MCL coexpression mm9:12: Difference between revisions
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|coexpression_dpi_cluster_scores_median=0,1.17490303556673,1.12336088739606,1.16467665652343,1.16209176333329,0.686745566711713,0.685795198633198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636449862691569,0,0,0.91379579307464,0.906752294700564,1.07592661396099,1.02022715758352,0.96886930637476,1.07657666805462,1.00316248451661,0.844273574247355,0,0,0,0.333529183982692,0.39726403477971,0.322473462254281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265446745265214,0,0,0,0,0,0,0,0,0,0,0.500989894871126,0,0,0,0,0,0,0,0,0.174463933976285,0,0,0,0,0,0.674662332002395,0,0,1.02968273310872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29705037517491,0.954636522626026,0,0,0.179972915045895,0.441295674346264,0.53733524595093,0.645821133000522,0.969580931024884,0.761647461715343,0.720634491908821,0.71416925181019,0.695546105005526,0.965858744469264,0.964412662340421,0.979854083251995,0,0,0,0,0,0.0294389011296462,0.0517208153718376,0.0597943799295356,0.0807198267409057,0.095794817833365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37400522539421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.083442441818608,0,0,0,0,0,0,0.894521254122593,0,0,0,0,0,0,0,0,0,0,0.202384099032941,0,0.00444746936895817,0.134479084503445,0.112217396353327,0.262295639742705,0.147550511820338,0.174908581800133,0.182845846232878,0.586860120707284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0115864737320477,0.00420815722159231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0236527734306106,0.0871588832444397,0.081359932135904,0.120876255993453,0.0978461107777356,0.098117166361508,0.0755201841556438,0.092061681821596,0.0990244263857601,0.0898139621139603,0.0762057619175924,0.0905291472420136,0.0766073954291401,0.0719221089710067,0.112067779638927,0.110848125941617,0.0869950425162207,0.092873634605593,0.0887324596487922,0.0756371087773857,0.0952990323199797,0.0729583017401753,0.101427320830301,0.104353329269123,0.0104109999230488,0.0924644954689594,0.0780974029773103,0.0639887569663241,0.0842686760102149,0.0766064454112358,0,0.123417463662485,0.155257708002722,0,0,0 | |coexpression_dpi_cluster_scores_median=0,1.17490303556673,1.12336088739606,1.16467665652343,1.16209176333329,0.686745566711713,0.685795198633198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636449862691569,0,0,0.91379579307464,0.906752294700564,1.07592661396099,1.02022715758352,0.96886930637476,1.07657666805462,1.00316248451661,0.844273574247355,0,0,0,0.333529183982692,0.39726403477971,0.322473462254281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265446745265214,0,0,0,0,0,0,0,0,0,0,0.500989894871126,0,0,0,0,0,0,0,0,0.174463933976285,0,0,0,0,0,0.674662332002395,0,0,1.02968273310872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29705037517491,0.954636522626026,0,0,0.179972915045895,0.441295674346264,0.53733524595093,0.645821133000522,0.969580931024884,0.761647461715343,0.720634491908821,0.71416925181019,0.695546105005526,0.965858744469264,0.964412662340421,0.979854083251995,0,0,0,0,0,0.0294389011296462,0.0517208153718376,0.0597943799295356,0.0807198267409057,0.095794817833365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37400522539421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.083442441818608,0,0,0,0,0,0,0.894521254122593,0,0,0,0,0,0,0,0,0,0,0.202384099032941,0,0.00444746936895817,0.134479084503445,0.112217396353327,0.262295639742705,0.147550511820338,0.174908581800133,0.182845846232878,0.586860120707284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0115864737320477,0.00420815722159231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0236527734306106,0.0871588832444397,0.081359932135904,0.120876255993453,0.0978461107777356,0.098117166361508,0.0755201841556438,0.092061681821596,0.0990244263857601,0.0898139621139603,0.0762057619175924,0.0905291472420136,0.0766073954291401,0.0719221089710067,0.112067779638927,0.110848125941617,0.0869950425162207,0.092873634605593,0.0887324596487922,0.0756371087773857,0.0952990323199797,0.0729583017401753,0.101427320830301,0.104353329269123,0.0104109999230488,0.0924644954689594,0.0780974029773103,0.0639887569663241,0.0842686760102149,0.0766064454112358,0,0.123417463662485,0.155257708002722,0,0,0 | ||
