FFCP PHASE1:Mm9::chr6:78331833..78331835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:78331833..78331835,+ | |id=chr6:78331833..78331835,+ | ||
|ontology_enrichment_celltype=CL:0000239!7.57e-16!6;CL:0000677!7.57e-16!6;CL:0000212!7.57e-16!6;CL:0000584!7.57e-16!6;CL:0002563!1.16e-14!9;CL:0002251!1.16e-14!9;CL:0000075!1.46e-13!7;CL:0000473!2.31e-12!3;CL:0000627!2.31e-12!3;CL:0000682!2.31e-12!3;CL:0000066!4.73e-11!25;CL:0002076!1.33e-08!15 | |ontology_enrichment_celltype=CL:0000239!7.57e-16!6;CL:0000677!7.57e-16!6;CL:0000212!7.57e-16!6;CL:0000584!7.57e-16!6;CL:0002563!1.16e-14!9;CL:0002251!1.16e-14!9;CL:0000075!1.46e-13!7;CL:0000473!2.31e-12!3;CL:0000627!2.31e-12!3;CL:0000682!2.31e-12!3;CL:0000066!4.73e-11!25;CL:0002076!1.33e-08!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.52e-09,6;CL:0000677,9.52e-09,6;CL:0000584,9.52e-09,6;CL:0000682,2.37e-08,3;CL:0000075,1.44e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.44e-30!15;UBERON:0000160!1.91e-23!43;UBERON:0001242!4.74e-23!13;UBERON:0000060!4.74e-23!13;UBERON:0001262!4.74e-23!13;UBERON:0004786!4.74e-23!13;UBERON:0004923!6.12e-18!24;UBERON:0005409!2.84e-16!59;UBERON:0003350!1.16e-14!9;UBERON:0004808!1.16e-14!9;UBERON:0001277!1.16e-14!9;UBERON:0000331!3.14e-13!3;UBERON:0002116!3.14e-13!3;UBERON:0001204!3.14e-13!3;UBERON:0001168!3.14e-13!3;UBERON:0000485!6.53e-12!11;UBERON:0001962!6.59e-09!2;UBERON:0001961!6.59e-09!2;UBERON:0001744!6.59e-09!2;UBERON:0002108!1.33e-08!16;UBERON:0001007!8.13e-08!128;UBERON:0001555!8.13e-08!128;UBERON:0007026!8.13e-08!128;UBERON:0004119!1.21e-07!130;UBERON:0000925!1.21e-07!130;UBERON:0006595!1.21e-07!130 | |ontology_enrichment_uberon=UBERON:0000344!8.44e-30!15;UBERON:0000160!1.91e-23!43;UBERON:0001242!4.74e-23!13;UBERON:0000060!4.74e-23!13;UBERON:0001262!4.74e-23!13;UBERON:0004786!4.74e-23!13;UBERON:0004923!6.12e-18!24;UBERON:0005409!2.84e-16!59;UBERON:0003350!1.16e-14!9;UBERON:0004808!1.16e-14!9;UBERON:0001277!1.16e-14!9;UBERON:0000331!3.14e-13!3;UBERON:0002116!3.14e-13!3;UBERON:0001204!3.14e-13!3;UBERON:0001168!3.14e-13!3;UBERON:0000485!6.53e-12!11;UBERON:0001962!6.59e-09!2;UBERON:0001961!6.59e-09!2;UBERON:0001744!6.59e-09!2;UBERON:0002108!1.33e-08!16;UBERON:0001007!8.13e-08!128;UBERON:0001555!8.13e-08!128;UBERON:0007026!8.13e-08!128;UBERON:0004119!1.21e-07!130;UBERON:0000925!1.21e-07!130;UBERON:0006595!1.21e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.03e-23,15;UBERON:0000160,3.30e-20,31;UBERON:0000331,6.33e-18,3;UBERON:0002116,6.33e-18,3;UBERON:0001204,6.33e-18,3;UBERON:0001168,6.33e-18,3;UBERON:0001242,3.51e-15,13;UBERON:0001262,3.51e-15,13;UBERON:0004786,3.51e-15,13;UBERON:0004923,5.33e-14,24;UBERON:0002108,1.36e-13,4;UBERON:0005409,7.47e-13,47;UBERON:0001962,7.26e-12,2;UBERON:0001961,7.26e-12,2;UBERON:0001744,7.26e-12,2;UBERON:0002465,3.32e-08,3;UBERON:0003199,8.98e-07,1 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,3.0246421130683,2.50447864973174,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.2940928106717,0.57423196411502,3.4460959692726,1.72376986148711,3.42042155021473,3.52842181663903,3.10422714917427,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49565963328025,0,0,0,0,0,0,1.42358718463353,0,0,0,0,0,2.59365659849633,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,5.27093042874994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,3.0246421130683,2.50447864973174,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.2940928106717,0.57423196411502,3.4460959692726,1.72376986148711,3.42042155021473,3.52842181663903,3.10422714917427,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49565963328025,0,0,0,0,0,0,1.42358718463353,0,0,0,0,0,2.59365659849633,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,5.27093042874994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78331833..78331835,+ | |short_description=p@chr6:78331833..78331835,+ | ||
}} | }} |
Revision as of 08:23, 14 November 2012
Short description: | p@chr6:78331833..78331835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78331833..78331835, + |
Coexpression cluster: | MCL_coexpression_mm9:2450 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.52e-09 | 6 |
gut absorptive cell | 9.52e-09 | 6 |
enterocyte | 9.52e-09 | 6 |
M cell of gut | 2.37e-08 | 3 |
columnar/cuboidal epithelial cell | 1.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.03e-23 | 15 |
intestine | 3.30e-20 | 31 |
ileal mucosa | 6.33e-18 | 3 |
ileum | 6.33e-18 | 3 |
mucosa of small intestine | 6.33e-18 | 3 |
wall of small intestine | 6.33e-18 | 3 |
intestinal mucosa | 3.51e-15 | 13 |
wall of intestine | 3.51e-15 | 13 |
gastrointestinal system mucosa | 3.51e-15 | 13 |
organ component layer | 5.33e-14 | 24 |
small intestine | 1.36e-13 | 4 |
gastrointestinal system | 7.47e-13 | 47 |
gut-associated lymphoid tissue | 7.26e-12 | 2 |
mucosa-associated lymphoid tissue | 7.26e-12 | 2 |
lymphoid tissue | 7.26e-12 | 2 |
lymphoid system | 3.32e-08 | 3 |
egg chamber | 8.98e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.