FFCP PHASE1:Mm9::chr11:66768590..66768604,+: Difference between revisions
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|id=chr11:66768590..66768604,+ | |id=chr11:66768590..66768604,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.13e-19!6;CL:0000677!2.13e-19!6;CL:0000212!2.13e-19!6;CL:0000584!2.13e-19!6;CL:0000075!1.51e-16!7;CL:0002563!9.69e-13!9;CL:0002251!9.69e-13!9;CL:0000473!3.07e-11!3;CL:0000627!3.07e-11!3;CL:0000682!3.07e-11!3;CL:0000066!1.78e-09!25;CL:0002076!2.13e-07!15 | |ontology_enrichment_celltype=CL:0000239!2.13e-19!6;CL:0000677!2.13e-19!6;CL:0000212!2.13e-19!6;CL:0000584!2.13e-19!6;CL:0000075!1.51e-16!7;CL:0002563!9.69e-13!9;CL:0002251!9.69e-13!9;CL:0000473!3.07e-11!3;CL:0000627!3.07e-11!3;CL:0000682!3.07e-11!3;CL:0000066!1.78e-09!25;CL:0002076!2.13e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.51e-17,3;CL:0000239,2.42e-14,6;CL:0000677,2.42e-14,6;CL:0000584,2.42e-14,6;CL:0000075,2.51e-12,7;CL:0000066,7.95e-10,25;CL:0002563,1.25e-09,9;CL:0002251,1.25e-09,9;CL:0000473,1.54e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.95e-30!15;UBERON:0004923!2.91e-24!24;UBERON:0001242!5.24e-24!13;UBERON:0000060!5.24e-24!13;UBERON:0001262!5.24e-24!13;UBERON:0004786!5.24e-24!13;UBERON:0000160!1.84e-23!43;UBERON:0005409!4.62e-16!59;UBERON:0003350!9.69e-13!9;UBERON:0004808!9.69e-13!9;UBERON:0001277!9.69e-13!9;UBERON:0000331!6.59e-11!3;UBERON:0002116!6.59e-11!3;UBERON:0001204!6.59e-11!3;UBERON:0001168!6.59e-11!3;UBERON:0000485!2.59e-10!11;UBERON:0004119!8.18e-10!130;UBERON:0000925!8.18e-10!130;UBERON:0006595!8.18e-10!130;UBERON:0001007!5.09e-08!128;UBERON:0001555!5.09e-08!128;UBERON:0007026!5.09e-08!128;UBERON:0001962!5.42e-08!2;UBERON:0001961!5.42e-08!2;UBERON:0001744!5.42e-08!2;UBERON:0001987!8.28e-07!2;UBERON:0003124!8.28e-07!2;UBERON:0004340!8.28e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!3.95e-30!15;UBERON:0004923!2.91e-24!24;UBERON:0001242!5.24e-24!13;UBERON:0000060!5.24e-24!13;UBERON:0001262!5.24e-24!13;UBERON:0004786!5.24e-24!13;UBERON:0000160!1.84e-23!43;UBERON:0005409!4.62e-16!59;UBERON:0003350!9.69e-13!9;UBERON:0004808!9.69e-13!9;UBERON:0001277!9.69e-13!9;UBERON:0000331!6.59e-11!3;UBERON:0002116!6.59e-11!3;UBERON:0001204!6.59e-11!3;UBERON:0001168!6.59e-11!3;UBERON:0000485!2.59e-10!11;UBERON:0004119!8.18e-10!130;UBERON:0000925!8.18e-10!130;UBERON:0006595!8.18e-10!130;UBERON:0001007!5.09e-08!128;UBERON:0001555!5.09e-08!128;UBERON:0007026!5.09e-08!128;UBERON:0001962!5.42e-08!2;UBERON:0001961!5.42e-08!2;UBERON:0001744!5.42e-08!2;UBERON:0001987!8.28e-07!2;UBERON:0003124!8.28e-07!2;UBERON:0004340!8.28e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.30e-34,15;UBERON:0001242,6.88e-25,13;UBERON:0001262,6.88e-25,13;UBERON:0004786,6.88e-25,13;UBERON:0000160,2.43e-22,31;UBERON:0002108,6.58e-21,4;UBERON:0004923,1.22e-20,24;UBERON:0000331,2.19e-16,3;UBERON:0002116,2.19e-16,3;UBERON:0001204,2.19e-16,3;UBERON:0001168,2.19e-16,3;UBERON:0005409,3.50e-14,47;UBERON:0001962,9.10e-12,2;UBERON:0001961,9.10e-12,2;UBERON:0001744,9.10e-12,2;UBERON:0003350,1.25e-09,9;UBERON:0004808,1.25e-09,9;UBERON:0001277,1.25e-09,9;UBERON:0002465,3.94e-08,3;UBERON:0000485,6.59e-08,11;UBERON:0001007,7.86e-07,116;UBERON:0001555,7.86e-07,116;UBERON:0007026,7.86e-07,116 | |||
|phase1_expression=0,23.7303277194766,15.9249733786338,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7993938234725,10.5528269290898,17.2269589234506,10.3382879078178,11.4199753323521,1.90023419456374,1.76421090831952,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,23.7303277194766,15.9249733786338,0.30246421130683,0.500895729946347,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7993938234725,10.5528269290898,17.2269589234506,10.3382879078178,11.4199753323521,1.90023419456374,1.76421090831952,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:66768590..66768604,+ | |short_description=p@chr11:66768590..66768604,+ | ||
}} | }} |
Revision as of 00:31, 15 November 2012
Short description: | p@chr11:66768590..66768604, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:66768590..66768604, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.51e-17 | 3 |
brush border epithelial cell | 2.42e-14 | 6 |
gut absorptive cell | 2.42e-14 | 6 |
enterocyte | 2.42e-14 | 6 |
columnar/cuboidal epithelial cell | 2.51e-12 | 7 |
epithelial cell | 7.95e-10 | 25 |
intestinal epithelial cell | 1.25e-09 | 9 |
epithelial cell of alimentary canal | 1.25e-09 | 9 |
defensive cell | 1.54e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.30e-34 | 15 |
intestinal mucosa | 6.88e-25 | 13 |
wall of intestine | 6.88e-25 | 13 |
gastrointestinal system mucosa | 6.88e-25 | 13 |
intestine | 2.43e-22 | 31 |
small intestine | 6.58e-21 | 4 |
organ component layer | 1.22e-20 | 24 |
ileal mucosa | 2.19e-16 | 3 |
ileum | 2.19e-16 | 3 |
mucosa of small intestine | 2.19e-16 | 3 |
wall of small intestine | 2.19e-16 | 3 |
gastrointestinal system | 3.50e-14 | 47 |
gut-associated lymphoid tissue | 9.10e-12 | 2 |
mucosa-associated lymphoid tissue | 9.10e-12 | 2 |
lymphoid tissue | 9.10e-12 | 2 |
epithelium of mucosa | 1.25e-09 | 9 |
gastrointestinal system epithelium | 1.25e-09 | 9 |
intestinal epithelium | 1.25e-09 | 9 |
lymphoid system | 3.94e-08 | 3 |
simple columnar epithelium | 6.59e-08 | 11 |
digestive system | 7.86e-07 | 116 |
digestive tract | 7.86e-07 | 116 |
primitive gut | 7.86e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.