|gostat_on_MCL_coexpression=GO:0016020;membrane;2.28213621899327e-05;20732,67512,58994,64385,235135,18805,72759,72297,11740,218518,13728,104027,224912,215999,68338,11783,68667,217356,72431,22361,214359,72002,103694,70261,57170,171429,239759,16164,18591,58804,208677,67549,52585,13511,22035,71893,319880,75599,207839,232409,72074,21873,50528,12496,58176,18442,75541,20334,17161,17524,233549,228875,211798,58210,212070,237636,23959,66817,20459,214523,239853,16790,75604,106581,56388,170761,60363,70059,12695,433256,17380,69787,69601,53624,547431,58866,64381,70008,23991,54447,14917,30962,170706,71913,66261,19143,71779,11766,66889,72090,75212,72058,53897,13809,213233,20742,13076,11832,330962,319848,18703,433323,56643,74140,71601,19279,20500,20773,226999,12716,15203,19116,231549,353499,13139,56485,225115,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,99663,71908,66260,319565,94071,102103,73608,100038862,26941,224132,27375,66552,208884,243659,20351,20358,13518,56454,228576,71911,14367,13506,110172,21934,11981,212998,229782,83813,16147,74338,69259,72022,12557,17063,55979,18260,68267,380928,19882,54357,106766,71733,328133,109332,213989,93674,50784,74424,13482,66664,24059,102857,69162,17761,208092,72088,21802!GO:0005923;tight junction;2.28213621899327e-05;27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0043296;apical junction complex;2.28213621899327e-05;13511,27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0016327;apicolateral plasma membrane;2.61357771661251e-05;13511,27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0005911;intercellular junction;3.27840454069148e-05;13511,380928,13482,27375,75599,53624,21873,71908,218518,60363,72058,104027,18260,224912,12695!GO:0042578;phosphoric ester hydrolase activity;0.000206409248106748;245857,19211,58994,18805,69274,64899,19279,545622,66659,23959,50784,72748,23827,545902,238011,14120,18585!GO:0005903;brush border;0.000225711485109057;22349,58866,20537,13809,56226,226999!GO:0015291;secondary active transmembrane transporter activity;0.000844055606581827;229782,20537,15567,56485,56643,102857,171429,74338,12557,211798,110172,20500,68267,226999!GO:0008092;cytoskeletal protein binding;0.00084467365521306;20742,380928,54357,226251,17919,215280,104027,170833,17922,65970,225115,17761,18643,22349,13518,13419,107684!GO:0050892;intestinal absorption;0.00140869807324999;22337,11808,20537,233549!GO:0045177;apical part of cell;0.00142034700506896;72027,26941,20537,380928,170761,13809,224912,12695!GO:0016324;apical plasma membrane;0.00292601467977332;72027,26941,20537,380928,13809,224912!GO:0044425;membrane part;0.00399859986482624;20732,67512,58994,235135,72759,72297,11740,218518,104027,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,21873,50528,12496,58176,18442,75541,20334,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,12695,433256,17380,53624,547431,64381,70008,54447,14917,30962,170706,71913,66261,19143,71779,11766,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,74140,71601,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,26941,27375,66552,208884,243659,20351,20358,13518,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,380928,19882,54357,328133,71733,109332,213989,93674,50784,74424,13482,66664,24059,102857,21802!GO:0016787;hydrolase activity;0.00399859986482624;20732,245857,53893,58994,18805,433323,69274,14962,19279,21929,232714,11810,11981,23959,100340,214523,93838,23827,12370,11783,16147,13437,11847,66988,16790,14120,12368,78914,13419,54670,22361,20733,18585,17380,19211,57170,12369,239759,64899,72269,58866,268973,70008,545622,54447,66659,170750,69836,50784,19143,13482,75805,72748,545902,329910,66552,238011,72090,50528,18777,12496,104444,13809!GO:0004177;aminopeptidase