FFCP PHASE1:Mm9::chrX:39419726..39419738,+: Difference between revisions
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|id=chrX:39419726..39419738,+ | |id=chrX:39419726..39419738,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.47e-08,25;CL:0000182,1.76e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!4.79e-15!23;UBERON:0009856!4.79e-15!23;UBERON:0002107!3.65e-14!22;UBERON:0007499!3.65e-14!22;UBERON:0006925!3.65e-14!22;UBERON:0009497!3.65e-14!22;UBERON:0000015!3.65e-14!22;UBERON:0002423!3.65e-14!22;UBERON:0006235!3.65e-14!22;UBERON:0008835!3.65e-14!22;UBERON:0003894!3.65e-14!22;UBERON:0004161!3.65e-14!22;UBERON:0008836!3.65e-14!22;UBERON:0002365!1.27e-11!25;UBERON:0002330!1.27e-11!25;UBERON:0000160!6.00e-09!43;UBERON:0004119!3.50e-08!130;UBERON:0000925!3.50e-08!130;UBERON:0006595!3.50e-08!130;UBERON:0000344!5.87e-08!15;UBERON:0001007!1.27e-07!128;UBERON:0001555!1.27e-07!128;UBERON:0007026!1.27e-07!128;UBERON:0004921!8.66e-07!126;UBERON:0004185!8.66e-07!126;UBERON:0005409!9.11e-07!59 | |ontology_enrichment_uberon=UBERON:0009854!4.79e-15!23;UBERON:0009856!4.79e-15!23;UBERON:0002107!3.65e-14!22;UBERON:0007499!3.65e-14!22;UBERON:0006925!3.65e-14!22;UBERON:0009497!3.65e-14!22;UBERON:0000015!3.65e-14!22;UBERON:0002423!3.65e-14!22;UBERON:0006235!3.65e-14!22;UBERON:0008835!3.65e-14!22;UBERON:0003894!3.65e-14!22;UBERON:0004161!3.65e-14!22;UBERON:0008836!3.65e-14!22;UBERON:0002365!1.27e-11!25;UBERON:0002330!1.27e-11!25;UBERON:0000160!6.00e-09!43;UBERON:0004119!3.50e-08!130;UBERON:0000925!3.50e-08!130;UBERON:0006595!3.50e-08!130;UBERON:0000344!5.87e-08!15;UBERON:0001007!1.27e-07!128;UBERON:0001555!1.27e-07!128;UBERON:0007026!1.27e-07!128;UBERON:0004921!8.66e-07!126;UBERON:0004185!8.66e-07!126;UBERON:0005409!9.11e-07!59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.35e-19,31;UBERON:0009854,5.80e-15,23;UBERON:0009856,5.80e-15,23;UBERON:0001007,8.79e-14,116;UBERON:0001555,8.79e-14,116;UBERON:0007026,8.79e-14,116;UBERON:0002107,1.61e-13,22;UBERON:0007499,1.61e-13,22;UBERON:0006925,1.61e-13,22;UBERON:0009497,1.61e-13,22;UBERON:0000015,1.61e-13,22;UBERON:0002423,1.61e-13,22;UBERON:0006235,1.61e-13,22;UBERON:0008835,1.61e-13,22;UBERON:0003894,1.61e-13,22;UBERON:0004161,1.61e-13,22;UBERON:0008836,1.61e-13,22;UBERON:0004119,2.09e-13,118;UBERON:0000925,2.09e-13,118;UBERON:0006595,2.09e-13,118;UBERON:0005409,2.04e-12,47;UBERON:0004921,4.12e-12,114;UBERON:0000344,1.19e-11,15;UBERON:0002365,1.62e-11,25;UBERON:0002330,1.62e-11,25;UBERON:0001242,5.46e-09,13;UBERON:0001262,5.46e-09,13;UBERON:0004786,5.46e-09,13;UBERON:0004923,6.99e-08,24;UBERON:0002108,9.91e-08,4;UBERON:0003929,3.55e-07,55 | |||
|phase1_expression=0,3.83872948403297,3.63999391511629,11.7961042409664,11.520601788766,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,1.60586496747019,5.7423196411502,2.15380998079537,2.15471232685889,2.09025761402011,1.76421090831952,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,4.75979933595425,7.55584468292944,7.79731700937203,12.9927797258227,1.68533304158102,0,0,0,0,0,0,0,0.432982082022428,0,0,2.62622923353838,0,0,0,0,0,0,0.117588707135705,0,1.73036477414062,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,15.993581047372,0,0,0,0,0,0.2562274405697,0.0937017245597288,18.8853460639481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,8.19796756656987,0,0,0.128867461322093,0.201683524623343,1.11189021922435,1.71203063501303,5.21981967698963,1.64698954724011,0.251335208800269,0,0.19496408711912,5.39291645192533,3.24207074812041,5.57595565112228,0,0,0,0,0,0,0,0,0,0,6.81841042300442,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,1.52775511068852,6.04161888646702,0.972811360650212,3.29473695825698,5.75072826109418,0.744281895337007,0.312037673114561,1.01031551178845,8.43167843552987,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,1.6488625294148,0,0.0603129249281559,0.238744688006273,0.492422699235