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FFCP PHASE1:Mm9::chr7:82453803..82453825,-: Difference between revisions

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|id=chr7:82453803..82453825,-
|id=chr7:82453803..82453825,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.99e-25!63;UBERON:0003056!7.38e-21!49;UBERON:0000073!2.38e-20!75;UBERON:0001016!2.38e-20!75;UBERON:0002346!2.98e-20!71;UBERON:0003075!2.98e-20!71;UBERON:0007284!2.98e-20!71;UBERON:0001049!5.32e-20!52;UBERON:0005068!5.32e-20!52;UBERON:0006241!5.32e-20!52;UBERON:0007135!5.32e-20!52;UBERON:0001017!7.41e-20!73;UBERON:0005743!7.41e-20!73;UBERON:0000955!5.15e-19!50;UBERON:0006238!5.15e-19!50;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0002616!2.32e-18!49;UBERON:0007811!1.76e-15!86;UBERON:0003080!9.41e-15!40;UBERON:0002020!1.27e-14!34;UBERON:0000153!3.89e-14!94;UBERON:0002780!3.98e-14!39;UBERON:0001890!3.98e-14!39;UBERON:0006240!3.98e-14!39;UBERON:0002791!8.67e-12!29;UBERON:0003528!8.67e-12!29;UBERON:0001893!8.67e-12!29;UBERON:0002021!1.35e-09!10;UBERON:0000411!1.35e-09!10;UBERON:0001950!1.35e-09!10;UBERON:0002619!2.78e-08!17;UBERON:0000956!2.82e-08!21;UBERON:0001869!2.82e-08!21;UBERON:0000203!2.82e-08!21;UBERON:0000970!2.33e-07!9;UBERON:0000019!2.33e-07!9;UBERON:0000047!2.33e-07!9;UBERON:0004088!2.33e-07!9;UBERON:0002104!2.33e-07!9;UBERON:0001456!2.33e-07!9;UBERON:0003072!2.33e-07!9;UBERON:0003071!2.33e-07!9;UBERON:0004128!2.33e-07!9;UBERON:0000020!2.79e-07!12;UBERON:0001032!2.79e-07!12;UBERON:0004456!2.79e-07!12
|ontology_enrichment_uberon=UBERON:0000033!4.99e-25!63;UBERON:0003056!7.38e-21!49;UBERON:0000073!2.38e-20!75;UBERON:0001016!2.38e-20!75;UBERON:0002346!2.98e-20!71;UBERON:0003075!2.98e-20!71;UBERON:0007284!2.98e-20!71;UBERON:0001049!5.32e-20!52;UBERON:0005068!5.32e-20!52;UBERON:0006241!5.32e-20!52;UBERON:0007135!5.32e-20!52;UBERON:0001017!7.41e-20!73;UBERON:0005743!7.41e-20!73;UBERON:0000955!5.15e-19!50;UBERON:0006238!5.15e-19!50;UBERON:0004121!1.10e-18!102;UBERON:0000924!1.10e-18!102;UBERON:0006601!1.10e-18!102;UBERON:0002616!2.32e-18!49;UBERON:0007811!1.76e-15!86;UBERON:0003080!9.41e-15!40;UBERON:0002020!1.27e-14!34;UBERON:0000153!3.89e-14!94;UBERON:0002780!3.98e-14!39;UBERON:0001890!3.98e-14!39;UBERON:0006240!3.98e-14!39;UBERON:0002791!8.67e-12!29;UBERON:0003528!8.67e-12!29;UBERON:0001893!8.67e-12!29;UBERON:0002021!1.35e-09!10;UBERON:0000411!1.35e-09!10;UBERON:0001950!1.35e-09!10;UBERON:0002619!2.78e-08!17;UBERON:0000956!2.82e-08!21;UBERON:0001869!2.82e-08!21;UBERON:0000203!2.82e-08!21;UBERON:0000970!2.33e-07!9;UBERON:0000019!2.33e-07!9;UBERON:0000047!2.33e-07!9;UBERON:0004088!2.33e-07!9;UBERON:0002104!2.33e-07!9;UBERON:0001456!2.33e-07!9;UBERON:0003072!2.33e-07!9;UBERON:0003071!2.33e-07!9;UBERON:0004128!2.33e-07!9;UBERON:0000020!2.79e-07!12;UBERON:0001032!2.79e-07!12;UBERON:0004456!2.79e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.69e-30,64;UBERON:0003075,3.69e-30,64;UBERON:0007284,3.69e-30,64;UBERON:0000073,6.94e-28,54;UBERON:0010371,7.14e-27,73;UBERON:0001049,2.92e-25,52;UBERON:0005068,2.92e-25,52;UBERON:0006241,2.92e-25,52;UBERON:0007135,2.92e-25,52;UBERON:0004121,5.27e-24,95;UBERON:0000924,5.27e-24,95;UBERON:0006601,5.27e-24,95;UBERON:0001017,2.28e-21,73;UBERON:0001016,1.46e-20,75;UBERON:0003056,2.01e-20,49;UBERON:0000955,1.28e-19,47;UBERON:0006238,1.28e-19,47;UBERON:0010314,2.41e-19,92;UBERON:0002021,3.31e-19,10;UBERON:0000411,3.31e-19,10;UBERON:0001950,3.31e-19,10;UBERON:0002020,4.80e-19,34;UBERON:0002616,1.77e-18,46;UBERON:0003080,2.23e-14,40;UBERON:0003528,1.28e-13,29;UBERON:0002791,1.28e-13,29;UBERON:0001893,1.28e-13,29;UBERON:0002780,2.54e-13,39;