activity;0.00401339511075649;170750,13437,66988,16790,13482,13809!GO:0022600;digestive system process;0.00473411381294242;22337,11808,20537,233549!GO:0016021;integral to membrane;0.00510204532185237;20732,67512,58994,235135,72759,72297,11740,218518,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,50528,12496,58176,18442,75541,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,433256,17380,53624,547431,70008,64381,54447,14917,30962,170706,71913,66261,19143,71779,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,71601,74140,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,66552,208884,243659,20351,20358,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,19882,328133,71733,109332,213989,93674,50784,13482,74424,66664,24059,102857,21802!GO:0022804;active transmembrane transporter activity;0.00510204532185237;229782,20537,15567,56485,56643,102857,171429,74338,12557,211798,110172,54670,11981,20500,68267,226999!GO:0031224;intrinsic to membrane;0.00561797434023173;20732,67512,58994,235135,72759,72297,11740,218518,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,50528,12496,58176,18442,75541,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,433256,17380,53624,547431,70008,64381,54447,14917,30962,170706,71913,66261,19143,71779,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,71601,74140,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,66552,208884,243659,20351,20358,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,19882,328133,71733,109332,213989,93674,50784,13482,74424,66664,24059,102857,21802!GO:0051179;localization;0.00594092966396084;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,15203,544817,68338,56485,11828,66809,68667,66371,72027,107375,72002,103694,20537,228368,70261,226251,15567,171429,18591,99663,18300,245944,238463,224132,17777,18643,58176,20358,13518,72825,22337,11808,20334,76561,228875,211798,110172,11981,237636,229782,13616,69259,74338,12557,72022,21428,68267,19211,69064,69159,434203,328133,14079,30962,170706,20300,19143,11766,24059,102857,69162,208092,13809!GO:0016791;phosphoric monoester hydrolase activity;0.00594092966396084;245857,50784,19211,72748,545902,18805,23827,69274,64899,19279,545622,14120,66659,23959!GO:0022857;transmembrane transporter activity;0.00759233241842231;72027,72002,103694,20537,11832,15567,56643,171429,328133,434203,99663,211798,110172,30962,20500,11981,170706,226999,229782,15203,24059,56485,102857,11828,74338,69259,12557,68667,58176,54670,68267!GO:0005886;plasma membrane;0.00868584245561449;20742,330962,11832,19279,13506,58210,218518,104027,20500,226999,224912,13139,11828,74338,69259,17063,12557,68667,60363,18260,12695,72027,69787,59290,72002,20537,380928,70261,19882,53624,15567,106766,171429,16164,99663,58804,71908,94071,13511,19143,26941,13482,27375,75599,24059,72074,102857,21873,17761,12496,58176,72058,72088,13809,18442,13518!GO:0015293;symporter activity;0.0105644895943108;229782,20537,15567,56485,56643,102857,74338,110172,20500,68267!GO:0015629;actin cytoskeleton;0.0130302958973811;360013,19882,226251,17922,71602,56226,17919,215280,65970,18643,104027,13518!GO:0006810;transport;0.0130302958973811;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,544817,15203,68338,56485,11828,68667,66371,72027,107375,72002,103694,20537,228368,70261,15567,171429,99663,18300,245944,238463,224132,17777,58176,13518,72825,11808,20334,22337,76561,228875,211798,110172,11981,237636,229782,69259,74338,12557,72022,21428,68267,69064,69159,434203,328133,14079,30962,170706,11766,24059,102857,69162,208092!GO:0005427;proton-dependent oligopeptide secondary active transmembrane transporter activity;0.0133243188083488;12557,56643!GO:0015322;secondary active oligopeptide transmembrane transporter