FFCP PHASE1:Mm9::chr11:24219966..24219970,+: Difference between revisions
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|id=chr11:24219966..24219970,+ | |id=chr11:24219966..24219970,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.99e-28!6;CL:0000677!7.99e-28!6;CL:0000212!7.99e-28!6;CL:0000584!7.99e-28!6;CL:0000075!8.36e-24!7;CL:0002563!1.95e-18!9;CL:0002251!1.95e-18!9;CL:0000473!7.07e-16!3;CL:0000627!7.07e-16!3;CL:0000682!7.07e-16!3;CL:0000066!1.94e-14!25;CL:0002076!6.77e-11!15;CL:0000223!4.68e-08!20 | |ontology_enrichment_celltype=CL:0000239!7.99e-28!6;CL:0000677!7.99e-28!6;CL:0000212!7.99e-28!6;CL:0000584!7.99e-28!6;CL:0000075!8.36e-24!7;CL:0002563!1.95e-18!9;CL:0002251!1.95e-18!9;CL:0000473!7.07e-16!3;CL:0000627!7.07e-16!3;CL:0000682!7.07e-16!3;CL:0000066!1.94e-14!25;CL:0002076!6.77e-11!15;CL:0000223!4.68e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.46e-25,3;CL:0000239,2.18e-21,6;CL:0000677,2.18e-21,6;CL:0000584,2.18e-21,6;CL:0000075,2.15e-18,7;CL:0000066,1.64e-15,25;CL:0002563,2.14e-14,9;CL:0002251,2.14e-14,9;CL:0000473,2.45e-11,7;CL:0002076,9.14e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.69e-36!15;UBERON:0001242!2.38e-28!13;UBERON:0000060!2.38e-28!13;UBERON:0001262!2.38e-28!13;UBERON:0004786!2.38e-28!13;UBERON:0004923!3.15e-22!24;UBERON:0000160!5.65e-19!43;UBERON:0003350!1.95e-18!9;UBERON:0004808!1.95e-18!9;UBERON:0001277!1.95e-18!9;UBERON:0000331!4.13e-15!3;UBERON:0002116!4.13e-15!3;UBERON:0001204!4.13e-15!3;UBERON:0001168!4.13e-15!3;UBERON:0000485!5.16e-15!11;UBERON:0005409!3.02e-13!59;UBERON:0001962!2.47e-10!2;UBERON:0001961!2.47e-10!2;UBERON:0001744!2.47e-10!2;UBERON:0002465!3.62e-07!3;UBERON:0001007!7.59e-07!128;UBERON:0001555!7.59e-07!128;UBERON:0007026!7.59e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!1.69e-36!15;UBERON:0001242!2.38e-28!13;UBERON:0000060!2.38e-28!13;UBERON:0001262!2.38e-28!13;UBERON:0004786!2.38e-28!13;UBERON:0004923!3.15e-22!24;UBERON:0000160!5.65e-19!43;UBERON:0003350!1.95e-18!9;UBERON:0004808!1.95e-18!9;UBERON:0001277!1.95e-18!9;UBERON:0000331!4.13e-15!3;UBERON:0002116!4.13e-15!3;UBERON:0001204!4.13e-15!3;UBERON:0001168!4.13e-15!3;UBERON:0000485!5.16e-15!11;UBERON:0005409!3.02e-13!59;UBERON:0001962!2.47e-10!2;UBERON:0001961!2.47e-10!2;UBERON:0001744!2.47e-10!2;UBERON:0002465!3.62e-07!3;UBERON:0001007!7.59e-07!128;UBERON:0001555!7.59e-07!128;UBERON:0007026!7.59e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.91e-33,15;UBERON:0001242,2.33e-29,13;UBERON:0001262,2.33e-29,13;UBERON:0004786,2.33e-29,13;UBERON:0000331,2.83e-24,3;UBERON:0002116,2.83e-24,3;UBERON:0001204,2.83e-24,3;UBERON:0001168,2.83e-24,3;UBERON:0004923,1.59e-20,24;UBERON:0002108,2.15e-18,4;UBERON:0003350,2.14e-14,9;UBERON:0004808,2.14e-14,9;UBERON:0001277,2.14e-14,9;UBERON:0000160,3.67e-12,31;UBERON:0000485,7.65e-12,11;UBERON:0003199,4.39e-09,1;UBERON:0005409,6.87e-08,47 | |||
|phase1_expression=0,3.48975407639361,4.09499315450582,1.51232105653415,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,5.16808767703518,6.8921919385452,4.95583835177545,1.71021077510736,4.78857246543868,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,4.09499315450582,1.51232105653415,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.60586496747019,5.16808767703518,6.8921919385452,4.95583835177545,1.71021077510736,4.78857246543868,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:24219966..24219970,+ | |short_description=p@chr11:24219966..24219970,+ | ||
}} | }} |
Revision as of 15:20, 14 November 2012
Short description: | p@chr11:24219966..24219970, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:24219966..24219970, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.46e-25 | 3 |
brush border epithelial cell | 2.18e-21 | 6 |
gut absorptive cell | 2.18e-21 | 6 |
enterocyte | 2.18e-21 | 6 |
columnar/cuboidal epithelial cell | 2.15e-18 | 7 |
epithelial cell | 1.64e-15 | 25 |
intestinal epithelial cell | 2.14e-14 | 9 |
epithelial cell of alimentary canal | 2.14e-14 | 9 |
defensive cell | 2.45e-11 | 7 |
endo-epithelial cell | 9.14e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.91e-33 | 15 |
intestinal mucosa | 2.33e-29 | 13 |
wall of intestine | 2.33e-29 | 13 |
gastrointestinal system mucosa | 2.33e-29 | 13 |
ileal mucosa | 2.83e-24 | 3 |
ileum | 2.83e-24 | 3 |
mucosa of small intestine | 2.83e-24 | 3 |
wall of small intestine | 2.83e-24 | 3 |
organ component layer | 1.59e-20 | 24 |
small intestine | 2.15e-18 | 4 |
epithelium of mucosa | 2.14e-14 | 9 |
gastrointestinal system epithelium | 2.14e-14 | 9 |
intestinal epithelium | 2.14e-14 | 9 |
intestine | 3.67e-12 | 31 |
simple columnar epithelium | 7.65e-12 | 11 |
egg chamber | 4.39e-09 | 1 |
gastrointestinal system | 6.87e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.