184,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0.330613822901344,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.358855426437903,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,1.01391719956096,0.188626341386076,0.280924522409647,0.384150914429216,0.574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,1.01537529470012,0.73171189149109,0.789209134313529,0.543216455383447,0,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,3.83872948403297,3.63999391511629,11.7961042409664,11.520601788766,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,1.60586496747019,5.7423196411502,2.15380998079537,2.15471232685889,2.09025761402011,1.76421090831952,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,4.75979933595425,7.55584468292944,7.79731700937203,12.9927797258227,1.68533304158102,0,0,0,0,0,0,0,0.432982082022428,0,0,2.62622923353838,0,0,0,0,0,0,0.117588707135705,0,1.73036477414062,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,15.993581047372,0,0,0,0,0,0.2562274405697,0.0937017245597288,18.8853460639481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,8.19796756656987,0,0,0.128867461322093,0.201683524623343,1.11189021922435,1.71203063501303,5.21981967698963,1.64698954724011,0.251335208800269,0,0.19496408711912,5.39291645192533,3.24207074812041,5.57595565112228,0,0,0,0,0,0,0,0,0,0,6.81841042300442,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,1.52775511068852,6.04161888646702,0.972811360650212,3.29473695825698,5.75072826109418,0.744281895337007,0.312037673114561,1.01031551178845,8.43167843552987,7.23665282045051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,1.6488625294148,0,0.0603129249281559,0.238744688006273,0.492422699235184,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0,0.330613822901344,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0.665957860122194,0.358855426437903,0.839423081820392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,1.01391719956096,0.188626341386076,0.280924522409647,0.384150914429216,0.574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.883193520806384,0,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,1.01537529470012,0.73171189149109,0.789209134313529,0.543216455383447,0,0.711810108745045,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p@chrX:39419726..39419738,+ | |short_description=p@chrX:39419726..39419738,+ | ||
}} | }} |
Revision as of 19:27, 14 November 2012
Short description: | p@chrX:39419726..39419738, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:39419726..39419738, + |
Coexpression cluster: | MCL_coexpression_mm9:1996 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.47e-08 | 25 |
hepatocyte | 1.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.35e-19 | 31 |
digestive tract diverticulum | 5.80e-15 | 23 |
sac | 5.80e-15 | 23 |
digestive system | 8.79e-14 | 116 |
digestive tract | 8.79e-14 | 116 |
primitive gut | 8.79e-14 | 116 |
liver | 1.61e-13 | 22 |
epithelial sac | 1.61e-13 | 22 |
digestive gland | 1.61e-13 | 22 |
epithelium of foregut-midgut junction | 1.61e-13 | 22 |
anatomical boundary | 1.61e-13 | 22 |
hepatobiliary system | 1.61e-13 | 22 |
foregut-midgut junction | 1.61e-13 | 22 |
hepatic diverticulum | 1.61e-13 | 22 |
liver primordium | 1.61e-13 | 22 |
septum transversum | 1.61e-13 | 22 |
liver bud | 1.61e-13 | 22 |
endoderm-derived structure | 2.09e-13 | 118 |
endoderm | 2.09e-13 | 118 |
presumptive endoderm | 2.09e-13 | 118 |
gastrointestinal system | 2.04e-12 | 47 |
subdivision of digestive tract | 4.12e-12 | 114 |
mucosa | 1.19e-11 | 15 |
exocrine gland | 1.62e-11 | 25 |
exocrine system | 1.62e-11 | 25 |
intestinal mucosa | 5.46e-09 | 13 |
wall of intestine | 5.46e-09 | 13 |
gastrointestinal system mucosa | 5.46e-09 | 13 |
organ component layer | 6.99e-08 | 24 |
small intestine | 9.91e-08 | 4 |
gut epithelium | 3.55e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.