activity;0.0133243188083488;12557,56643!GO:0030046;parallel actin filament bundle formation;0.0133243188083488;72088,56226!GO:0005783;endoplasmic reticulum;0.0142486184932871;67512,433256,20334,13076,103694,64385,18805,433323,57170,233549,23991,110172,208677,20773,212998,69836,93674,17777,66889,69162,208884,56388,70059,217356,20932,213233!GO:0051234;establishment of localization;0.0149383306589044;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,544817,15203,68338,56485,11828,66809,68667,66371,72027,107375,72002,103694,20537,228368,70261,15567,171429,99663,18300,245944,238463,224132,17777,58176,13518,72825,11808,20334,22337,76561,228875,211798,110172,11981,237636,229782,69259,74338,12557,72022,21428,68267,69064,69159,434203,328133,14079,30962,170706,11766,24059,102857,69162,208092!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0149383306589044;225115,22349,18643,20742,56226!GO:0033043;regulation of organelle organization and biogenesis;0.0149383306589044;225115,22349,18643,20742,56226!GO:0008238;exopeptidase activity;0.0149405060469004;170750,13482,11783,13437,70008,16790,66988,13809!GO:0022892;substrate-specific transporter activity;0.0159817674223635;11808,11832,56643,211798,110172,11981,226999,229782,15203,56485,11828,74338,69259,12557,68667,54670,72027,72002,20537,103694,15567,171429,99663,434203,328133,30962,170706,17777,11766,24059,102857,58176!GO:0007010;cytoskeleton organization and biogenesis;0.0172641150929153;20742,226251,71602,56226,17919,215280,18591,104027,245944,238463,170833,17922,225115,22349,17761,18643,66809,72088,13518!GO:0051128;regulation of cellular component organization and biogenesis;0.0172641150929153;225115,22349,18643,20742,56226,13518!GO:0030054;cell junction;0.0180074337368905;380928,53624,71908,13506,218518,104027,224912,13511,13482,75599,27375,21873,72058,60363,18260,13518,12695!GO:0017110;nucleoside-diphosphatase activity;0.0215610135652774;72090,53893,12496!GO:0003779;actin binding;0.0241764017947525;20742,226251,17922,17919,215280,65970,225115,22349,18643,104027,13419,13518,107684!GO:0008154;actin polymerization and/or depolymerization;0.0259374810746263;215280,225115,22349,18643,20742!GO:0046131;pyrimidine ribonucleoside metabolic process;0.0280915324732638;72269,22271!GO:0009405;pathogenesis;0.0280915324732638;13616,13615!GO:0006665;sphingolipid metabolic process;0.0308691854671346;54447,58994,53897,56632,238011!GO:0044255;cellular lipid metabolic process;0.0347386094769085;67512,433256,58994,233549,68631,54447,56362,237636,69836,17777,54200,56632,329910,238011,19013,18777,70059,55979,53897,54670!GO:0006629;lipid metabolic process;0.0387542490122346;67512,433256,58994,18805,233549,239759,68631,54447,56362,237636,69836,17777,54200,56632,329910,238011,19013,18777,70059,55979,53897,54670!GO:0016411;acylglycerol O-acyltransferase activity;0.0405596853988649;67512,55979,233549!GO:0016810;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds;0.0405596853988649;170750,72269,11847,54447,11810,78914,22361!GO:0044403;symbiosis, encompassing mutualism through parasitism;0.0474273769608356;13616,13615!GO:0044419;interspecies interaction between organisms;0.0474273769608356;13616,13615!GO:0004126;cytidine deaminase activity;0.0474273769608356;72269,11810!GO:0030693;caspase activity;0.0476421105593301;12370,12368,12369! | |gostat_on_MCL_coexpression=GO:0016020;membrane;2.28213621899327e-05;20732,67512,58994,64385,235135,18805,72759,72297,11740,218518,13728,104027,224912,215999,68338,11783,68667,217356,72431,22361,214359,72002,103694,70261,57170,171429,239759,16164,18591,58804,208677,67549,52585,13511,22035,71893,319880,75599,207839,232409,72074,21873,50528,12496,58176,18442,75541,20334,17161,17524,233549,228875,211798,58210,212070,237636,23959,66817,20459,214523,239853,16790,75604,106581,56388,170761,60363,70059,12695,433256,17380,69787,69601,53624,547431,58866,64381,70008,23991,54447,14917,30962,170706,71913,66261,19143,71