UBERON:0001890,2.54e-13,39;UBERON:0006240,2.54e-13,39;UBERON:0003076,9.05e-13,12;UBERON:0003057,9.05e-13,12;UBERON:0002619,2.26e-12,17;UBERON:0000956,1.59e-11,21;UBERON:0001869,1.59e-11,21;UBERON:0000203,1.59e-11,21;UBERON:0002240,5.53e-09,6;UBERON:0005174,5.53e-09,6;UBERON:0001137,5.53e-09,6;UBERON:0000025,1.02e-08,114;UBERON:0004111,2.47e-08,122;UBERON:0007023,1.60e-07,51;UBERON:0001948,1.70e-07,5;UBERON:0002315,1.70e-07,5;UBERON:0000970,2.47e-07,9;UBERON:0000019,2.47e-07,9;UBERON:0000047,2.47e-07,9;UBERON:0010312,2.47e-07,9;UBERON:0004088,2.47e-07,9;UBERON:0002104,2.47e-07,9;UBERON:0001456,2.47e-07,9;UBERON:0003072,2.47e-07,9;UBERON:0004128,2.47e-07,9;UBERON:0003071,2.47e-07,9;UBERON:0002950,4.77e-07,4;UBERON:0001891,4.77e-07,4;UBERON:0009616,4.77e-07,4;UBERON:0010286,4.77e-07,4;UBERON:0000020,7.44e-07,12;UBERON:0001032,7.44e-07,12;UBERON:0004456,7.44e-07,12
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.671130424230945,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.99955689082663,2.42955395046775,0.244981598429908,0.0958454710182364,0,4.40463523997555,5.74593021383345,4.14737639791857,0.263772575460388,0.914876436024097,0.52091337055676,5.58365998002762,2.8138130501584,2.59757021220577,1.17851434189467,1.42371680799103,1.67759501242771,0.075726193333184,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,11.4184510834503,12.5668024088073,0,0,0,0,3.59497534571574,5.49000723382352,0.125654352112864,13.210648334613,10.7400492078739,7.2725815595846,5.19172041816825,0,0,2.27450482590307,23.3590460033986,0.910843100738926,0.689706313300419,0.900310649026746,3.76762044589288,4.28629944653366,7.43059577652129,8.62055865949505,50.4471572941081,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,7.3843362553088,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,3.21321316421807,0.851640511249612,0.35613120733451,0.488660878060728,1.48473110675282,0,0,0,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,5.44703369206061,0.540183282093931,0,0,0.177340233642274,0.713475270408282,0.822745103010605,0.608929898229199,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,5.56275906031529,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,2.43987218086537,5.86085197655248,0.643105137237198,0,10.1655331671072,7.36520378411483,9.16632821503035,8.42080593484069,8.90607275701835,12.8416962556249,8.77529250301348,18.0128481289688,15.406841905463,12.9440077937955,0,0,0,0.243106717068294,0,0,1.11123363900808,1.64828045791115,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.631790158511746,0.476293691283074,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.658765662907314,0.25384382367503,0.365855945745545,1.05227884575137,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,1.74867404556562,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.671130424230945,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.99955689082663,2.42955395046775,0.244981598429908,0.0958454710182364,0,4.40463523997555,5.74593021383345,4.14737639791857,0.263772575460388,0.914876436024097,0.52091337055676,5.58365998002762,2.8138130501584,2.59757021220577,1.17851434189467,1.42371680799103,1.67759501242771,0.075726193333184,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,11.4184510834503,12.5668024088073,0,0,0,0,3.59497534571574,5.49000723382352,0.125654352112864,13.210648334613,10.7400492078739,7.2725815595846,5.19172041816825,0,0,2.27450482590307,23.3590460033986,0.910843100738926,0.689706313300419,0.900310649026746,3.76762044589288,4.28629944653366,7.43059577652129,8.62055865949505,50.4471572941081,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,0.411618449