-09 | 5 |
future corpus striatum | 6.03e-09 | 5 |
pre-chordal neural plate | 6.38e-09 | 49 |
neural tube | 2.65e-08 | 52 |
neural rod | 2.65e-08 | 52 |
future spinal cord | 2.65e-08 | 52 |
neural keel | 2.65e-08 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.