779,11766,66889,72090,75212,72058,53897,13809,213233,20742,13076,11832,330962,319848,18703,433323,56643,74140,71601,19279,20500,20773,226999,12716,15203,19116,231549,353499,13139,56485,225115,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,99663,71908,66260,319565,94071,102103,73608,100038862,26941,224132,27375,66552,208884,243659,20351,20358,13518,56454,228576,71911,14367,13506,110172,21934,11981,212998,229782,83813,16147,74338,69259,72022,12557,17063,55979,18260,68267,380928,19882,54357,106766,71733,328133,109332,213989,93674,50784,74424,13482,66664,24059,102857,69162,17761,208092,72088,21802!GO:0005923;tight junction;2.28213621899327e-05;27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0043296;apical junction complex;2.28213621899327e-05;13511,27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0016327;apicolateral plasma membrane;2.61357771661251e-05;13511,27375,53624,21873,71908,60363,72058,218518,104027,18260,224912,12695!GO:0005911;intercellular junction;3.27840454069148e-05;13511,380928,13482,27375,75599,53624,21873,71908,218518,60363,72058,104027,18260,224912,12695!GO:0042578;phosphoric ester hydrolase activity;0.000206409248106748;245857,19211,58994,18805,69274,64899,19279,545622,66659,23959,50784,72748,23827,545902,238011,14120,18585!GO:0005903;brush border;0.000225711485109057;22349,58866,20537,13809,56226,226999!GO:0015291;secondary active transmembrane transporter activity;0.000844055606581827;229782,20537,15567,56485,56643,102857,171429,74338,12557,211798,110172,20500,68267,226999!GO:0008092;cytoskeletal protein binding;0.00084467365521306;20742,380928,54357,226251,17919,215280,104027,170833,17922,65970,225115,17761,18643,22349,13518,13419,107684!GO:0050892;intestinal absorption;0.00140869807324999;22337,11808,20537,233549!GO:0045177;apical part of cell;0.00142034700506896;72027,26941,20537,380928,170761,13809,224912,12695!GO:0016324;apical plasma membrane;0.00292601467977332;72027,26941,20537,380928,13809,224912!GO:0044425;membrane part;0.00399859986482624;20732,67512,58994,235135,72759,72297,11740,218518,104027,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,21873,50528,12496,58176,18442,75541,20334,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,12695,433256,17380,53624,547431,64381,70008,54447,14917,30962,170706,71913,66261,19143,71779,11766,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,74140,71601,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,26941,27375,66552,208884,243659,20351,20358,13518,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,380928,19882,54357,328133,71733,109332,213989,93674,50784,74424,13482,66664,24059,102857,21802!GO:0016787;hydrolase activity;0.00399859986482624;20732,245857,53893,58994,18805,433323,69274,14962,19279,21929,232714,11810,11981,23959,100340,214523,93838,23827,12370,11783,16147,13437,11847,66988,16790,14120,12368,78914,13419,54670,22361,20733,18585,17380,19211,57170,12369,239759,64899,72269,58866,268973,70008,545622,54447,66659,170750,69836,50784,19143,13482,75805,72748,545902,329910,66552,238011,72090,50528,18777,12496,104444,13809!GO:0004177;aminopeptidase activity;0.00401339511075649;170750,13437,66988,16790,13482,13809!GO:0022600;digestive system process;0.00473411381294242;22337,11808,20537,233549!GO:0016021;integral to membrane;0.00510204532185237;20732,67512,58994,235135,72759,72297,11740,218518,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,50528,12496,58176,18442,75541,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,433256,17380,53624,547431,70008,64381,54447,14917,30962,170706,71913,66261,19143,71779,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,71601,74140,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,66552,208884,243659,20351,20358,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,19882,328133,71733,109332,213989,93674,50784,13482,74424,66664,24059,102857,21802!GO:0022804;active transmembrane transporter