FFCP PHASE1:Mm9::chr6:86619104..86619119,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:86619104..86619119,- | |id=chr6:86619104..86619119,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.41e-11!59;UBERON:0004923!5.74e-11!24;UBERON:0000344!3.39e-08!15;UBERON:0000160!1.25e-07!43;UBERON:0004119!1.92e-07!130;UBERON:0000925!1.92e-07!130;UBERON:0006595!1.92e-07!130;UBERON:0001007!4.50e-07!128;UBERON:0001555!4.50e-07!128;UBERON:0007026!4.50e-07!128;UBERON:0001242!4.64e-07!13;UBERON:0000060!4.64e-07!13;UBERON:0001262!4.64e-07!13;UBERON:0004786!4.64e-07!13 | |ontology_enrichment_uberon=UBERON:0005409!2.41e-11!59;UBERON:0004923!5.74e-11!24;UBERON:0000344!3.39e-08!15;UBERON:0000160!1.25e-07!43;UBERON:0004119!1.92e-07!130;UBERON:0000925!1.92e-07!130;UBERON:0006595!1.92e-07!130;UBERON:0001007!4.50e-07!128;UBERON:0001555!4.50e-07!128;UBERON:0007026!4.50e-07!128;UBERON:0001242!4.64e-07!13;UBERON:0000060!4.64e-07!13;UBERON:0001262!4.64e-07!13;UBERON:0004786!4.64e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.43e-15,47;UBERON:0000160,3.15e-11,31;UBERON:0004923,5.73e-11,24;UBERON:0004119,1.47e-08,118;UBERON:0000925,1.47e-08,118;UBERON:0006595,1.47e-08,118;UBERON:0000344,3.39e-08,15;UBERON:0001007,3.66e-08,116;UBERON:0001555,3.66e-08,116;UBERON:0007026,3.66e-08,116;UBERON:0004921,2.05e-07,114;UBERON:0001242,4.64e-07,13;UBERON:0001262,4.64e-07,13;UBERON:0004786,4.64e-07,13 | |||
|phase1_expression=5.60520964866779,2099.78502776604,2225.85627909361,1365.02098562772,1676.99890386037,439.340054593416,387.563370747977,21.950964985068,51.6694610296617,71.857809580852,1.19852577757853,1.83475965689274,4.45121897821135,4.45844052336887,77.2814647412337,85.4445628385066,54.5658264939954,9.30613387806801,6.30726394586398,21.6438722416995,12.6714502325094,5.75887516965135,1.30599894569468,453.418526196515,529.476620703028,1497.59696241197,1024.78278886244,896.144856740612,553.728244295874,556.230496380167,481.598669143322,21.5910428976275,12.916360539276,15.8481681015439,7.79899373328441,7.31432439577366,22.4586291888606,1404.17362112233,922.757041882608,793.661995864278,1799.9883533749,1657.06834650919,974.419278533525,1.38486499773135,3.04130793658544,2.20256102594018,19.559783608701,3.70642765846759,3.73466510648602,3.69416808241138,6.01941612989059,4.31257693094915,11.5769998179838,105.902872733656,46.7170380808025,2.57259436035947,2.57880095944881,2.57836046138721,2.83243045203437,2.11596391708813,3.1691570175309,10.165335962074,17.7858959222228,0.899899717281399,3.9554654502679,4.9733608046227,2.39680088414724,1.53687322128622,3.00699875694585,2.8351247049655,1.68259969081106,7.14127461009509,5.96345060569357,2.08234358665422,1.82106394934649,0.919218786610021,3.30347642998166,4.59674417106676,4.6081959976873,3.42904348098504,2.10421580285542,2.08365348222704,5.30447698102624,5.6276261003168,3.0559649555362,6.18720029494702,4.27115042397309,2.23679334990361,2.42323818666189,2.79614772395106,31.0155002910795,1.72084775396277,20.3991400112325,2.69851595818909,2.59910566979068,3.13618820968135,39.3244376368905,1.02258193546835,1.55871602761721,0.35333957451034,3.38024207464033,1.28326477414318,5.09610479413291,0,6.27824018932521,6.08063677140237,6.0662933401774,124.346245014056,47.9035084747268,1.92974780784272,2.60227990149204,4.56698217468212,6.45723392316964,2.56228488939458,5.40908052824242,1.75933227861546,42.7647294180467,6.65157041831594,157.460678247078,12.2942805960031,45.7141943213015,50.4270263260631,544.263942756917,1.75668478206928,3.35114730901528,660.611944769417,26.9584030138321,21.5964983157627,27.447169047782,4.79330046095433,3.20250421973039,1.38219787324151,2.25971616249959,1.02286182932132,2.28566849015516,4.2182728397617,3.25885964321012,44.6621024490234,1.51633655060205,14.7309299120532,2.34216797332867,3.67843367093557,3.96136685571768,9.0422890701429,11.3620953582718,11.6583485