FFCP PHASE1:Mm9::chr19:11043250..11043262,-: Difference between revisions
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|id=chr19:11043250..11043262,- | |id=chr19:11043250..11043262,- | ||
|ontology_enrichment_celltype=CL:0002563!1.76e-16!9;CL:0002251!1.76e-16!9;CL:0000239!2.13e-12!6;CL:0000677!2.13e-12!6;CL:0000212!2.13e-12!6;CL:0000584!2.13e-12!6;CL:0000075!1.75e-10!7;CL:0000066!4.15e-09!25;CL:0002076!4.31e-09!15;CL:0000473!2.22e-07!3;CL:0000627!2.22e-07!3;CL:0000682!2.22e-07!3 | |ontology_enrichment_celltype=CL:0002563!1.76e-16!9;CL:0002251!1.76e-16!9;CL:0000239!2.13e-12!6;CL:0000677!2.13e-12!6;CL:0000212!2.13e-12!6;CL:0000584!2.13e-12!6;CL:0000075!1.75e-10!7;CL:0000066!4.15e-09!25;CL:0002076!4.31e-09!15;CL:0000473!2.22e-07!3;CL:0000627!2.22e-07!3;CL:0000682!2.22e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.64e-24,6;CL:0000677,1.64e-24,6;CL:0000584,1.64e-24,6;CL:0000075,5.99e-21,7;CL:0002563,3.42e-16,9;CL:0002251,3.42e-16,9;CL:0000682,6.93e-14,3;CL:0000066,2.05e-12,25;CL:0002076,1.63e-09,15;CL:0000223,5.34e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.60e-28!43;UBERON:0000344!3.34e-27!15;UBERON:0001242!3.03e-23!13;UBERON:0000060!3.03e-23!13;UBERON:0001262!3.03e-23!13;UBERON:0004786!3.03e-23!13;UBERON:0005409!1.84e-21!59;UBERON:0003350!1.76e-16!9;UBERON:0004808!1.76e-16!9;UBERON:0001277!1.76e-16!9;UBERON:0004923!1.91e-15!24;UBERON:0000485!4.07e-13!11;UBERON:0002369!3.49e-11!7;UBERON:0006858!3.49e-11!7;UBERON:0002342!1.65e-07!10;UBERON:0005062!1.65e-07!10;UBERON:0001007!2.32e-07!128;UBERON:0001555!2.32e-07!128;UBERON:0007026!2.32e-07!128;UBERON:0004119!3.95e-07!130;UBERON:0000925!3.95e-07!130;UBERON:0006595!3.95e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!3.60e-28!43;UBERON:0000344!3.34e-27!15;UBERON:0001242!3.03e-23!13;UBERON:0000060!3.03e-23!13;UBERON:0001262!3.03e-23!13;UBERON:0004786!3.03e-23!13;UBERON:0005409!1.84e-21!59;UBERON:0003350!1.76e-16!9;UBERON:0004808!1.76e-16!9;UBERON:0001277!1.76e-16!9;UBERON:0004923!1.91e-15!24;UBERON:0000485!4.07e-13!11;UBERON:0002369!3.49e-11!7;UBERON:0006858!3.49e-11!7;UBERON:0002342!1.65e-07!10;UBERON:0005062!1.65e-07!10;UBERON:0001007!2.32e-07!128;UBERON:0001555!2.32e-07!128;UBERON:0007026!2.32e-07!128;UBERON:0004119!3.95e-07!130;UBERON:0000925!3.95e-07!130;UBERON:0006595!3.95e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.53e-34,31;UBERON:0000344,9.25e-32,15;UBERON:0001242,2.94e-24,13;UBERON:0001262,2.94e-24,13;UBERON:0004786,2.94e-24,13;UBERON:0005409,1.09e-21,47;UBERON:0004923,3.52e-19,24;UBERON:0003350,3.42e-16,9;UBERON:0004808,3.42e-16,9;UBERON:0001277,3.42e-16,9;UBERON:0000485,3.68e-13,11;UBERON:0001962,7.70e-10,2;UBERON:0001961,7.70e-10,2;UBERON:0001744,7.70e-10,2;UBERON:0001007,1.86e-09,116;UBERON:0001555,1.86e-09,116;UBERON:0007026,1.86e-09,116;UBERON:0004119,3.06e-09,118;UBERON:0000925,3.06e-09,118;UBERON:0006595,3.06e-09,118;UBERON:0004921,3.25e-07,114;UBERON:0002465,8.07e-07,3 | |||
|phase1_expression=0,4.53668029931169,2.72999543633722,2.41971369045464,2.00358291978539,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,5.27641346454491,9.76194338995534,3.4460959692726,5.817723282519,0.570070258369122,1.51218077855958,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.64450566663544,0,0,0.257734922644187,0.201683524623343,1.33426826306922,0.190225626112559,1.42358718463353,1.15289268306808,0.251335208800269,1.1937388322469,0.19496408711912,0.898819408654221,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,4.53668029931169,2.72999543633722,2.41971369045464,2.00358291978539,1.34303417529512,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,5.27641346454491,9.76194338995534,3.4460959692726,5.817723282519,0.570070258369122,1.51218077855958,1.77384408524244,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.64450566663544,0,0,0.257734922644187,0.201683524623343,1.33426826306922,0.190225626112559,1.42358718463353,1.15289268306808,0.251335208800269,1.1937388322469,0.19496408711912,0.898819408654221,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:11043250..11043262,- | |short_description=p@chr19:11043250..11043262,- | ||
}} | }} |
Revision as of 07:24, 14 November 2012
Short description: | p@chr19:11043250..11043262, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:11043250..11043262, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.64e-24 | 6 |
gut absorptive cell | 1.64e-24 | 6 |
enterocyte | 1.64e-24 | 6 |
columnar/cuboidal epithelial cell | 5.99e-21 | 7 |
intestinal epithelial cell | 3.42e-16 | 9 |
epithelial cell of alimentary canal | 3.42e-16 | 9 |
M cell of gut | 6.93e-14 | 3 |
epithelial cell | 2.05e-12 | 25 |
endo-epithelial cell | 1.63e-09 | 15 |
endodermal cell | 5.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.53e-34 | 31 |
mucosa | 9.25e-32 | 15 |
intestinal mucosa | 2.94e-24 | 13 |
wall of intestine | 2.94e-24 | 13 |
gastrointestinal system mucosa | 2.94e-24 | 13 |
gastrointestinal system | 1.09e-21 | 47 |
organ component layer | 3.52e-19 | 24 |
epithelium of mucosa | 3.42e-16 | 9 |
gastrointestinal system epithelium | 3.42e-16 | 9 |
intestinal epithelium | 3.42e-16 | 9 |
simple columnar epithelium | 3.68e-13 | 11 |
gut-associated lymphoid tissue | 7.70e-10 | 2 |
mucosa-associated lymphoid tissue | 7.70e-10 | 2 |
lymphoid tissue | 7.70e-10 | 2 |
digestive system | 1.86e-09 | 116 |
digestive tract | 1.86e-09 | 116 |
primitive gut | 1.86e-09 | 116 |
endoderm-derived structure | 3.06e-09 | 118 |
endoderm | 3.06e-09 | 118 |
presumptive endoderm | 3.06e-09 | 118 |
subdivision of digestive tract | 3.25e-07 | 114 |
lymphoid system | 8.07e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.