activity;0.00510204532185237;229782,20537,15567,56485,56643,102857,171429,74338,12557,211798,110172,54670,11981,20500,68267,226999!GO:0031224;intrinsic to membrane;0.00561797434023173;20732,67512,58994,235135,72759,72297,11740,218518,224912,215999,68338,68667,217356,72431,214359,72002,103694,57170,171429,16164,208677,67549,13511,22035,319880,75599,207839,232409,50528,12496,58176,18442,75541,17161,233549,228875,211798,58210,212070,237636,23959,66817,214523,239853,16790,75604,56388,106581,60363,70059,433256,17380,53624,547431,70008,64381,54447,14917,30962,170706,71913,66261,19143,71779,66889,72090,75212,53897,72058,13809,213233,11832,319848,18703,433323,56643,71601,74140,19279,20500,226999,20773,15203,19116,231549,353499,56485,11828,69156,107770,20932,20352,20733,72027,59290,107375,20537,233724,228368,15567,71908,66260,94071,73608,100038862,224132,66552,208884,243659,20351,20358,228576,14367,13506,110172,21934,11981,212998,229782,69259,74338,12557,17063,72022,55979,18260,68267,19882,328133,71733,109332,213989,93674,50784,13482,74424,66664,24059,102857,21802!GO:0051179;localization;0.00594092966396084;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,15203,544817,68338,56485,11828,66809,68667,66371,72027,107375,72002,103694,20537,228368,70261,226251,15567,171429,18591,99663,18300,245944,238463,224132,17777,18643,58176,20358,13518,72825,22337,11808,20334,76561,228875,211798,110172,11981,237636,229782,13616,69259,74338,12557,72022,21428,68267,19211,69064,69159,434203,328133,14079,30962,170706,20300,19143,11766,24059,102857,69162,208092,13809!GO:0016791;phosphoric monoester hydrolase activity;0.00594092966396084;245857,50784,19211,72748,545902,18805,23827,69274,64899,19279,545622,14120,66659,23959!GO:0022857;transmembrane transporter activity;0.00759233241842231;72027,72002,103694,20537,11832,15567,56643,171429,328133,434203,99663,211798,110172,30962,20500,11981,170706,226999,229782,15203,24059,56485,102857,11828,74338,69259,12557,68667,58176,54670,68267!GO:0005886;plasma membrane;0.00868584245561449;20742,330962,11832,19279,13506,58210,218518,104027,20500,226999,224912,13139,11828,74338,69259,17063,12557,68667,60363,18260,12695,72027,69787,59290,72002,20537,380928,70261,19882,53624,15567,106766,171429,16164,99663,58804,71908,94071,13511,19143,26941,13482,27375,75599,24059,72074,102857,21873,17761,12496,58176,72058,72088,13809,18442,13518!GO:0015293;symporter activity;0.0105644895943108;229782,20537,15567,56485,56643,102857,74338,110172,20500,68267!GO:0015629;actin cytoskeleton;0.0130302958973811;360013,19882,226251,17922,71602,56226,17919,215280,65970,18643,104027,13518!GO:0006810;transport;0.0130302958973811;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,544817,15203,68338,56485,11828,68667,66371,72027,107375,72002,103694,20537,228368,70261,15567,171429,99663,18300,245944,238463,224132,17777,58176,13518,72825,11808,20334,22337,76561,228875,211798,110172,11981,237636,229782,69259,74338,12557,72022,21428,68267,69064,69159,434203,328133,14079,30962,170706,11766,24059,102857,69162,208092!GO:0005427;proton-dependent oligopeptide secondary active transmembrane transporter activity;0.0133243188083488;12557,56643!GO:0015322;secondary active oligopeptide transmembrane transporter activity;0.0133243188083488;12557,56643!GO:0030046;parallel actin filament bundle formation;0.0133243188083488;72088,56226!GO:0005783;endoplasmic reticulum;0.0142486184932871;67512,433256,20334,13076,103694,64385,18805,433323,57170,233549,23991,110172,208677,20773,212998,69836,93674,17777,66889,69162,208884,56388,70059,217356,20932,213233!GO:0051234;establishment of localization;0.0149383306589044;234683,66681,20742,330962,11832,58994,56643,215280,68942,11740,20500,226999,544817,15203,68338,56485,11828,66809,68667,66371,72027,107375,72002,103694,20537,228368,70261,15567,171429,99663,18300,245944,238463,224132,17777,58176,13518,72825,11808,20334,22337,76561,228875,211798,110172,11981,237636,229782,69259,74338,12557,72022,21428,68267,69064,69159,434203,328133,14079,30962,170706,11766,24059,102857,69162,208092!