459213,13.7741535102801,34.1488449375501,2.37124792226126,2.83659120251729,2.11141348996739,1.7535658594206,2.22437799380478,27.8601733217733,36.217656007798,4.77682240364384,17.5553296828309,24.7053990830127,21.596425954065,2.89976081549703,3.98694301967864,2.70093092191522,3.55117103377815,2.16440654922144,2.1597395804233,1.62773761325285,2.95100741539581,3.03589890154641,1.81015834904829,1.31333971263276,2.43206428637567,3.36259971078264,2.63460138349261,1.74468344388483,2.10289948564127,1.54356918568927,1276.07733988343,373.668650695588,2.77274725695804,3.71578674976702,3.60828891701861,12.3026950020239,18.2349995952794,38.9962533530746,419.483690405348,39.3630501790386,70.6251936728757,91.5199771389294,92.9978695558203,467.386092500195,380.402967779462,374.38559371821,3.41402221715547,3.65595240351132,1.1270773567308,1.22190796707189,2.90928730751439,3.08597607517402,2.27651533647326,1.77132177575523,2.04098346193787,3.70191491765402,4.15033677922008,15.1829046201646,25.9457873549428,31.0309715091098,42.3977653701971,59.3295812990945,64.1657146489178,56.6761390778097,29.5086112730564,14.8263163121564,14.3768206527355,7.81495990103857,5.30464044294753,2.27320990152401,2.15276896226295,2.8946611281802,34.5488465611551,3.03186258832776,2.60743962307241,2.54617628662782,3.28566347603903,3.85264392116176,7.37935286746643,16.7814937157707,13.7142575372386,8.858587585951,8.92946704481928,19.0081445070256,11.569893785015,8.82359257347221,3.01582567878545,3.26343410291226,3.93411418415229,5.79467167239938,4.17431533968259,4.45404409050372,0.819674726883377,5.04941854408746,6.94118082715765,3.51394869866975,5.38558494331997,5.9742199488138,6.68396022247182,6.79383673893198,7.2865926301481,6.42962887404886,10.2774822266096,1.60660658210904,5.10984306749767,5.1639025063504,4.23506094319298,10.0631775013247,5.30980553359851,5.09839335925461,4.23252979750651,7.35559811048003,5.61073596473468,6.45613810682248,13.4382712447475,4.72593848320757,5.70395805415554,3.47640433729398,7.37930260024991,2.06271086496374,1.70219802876894,3.96134406868882,2.8458910432206,2.57204442037911,3.01478397191865,3.0322698992352,2.79733335023606,5.78483403317739,65.4734065497752,12.0744280392378,12.5701186891328,68.7575674765972,42.788073074415,31.0008434130721,48.7039163532797,81.0856044740603,275.449390615209,5.93360966433631,73.4744787430767,15.0662413613152,79.4484522416063,65.5522230376325,56.4547160487834,76.183131677772,47.7639388282733,54.3011635015793,54.5889896527474,210.98220658134,2.05618395827738,4.26970880966382,10.1525020372493,50.5993676355014,43.6725127492355,33.5812222498204,47.0298163077161,121.193001138606,379.253411851786,2.4853572523477,9.58277995763124,11.0642244072544,6.45288112782681,4.4723773319131,6.71631082084202,6.58928889414035,11.9704383418669,11.8485990207995,23.1739151180821,13.5287107662563,10.3690802252832,9.48033361884535,2.02725215290164,2.36235201479103,3.50786222040047,3.58053391334963,4.96703386953162,6.61074972359829,5.90758108698309,7.77441664600737,5.18206285253999,6.85618058930516,17.0551291294567,9.81360784731361,10.5189211963412,75.5012177438654,0.887943813496259,0.358855426437903,0.503653849092235,1.35232715822533,11.0732660516197,21.2455884150028,292.612837442925,1.50471631210609,5.0827665835536,2.30162618253588,5.72895513439397,3.78077001156113,2.05524755931193,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,1.55328093525546,2.69847103718859,3.19219898720825,5.12200817262403,13.3708694387562,6.07878171621149,13.052889099951,15.5572709461131,13.8043488350059,15.4041220604071,15.6672271293554,17.2365923925363,11.6948331659367,13.0161695383137,11.9727034997106,11.0276100394777,12.3836359733599,14.4855407431069,10.6100071255038,14.835092428919,14.2782952530365,12.343293085875,11.7134032065163,18.598022815891,15.4067201630268,13.6458601602229,13.2844934389932,14.2683818840763,11.0489278803894,15.6174730922741,16.2731258780744,13.7616621024042,15.9577261448413,11.867700251921,12.2400104536913,19.097754487133,19.2354145012218,16.609144199624,22.346589621023,10.7121465958552,16.7649478530832,14.1439379728457 | |phase1_expression=5.60520964866779,2099.78502776604,2225.85627909361,1365.02098562772,1676.99890386037,439.340054593416,387.563370747977,21.950964985068,51.6694610296617,71.857809580852,1.19852577757853,1.83475965689274,4.45121897821135,4.45844052336887,77.2814647412337,85.4445628385066,54.5658264939954,9.30613387806801,6.30726394586398,21.6438722416995,12.6714502325094,5.75887516965135,1.30599894569468,453.418526196515,529.476620703028,1497.59696241197,1024.78278886244,896.144856740612,553.728244295874,556.230496380167,481.598669143322,21.5910428976275,12.916360539276,15.8481681015439,7.79899373328441,7.31432439577366,22.4586291888606,1404.17362112233,922.757041882608,793.661995864278,1799.9883533749,1657.06834650919,974.419278533525,1.38486499773135,3.04130793658544,2.20256102594018,19.559783608701,3.70642765846759,3.73466510648602,3.69416808241138,6.01941612989059,4.31257693094915,11.5769998179838,105.902872733656,46.7170380808025,2.57259436035947,2.57880095944881,2.57836046138721,2.83243045203437,2.11596391708813,3.1691570175309,10.165335962074,17.7858959222228,0.899899717281399,3.9554654502679,4.9733608046227,2.39680088414724,1.53687322128622,3.00699875694585,2.8351247049655,1.68259969081106,7.14127461009509,5.96345060569357,2.08234358665422,1.82106394934649,0.919218786610021,3.30347642998166,4.59674417106676,4.6081959976873,3.42904348098504,2.10421580285542,2.08365348222704,5.30447698102624,5.6276261003168,3.0559649555362,6.18720029494702,4.27115042397309,2.23679334990361,2.42323818666189,2.79614772395106,31.0155002910795,1.72084775396277,20.3991400112325,2.69851595818909,2.59910566979068,3.13618820968135,39.3244376368905,1.02258193546835,1.55871602761721,0.35333957451034,3.38024207464033,1.28326477414318,5.09610479413291,0,6.27824018932521,6.08063677140237,6.0662933401774,124.346245014056,47.9035084747268,1.92974780784272,2.60227990149204,4.56698217468212,6.45723392316964,2.56228488939458,5.40908052824242,1.75933227861546,42.7647294180467,6.65157041831594,157.460678247078,12.2942805960031,45.7141943213015,50.4270263260631,544.263942756917,1.75668478206928,3.35114730901528,660.611944769417,26.9584030138321,21.5964983157627,27.447169047782,4.79330046095433,3.20250421973039,1.38219787324151,2.25971616249959,1.02286182932132,2.28566849015516,4.2182728397617,3.25885964321012,44.6621024490234,1.51633655060205,14.7309299120532,2.34216797332867,3.67843367093557,3.96136685571768,9.0422890701429,11.3620953582718,11.6583485459213,13.7741535102801,34.1488449375501,2.37124792226126,2.83659120251729,2.11141348996739,1.7535658594206,2.22437799380478,27.8601733217733,36.217656007798,4.77682240364384,17.5553296828309,24.7053990830127,21.596425954065,2.89976081549703,3.98694301967864,2.70093092191522,3.55117103377815,2.16440654922144,2.1597395804233,1.62773761325285,2.95100741539581,3.03589890154641,1.81015834904829,1.31333971263276,2.43206428637567,3.36259971078264,2.63460138349261,1.74468344388483,2.10289948564127,1.54356918568927,1276.07733988343,373.668650695588,2.77274725695804,3.71578674976702,3.60828891701861,12.3026950020239,18.2349995952794,38.9962533530746,419.483690405348,39.3630501790386,70.6251936728757,91.5199771389294,92.9978695558203,467.386092500195,380.402967779462,374.38559371821,3.41402221715547,3.65595240351132,1.1270773567308,1.22190796707189,2.90928730751439,3.08597607517402,2.27651533647326,1.77132177575523,2.04098346193787,3.70191491765402,4.15033677922008,15.1829046201646,25.9457873549428,31.0309715091098,42.3977653701971,59.3295812990945,64.1657146489178,56.6761390778097,29.5086112730564,14.8263163121564,14.3768206527355,7.81495990103857,5.30464044