517138,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,7.3843362553088,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0.395287777946524,3.21321316421807,0.851640511249612,0.35613120733451,0.488660878060728,1.48473110675282,0,0,0,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,5.44703369206061,0.540183282093931,0,0,0.177340233642274,0.713475270408282,0.822745103010605,0.608929898229199,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,5.56275906031529,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,2.43987218086537,5.86085197655248,0.643105137237198,0,10.1655331671072,7.36520378411483,9.16632821503035,8.42080593484069,8.90607275701835,12.8416962556249,8.77529250301348,18.0128481289688,15.406841905463,12.9440077937955,0,0,0,0.243106717068294,0,0,1.11123363900808,1.64828045791115,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.187283014939765,0.640251524048693,0.631790158511746,0.476293691283074,0.463537303779422,0,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.658765662907314,0.25384382367503,0.365855945745545,1.05227884575137,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0.578719832943424,1.74867404556562,0.467863216890817,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843
|short_description=p5@Sv2b
|short_description=p5@Sv2b
}}
}}

Revision as of 07:33, 14 November 2012

Short description:p5@Sv2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sv2b_5end
Coexpression cluster:MCL_coexpression_mm9:694
Association with transcript: 322bp_to_ENSMUST00000165175, NM_153579, uc009hwl.1_5end
EntrezGene:Sv2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sv2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G423.36
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.29
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A250.45
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A37.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm3.69e-3064
neural plate3.69e-3064
presumptive neural plate3.69e-3064
regional part of nervous system6.94e-2854
ecto-epithelium7.14e-2773
neural tube2.92e-2552
neural rod2.92e-2552
future spinal cord2.92e-2552
neural keel2.92e-2552
ectoderm-derived structure5.27e-2495
ectoderm5.27e-2495
presumptive ectoderm5.27e-2495
central nervous system2.28e-2173
nervous system1.46e-2075
pre-chordal neural plate2.01e-2049
brain1.28e-1947
future brain1.28e-1947
structure with developmental contribution from neural crest2.41e-1992
occipital lobe3.31e-1910
visual cortex3.31e-1910
neocortex3.31e-1910
gray matter4.80e-1934
regional part of brain1.77e-1846
anterior neural tube2.23e-1440
brain grey matter1.28e-1329
regional part of telencephalon1.28e-1329
telencephalon1.28e-1329
regional part of forebrain2.54e-1339
forebrain2.54e-1339
future forebrain2.54e-1339
posterior neural tube9.05e-1312
chordal neural plate9.05e-1312
regional part of cerebral cortex2.26e-1217
cerebral cortex1.59e-1121
cerebral hemisphere1.59e-1121
pallium1.59e-1121
spinal cord5.53e-096
dorsal region element5.53e-096
dorsum5.53e-096
tube1.02e-08114
anatomical conduit2.47e-08122
adult organism1.60e-0751
regional part of spinal cord1.70e-075
gray matter of spinal cord1.70e-075
eye2.47e-079
camera-type eye2.47e-079
simple eye2.47e-079
immature eye2.47e-079
ocular region2.47e-079
visual system2.47e-079
face2.47e-079
optic cup2.47e-079
optic vesicle2.47e-079
eye primordium2.47e-079
regional part of midbrain4.77e-074
midbrain4.77e-074
presumptive midbrain4.77e-074
midbrain neural tube4.77e-074
sense organ7.44e-0712
sensory system7.44e-0712
entire sense organ system7.44e-0712







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