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0149383306589044;225115,22349,18643,20742,56226!GO:0033043;regulation of organelle organization and biogenesis;0.0149383306589044;225115,22349,18643,20742,56226!GO:0008238;exopeptidase activity;0.0149405060469004;170750,13482,11783,13437,70008,16790,66988,13809!GO:0022892;substrate-specific transporter activity;0.0159817674223635;11808,11832,56643,211798,110172,11981,226999,229782,15203,56485,11828,74338,69259,12557,68667,54670,72027,72002,20537,103694,15567,171429,99663,434203,328133,30962,170706,17777,11766,24059,102857,58176!GO:0007010;cytoskeleton organization and biogenesis;0.0172641150929153;20742,226251,71602,56226,17919,215280,18591,104027,245944,238463,170833,17922,225115,22349,17761,18643,66809,72088,13518!GO:0051128;regulation of cellular component organization and biogenesis;0.0172641150929153;225115,22349,18643,20742,56226,13518!GO:0030054;cell junction;0.0180074337368905;380928,53624,71908,13506,218518,104027,224912,13511,13482,75599,27375,21873,72058,60363,18260,13518,12695!GO:0017110;nucleoside-diphosphatase activity;0.0215610135652774;72090,53893,12496!GO:0003779;actin binding;0.0241764017947525;20742,226251,17922,17919,215280,65970,225115,22349,18643,104027,13419,13518,107684!GO:0008154;actin polymerization and/or depolymerization;0.0259374810746263;215280,225115,22349,18643,20742!GO:0046131;pyrimidine ribonucleoside metabolic process;0.0280915324732638;72269,22271!GO:0009405;pathogenesis;0.0280915324732638;13616,13615!GO:0006665;sphingolipid metabolic process;0.0308691854671346;54447,58994,53897,56632,238011!GO:0044255;cellular lipid metabolic process;0.0347386094769085;67512,433256,58994,233549,68631,54447,56362,237636,69836,17777,54200,56632,329910,238011,19013,18777,70059,55979,53897,54670!GO:0006629;lipid metabolic process;0.0387542490122346;67512,433256,58994,18805,233549,239759,68631,54447,56362,237636,69836,17777,54200,56632,329910,238011,19013,18777,70059,55979,53897,54670!GO:0016411;acylglycerol O-acyltransferase activity;0.0405596853988649;67512,55979,233549!GO:0016810;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds;0.0405596853988649;170750,72269,11847,54447,11810,78914,22361!GO:0044403;symbiosis, encompassing mutualism through parasitism;0.0474273769608356;13616,13615!GO:0044419;interspecies interaction between organisms;0.0474273769608356;13616,13615!GO:0004126;cytidine deaminase activity;0.0474273769608356;72269,11810!GO:0030693;caspase activity;0.0476421105593301;12370,12368,12369! | ||
|ontology_enrichment_celltype=CL:0002563!4.25e-11!9;CL:0002251!4.25e-11!9;CL:0000239!1.73e-08!6;CL:0000677!1.73e-08!6;CL:0000212!1.73e-08!6;CL:0000584!1.73e-08!6;CL:0000075!4.54e-07!7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.57e-30!47;UBERON:0000160!2.00e-30!31;UBERON:0000344!4.81e-18!15;UBERON:0001242!7.66e-16!13;UBERON:0000060!7.66e-16!13;UBERON:0001262!7.66e-16!13;UBERON:0004786!7.66e-16!13;UBERON:0004923!5.58e-12!24;UBERON:0003350!4.25e-11!9;UBERON:0004808!4.25e-11!9;UBERON:0001277!4.25e-11!9;UBERON:0000485!1.35e-08!11 | |||
}} | }} |
Revision as of 16:30, 11 October 2012
Phase1 CAGE Peaks
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
GO ID | GO name | FDR corrected p-value |
---|---|---|
GO:0016020 | membrane | 2.28213621899327e-05 |
GO:0005923 | tight junction | 2.28213621899327e-05 |
GO:0043296 | apical junction complex | 2.28213621899327e-05 |
GO:0016327 | apicolateral plasma membrane | 2.61357771661251e-05 |
GO:0005911 | intercellular junction | 3.27840454069148e-05 |
GO:0042578 | phosphoric ester hydrolase activity | 0.000206409248106748 |
GO:0005903 | brush border | 0.000225711485109057 |
GO:0015291 | secondary active transmembrane transporter activity | 0.000844055606581827 |
GO:0008092 | cytoskeletal protein binding | 0.00084467365521306 |