294753,2.27320990152401,2.15276896226295,2.8946611281802,34.5488465611551,3.03186258832776,2.60743962307241,2.54617628662782,3.28566347603903,3.85264392116176,7.37935286746643,16.7814937157707,13.7142575372386,8.858587585951,8.92946704481928,19.0081445070256,11.569893785015,8.82359257347221,3.01582567878545,3.26343410291226,3.93411418415229,5.79467167239938,4.17431533968259,4.45404409050372,0.819674726883377,5.04941854408746,6.94118082715765,3.51394869866975,5.38558494331997,5.9742199488138,6.68396022247182,6.79383673893198,7.2865926301481,6.42962887404886,10.2774822266096,1.60660658210904,5.10984306749767,5.1639025063504,4.23506094319298,10.0631775013247,5.30980553359851,5.09839335925461,4.23252979750651,7.35559811048003,5.61073596473468,6.45613810682248,13.4382712447475,4.72593848320757,5.70395805415554,3.47640433729398,7.37930260024991,2.06271086496374,1.70219802876894,3.96134406868882,2.8458910432206,2.57204442037911,3.01478397191865,3.0322698992352,2.79733335023606,5.78483403317739,65.4734065497752,12.0744280392378,12.5701186891328,68.7575674765972,42.788073074415,31.0008434130721,48.7039163532797,81.0856044740603,275.449390615209,5.93360966433631,73.4744787430767,15.0662413613152,79.4484522416063,65.5522230376325,56.4547160487834,76.183131677772,47.7639388282733,54.3011635015793,54.5889896527474,210.98220658134,2.05618395827738,4.26970880966382,10.1525020372493,50.5993676355014,43.6725127492355,33.5812222498204,47.0298163077161,121.193001138606,379.253411851786,2.4853572523477,9.58277995763124,11.0642244072544,6.45288112782681,4.4723773319131,6.71631082084202,6.58928889414035,11.9704383418669,11.8485990207995,23.1739151180821,13.5287107662563,10.3690802252832,9.48033361884535,2.02725215290164,2.36235201479103,3.50786222040047,3.58053391334963,4.96703386953162,6.61074972359829,5.90758108698309,7.77441664600737,5.18206285253999,6.85618058930516,17.0551291294567,9.81360784731361,10.5189211963412,75.5012177438654,0.887943813496259,0.358855426437903,0.503653849092235,1.35232715822533,11.0732660516197,21.2455884150028,292.612837442925,1.50471631210609,5.0827665835536,2.30162618253588,5.72895513439397,3.78077001156113,2.05524755931193,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,1.55328093525546,2.69847103718859,3.19219898720825,5.12200817262403,13.3708694387562,6.07878171621149,13.052889099951,15.5572709461131,13.8043488350059,15.4041220604071,15.6672271293554,17.2365923925363,11.6948331659367,13.0161695383137,11.9727034997106,11.0276100394777,12.3836359733599,14.4855407431069,10.6100071255038,14.835092428919,14.2782952530365,12.343293085875,11.7134032065163,18.598022815891,15.4067201630268,13.6458601602229,13.2844934389932,14.2683818840763,11.0489278803894,15.6174730922741,16.2731258780744,13.7616621024042,15.9577261448413,11.867700251921,12.2400104536913,19.097754487133,19.2354145012218,16.609144199624,22.346589621023,10.7121465958552,16.7649478530832,14.1439379728457 | ||
|short_description=p1@Mxd1 | |short_description=p1@Mxd1 | ||
}} | }} |
Revision as of 16:15, 14 November 2012
Short description: | p1@Mxd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mxd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 33bp_to_ENSMUST00000001184, NM_010751, uc009csh.2, uc009csi.2_5end |
EntrezGene: | Mxd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.43e-15 | 47 |
intestine | 3.15e-11 | 31 |
organ component layer | 5.73e-11 | 24 |
endoderm-derived structure | 1.47e-08 | 118 |
endoderm | 1.47e-08 | 118 |
presumptive endoderm | 1.47e-08 | 118 |
mucosa | 3.39e-08 | 15 |
digestive system | 3.66e-08 | 116 |
digestive tract | 3.66e-08 | 116 |
primitive gut | 3.66e-08 | 116 |
subdivision of digestive tract | 2.05e-07 | 114 |
intestinal mucosa | 4.64e-07 | 13 |
wall of intestine | 4.64e-07 | 13 |
gastrointestinal system mucosa | 4.64e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.