GO:0050892 | intestinal absorption | 0.00140869807324999 |
GO:0045177 | apical part of cell | 0.00142034700506896 |
GO:0016324 | apical plasma membrane | 0.00292601467977332 |
GO:0044425 | membrane part | 0.00399859986482624 |
GO:0016787 | hydrolase activity | 0.00399859986482624 |
GO:0004177 | aminopeptidase activity | 0.00401339511075649 |
GO:0022600 | digestive system process | 0.00473411381294242 |
GO:0016021 | integral to membrane | 0.00510204532185237 |
GO:0022804 | active transmembrane transporter activity | 0.00510204532185237 |
GO:0031224 | intrinsic to membrane | 0.00561797434023173 |
GO:0051179 | localization | 0.00594092966396084 |
GO:0016791 | phosphoric monoester hydrolase activity | 0.00594092966396084 |
GO:0022857 | transmembrane transporter activity | 0.00759233241842231 |
GO:0005886 | plasma membrane | 0.00868584245561449 |
GO:0015293 | symporter activity | 0.0105644895943108 |
GO:0015629 | actin cytoskeleton | 0.0130302958973811 |
GO:0006810 | transport | 0.0130302958973811 |
GO:0005427 | proton-dependent oligopeptide secondary active transmembrane transporter activity | 0.0133243188083488 |
GO:0015322 | secondary active oligopeptide transmembrane transporter activity | 0.0133243188083488 |
GO:0030046 | parallel actin filament bundle formation | 0.0133243188083488 |
GO:0005783 | endoplasmic reticulum | 0.0142486184932871 |
GO:0051234 | establishment of localization | 0.0149383306589044 |
GO:0051493 | regulation of cytoskeleton organization and biogenesis | 0.0149383306589044 |
GO:0033043 | regulation of organelle organization and biogenesis | 0.0149383306589044 |
GO:0008238 | exopeptidase activity | 0.0149405060469004 |
GO:0022892 | substrate-specific transporter activity | 0.0159817674223635 |
GO:0007010 | cytoskeleton organization and biogenesis | 0.0172641150929153 |
GO:0051128 | regulation of cellular component organization and biogenesis | 0.0172641150929153 |
GO:0030054 | cell junction | 0.0180074337368905 |
GO:0017110 | nucleoside-diphosphatase activity | 0.0215610135652774 |
GO:0003779 | actin binding | 0.0241764017947525 |
GO:0008154 | actin polymerization and/or depolymerization | 0.0259374810746263 |
GO:0046131 | pyrimidine ribonucleoside metabolic process | 0.0280915324732638 |
GO:0009405 | pathogenesis | 0.0280915324732638 |
GO:0006665 | sphingolipid metabolic process | 0.0308691854671346 |
GO:0044255 | cellular lipid metabolic process | 0.0347386094769085 |
GO:0006629 | lipid metabolic process | 0.0387542490122346 |
GO:0016411 | acylglycerol O-acyltransferase activity | 0.0405596853988649 |
GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 0.0405596853988649 |
GO:0044403 | symbiosis, encompassing mutualism through parasitism | 0.0474273769608356 |
GO:0044419 | interspecies interaction between organisms | 0.0474273769608356 |
GO:0004126 | cytidine deaminase activity | 0.0474273769608356 |
GO:0030693 | caspase activity | 0.0476421105593301 |
Relative expression of the co-expression cluster over median <br>Analyst:
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.25e-11 | 9 |
epithelial cell of alimentary canal | 4.25e-11 | 9 |
brush border epithelial cell | 1.73e-08 | 6 |
gut absorptive cell | 1.73e-08 | 6 |
absorptive cell | 1.73e-08 | 6 |
enterocyte | 1.73e-08 | 6 |
columnar/cuboidal epithelial cell | 4.54e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.57e-30 | 47 |
intestine | 2.00e-30 | 31 |
mucosa | 4.81e-18 | 15 |
intestinal mucosa | 7.66e-16 | 13 |
anatomical wall | 7.66e-16 | 13 |
wall of intestine | 7.66e-16 | 13 |
gastrointestinal system mucosa | 7.66e-16 | 13 |
organ component layer | 5.58e-12 | 24 |
epithelium of mucosa | 4.25e-11 | 9 |
gastrointestinal system epithelium | 4.25e-11 | 9 |
intestinal epithelium | 4.25e-11 | 9 |
simple columnar epithelium | 1.35e-08 | 11 |
TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
{{{tfbs_overrepresentation_jaspar}}} |